RNA–Protein interactions for RNA: ENST00000275767.3

TMEM140-201, Transcript of transmembrane protein 140, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM140, Length 1,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM140-201ENST00000275767 NISCHQ9Y2I1 1504 aa37.77■■■■□ 3.64
TMEM140-201ENST00000275767 CCDC180Q9P1Z9 1646 aa33.32■■■□□ 2.93
TMEM140-201ENST00000275767 ABCC9O60706 1549 aa31.76■■■□□ 2.67
TMEM140-201ENST00000275767 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
TMEM140-201ENST00000275767 DCAF1Q9Y4B6 1507 aa31.3■■■□□ 2.6
TMEM140-201ENST00000275767 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
TMEM140-201ENST00000275767 MYO15BQ96JP2 1530 aa31.14■■■□□ 2.58
TMEM140-201ENST00000275767 NACADO15069 1562 aa31.08■■■□□ 2.57
TMEM140-201ENST00000275767 RB1CC1Q8TDY2 1594 aa30.94■■■□□ 2.54
TMEM140-201ENST00000275767 SCRIBQ14160 1630 aa30.44■■■□□ 2.46
TMEM140-201ENST00000275767 UNC13AQ9UPW8 1703 aa30.34■■■□□ 2.45
TMEM140-201ENST00000275767 SHROOM4Q9ULL8 1493 aa30.3■■■□□ 2.44
TMEM140-201ENST00000275767 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
TMEM140-201ENST00000275767 PABPN1Q86U42 306 aaKnown RBP eCLIP29.75■■■□□ 2.35
TMEM140-201ENST00000275767 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
TMEM140-201ENST00000275767 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.27
TMEM140-201ENST00000275767 SMARCA4P51532 1647 aa29.19■■■□□ 2.26
TMEM140-201ENST00000275767 EIF4G1Q04637 1599 aaKnown RBP29.12■■■□□ 2.25
TMEM140-201ENST00000275767 MROH2BQ7Z745 1585 aa29.12■■■□□ 2.25
TMEM140-201ENST00000275767 RSF1Q96T23 1441 aaPredicted RBP29.04■■■□□ 2.24
TMEM140-201ENST00000275767 WIZO95785 1651 aa28.89■■■□□ 2.22
TMEM140-201ENST00000275767 PEG3Q9GZU2 1588 aa28.88■■■□□ 2.21
TMEM140-201ENST00000275767 SUPT5HO00267 1087 aaKnown RBP28.87■■■□□ 2.21
TMEM140-201ENST00000275767 SMARCA2P51531 1590 aa28.82■■■□□ 2.2
TMEM140-201ENST00000275767 CC2D2AQ9P2K1 1620 aa28.82■■■□□ 2.2
TMEM140-201ENST00000275767 ATAD2BQ9ULI0 1458 aa28.77■■■□□ 2.2
TMEM140-201ENST00000275767 HMGXB3Q12766 1538 aa28.62■■■□□ 2.17
TMEM140-201ENST00000275767 NCAPD3P42695 1498 aa28.62■■■□□ 2.17
TMEM140-201ENST00000275767 TOP2AP11388 1531 aaKnown RBP28.62■■■□□ 2.17
TMEM140-201ENST00000275767 BAZ1BQ9UIG0 1483 aaKnown RBP28.61■■■□□ 2.17
TMEM140-201ENST00000275767 DNAJC5BQ9UF47 199 aa28.35■■■□□ 2.13
TMEM140-201ENST00000275767 CCDC88BA6NC98 1476 aa28.23■■■□□ 2.11
TMEM140-201ENST00000275767 PRDM2Q13029 1718 aa27.86■■■□□ 2.05
TMEM140-201ENST00000275767 CFTRP13569 1480 aa27.85■■■□□ 2.05
TMEM140-201ENST00000275767 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
TMEM140-201ENST00000275767 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
TMEM140-201ENST00000275767 NESP48681 1621 aa27.72■■■□□ 2.03
TMEM140-201ENST00000275767 PDS5BQ9NTI5 1447 aa27.54■■■□□ 2
TMEM140-201ENST00000275767 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
TMEM140-201ENST00000275767 KIF21AQ7Z4S6 1674 aa27.51■■□□□ 1.99
TMEM140-201ENST00000275767 ABCC8Q09428 1581 aa27.49■■□□□ 1.99
TMEM140-201ENST00000275767 CEP164Q9UPV0 1460 aa27.46■■□□□ 1.99
TMEM140-201ENST00000275767 WRNQ14191 1432 aaPredicted RBP eCLIP27.38■■□□□ 1.97
TMEM140-201ENST00000275767 CHIC1Q5VXU3 224 aa27.38■■□□□ 1.97
TMEM140-201ENST00000275767 ERCC6Q03468 1493 aa27.34■■□□□ 1.97
TMEM140-201ENST00000275767 SYNJ1O43426 1573 aa27.32■■□□□ 1.96
TMEM140-201ENST00000275767 BIVM-ERCC5R4GMW8 1640 aa27.3■■□□□ 1.96
TMEM140-201ENST00000275767 TOP2BQ02880 1626 aa27.29■■□□□ 1.96
TMEM140-201ENST00000275767 CUX1P39880 1505 aa27.28■■□□□ 1.96
TMEM140-201ENST00000275767 DNMBPQ6XZF7 1577 aa27.26■■□□□ 1.95
TMEM140-201ENST00000275767 MRC2Q9UBG0 1479 aa27.23■■□□□ 1.95
TMEM140-201ENST00000275767 TRIM41Q8WV44 630 aa27.23■■□□□ 1.95
TMEM140-201ENST00000275767 URB2Q14146 1524 aaKnown RBP27.22■■□□□ 1.95
TMEM140-201ENST00000275767 THOC2Q8NI27 1593 aaKnown RBP27.2■■□□□ 1.94
TMEM140-201ENST00000275767 TOPBP1Q92547 1522 aa27.19■■□□□ 1.94
TMEM140-201ENST00000275767 WDR62O43379 1518 aa27.15■■□□□ 1.94
TMEM140-201ENST00000275767 FGD5Q6ZNL6 1462 aa27.07■■□□□ 1.92
TMEM140-201ENST00000275767 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
TMEM140-201ENST00000275767 WDR97A6NE52 1622 aa26.89■■□□□ 1.9
TMEM140-201ENST00000275767 SOGA1O94964 1423 aa26.88■■□□□ 1.89
TMEM140-201ENST00000275767 CUX2O14529 1486 aa26.87■■□□□ 1.89
TMEM140-201ENST00000275767 TARBP1Q13395 1621 aaKnown RBP26.87■■□□□ 1.89
TMEM140-201ENST00000275767 RAD54L2Q9Y4B4 1467 aa26.86■■□□□ 1.89
TMEM140-201ENST00000275767 ABCA10Q8WWZ4 1543 aa26.84■■□□□ 1.89
TMEM140-201ENST00000275767 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
TMEM140-201ENST00000275767 EEA1Q15075 1411 aa26.77■■□□□ 1.88
TMEM140-201ENST00000275767 KIF27Q86VH2 1401 aa26.75■■□□□ 1.87
TMEM140-201ENST00000275767 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
TMEM140-201ENST00000275767 ABCA5Q8WWZ7 1642 aa26.71■■□□□ 1.87
TMEM140-201ENST00000275767 FAM9AQ8IZU1 332 aaPredicted RBP26.64■■□□□ 1.86
TMEM140-201ENST00000275767 EIF4G3O43432 1585 aaKnown RBP26.64■■□□□ 1.85
TMEM140-201ENST00000275767 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
TMEM140-201ENST00000275767 TDRD9Q8NDG6 1382 aaKnown RBP26.62■■□□□ 1.85
TMEM140-201ENST00000275767 GAPVD1Q14C86 1478 aa26.62■■□□□ 1.85
TMEM140-201ENST00000275767 PBRM1Q86U86 1689 aa26.61■■□□□ 1.85
TMEM140-201ENST00000275767 AQRO60306 1485 aaKnown RBP eCLIP26.56■■□□□ 1.84
TMEM140-201ENST00000275767 ERICH3Q5RHP9 1530 aa26.56■■□□□ 1.84
TMEM140-201ENST00000275767 CSRNP3Q8WYN3 585 aa26.54■■□□□ 1.84
TMEM140-201ENST00000275767 CUL7Q14999 1698 aa26.52■■□□□ 1.84
TMEM140-201ENST00000275767 GRIN2BQ13224 1484 aa26.5■■□□□ 1.83
TMEM140-201ENST00000275767 IGF1RP08069 1367 aa26.49■■□□□ 1.83
TMEM140-201ENST00000275767 KIF21BO75037 1637 aa26.48■■□□□ 1.83
TMEM140-201ENST00000275767 PRXQ9BXM0 1461 aa26.43■■□□□ 1.82
TMEM140-201ENST00000275767 ADAMTS12P58397 1594 aa26.4■■□□□ 1.82
TMEM140-201ENST00000275767 SNAPC4Q5SXM2 1469 aa26.37■■□□□ 1.81
TMEM140-201ENST00000275767 MAGI1Q96QZ7 1491 aaPredicted RBP26.37■■□□□ 1.81
TMEM140-201ENST00000275767 CARMIL1Q5VZK9 1371 aa26.37■■□□□ 1.81
TMEM140-201ENST00000275767 GOLGA3Q08378 1498 aa26.35■■□□□ 1.81
TMEM140-201ENST00000275767 RAPGEF2Q9Y4G8 1499 aa26.34■■□□□ 1.81
TMEM140-201ENST00000275767 FHAD1B1AJZ9 1412 aa26.32■■□□□ 1.8
TMEM140-201ENST00000275767 SYNJ2O15056 1496 aa26.24■■□□□ 1.79
TMEM140-201ENST00000275767 LOC105371045A0A1W2PR82 267 aa26.24■■□□□ 1.79
TMEM140-201ENST00000275767 EHMT2Q96KQ7 1210 aa26.24■■□□□ 1.79
TMEM140-201ENST00000275767 GRIN2AQ12879 1464 aa26.18■■□□□ 1.78
TMEM140-201ENST00000275767 CHD1O14646 1710 aa26.18■■□□□ 1.78
TMEM140-201ENST00000275767 CTTNBP2Q8WZ74 1663 aa26.17■■□□□ 1.78
TMEM140-201ENST00000275767 UBTFP17480 764 aaKnown RBP26.15■■□□□ 1.78
TMEM140-201ENST00000275767 CHMP7Q8WUX9 453 aaPredicted RBP26.12■■□□□ 1.77
TMEM140-201ENST00000275767 TNIKQ9UKE5 1360 aa26.12■■□□□ 1.77
TMEM140-201ENST00000275767 FBLN2P98095 1184 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms