RNA–Protein interactions for RNA: ENST00000275575.11

PHTF2-202, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-202ENST00000275575 NISCHQ9Y2I1 1504 aa10.36□□□□□ -0.75
PHTF2-202ENST00000275575 CCDC180Q9P1Z9 1646 aa9.64□□□□□ -0.87
PHTF2-202ENST00000275575 UNC13AQ9UPW8 1703 aa9.29□□□□□ -0.92
PHTF2-202ENST00000275575 BICRAQ9NZM4 1560 aa9□□□□□ -0.97
PHTF2-202ENST00000275575 MYO15BQ96JP2 1530 aa9□□□□□ -0.97
PHTF2-202ENST00000275575 DCAF1Q9Y4B6 1507 aa8.84□□□□□ -0.99
PHTF2-202ENST00000275575 ABCC9O60706 1549 aa8.82□□□□□ -1
PHTF2-202ENST00000275575 NACADO15069 1562 aa8.79□□□□□ -1
PHTF2-202ENST00000275575 RB1CC1Q8TDY2 1594 aa8.71□□□□□ -1.01
PHTF2-202ENST00000275575 ZCCHC6Q5VYS8 1495 aaKnown RBP8.71□□□□□ -1.02
PHTF2-202ENST00000275575 SHROOM4Q9ULL8 1493 aa8.65□□□□□ -1.02
PHTF2-202ENST00000275575 DNAJC5BQ9UF47 199 aa8.57□□□□□ -1.04
PHTF2-202ENST00000275575 CC2D2AQ9P2K1 1620 aa8.42□□□□□ -1.06
PHTF2-202ENST00000275575 EIF4G1Q04637 1599 aaKnown RBP8.41□□□□□ -1.06
PHTF2-202ENST00000275575 PEG3Q9GZU2 1588 aa8.4□□□□□ -1.06
PHTF2-202ENST00000275575 SCRIBQ14160 1630 aa8.27□□□□□ -1.09
PHTF2-202ENST00000275575 THOC2Q8NI27 1593 aaKnown RBP8.22□□□□□ -1.09
PHTF2-202ENST00000275575 PRDM2Q13029 1718 aa8.2□□□□□ -1.1
PHTF2-202ENST00000275575 SMARCA4P51532 1647 aa8.17□□□□□ -1.1
PHTF2-202ENST00000275575 HMGXB3Q12766 1538 aa8.17□□□□□ -1.1
PHTF2-202ENST00000275575 KIF21AQ7Z4S6 1674 aa8.09□□□□□ -1.11
PHTF2-202ENST00000275575 NCAPD3P42695 1498 aa8.09□□□□□ -1.11
PHTF2-202ENST00000275575 SMARCA2P51531 1590 aa8.06□□□□□ -1.12
PHTF2-202ENST00000275575 CECR2Q9BXF3 1484 aa8.02□□□□□ -1.13
PHTF2-202ENST00000275575 ATAD2BQ9ULI0 1458 aa8□□□□□ -1.13
PHTF2-202ENST00000275575 MROH2BQ7Z745 1585 aa7.97□□□□□ -1.13
PHTF2-202ENST00000275575 WIZO95785 1651 aa7.95□□□□□ -1.14
PHTF2-202ENST00000275575 WDR97A6NE52 1622 aa7.94□□□□□ -1.14
PHTF2-202ENST00000275575 LAMC3Q9Y6N6 1575 aa7.93□□□□□ -1.14
PHTF2-202ENST00000275575 WDR62O43379 1518 aa7.93□□□□□ -1.14
PHTF2-202ENST00000275575 PABPN1Q86U42 306 aaKnown RBP eCLIP7.92□□□□□ -1.14
PHTF2-202ENST00000275575 BAZ1AQ9NRL2 1556 aaPredicted RBP7.91□□□□□ -1.14
PHTF2-202ENST00000275575 CUX2O14529 1486 aa7.9□□□□□ -1.15
PHTF2-202ENST00000275575 NESP48681 1621 aa7.84□□□□□ -1.15
PHTF2-202ENST00000275575 TARBP1Q13395 1621 aaKnown RBP7.83□□□□□ -1.16
PHTF2-202ENST00000275575 TOP2AP11388 1531 aaKnown RBP7.78□□□□□ -1.16
PHTF2-202ENST00000275575 CFTRP13569 1480 aa7.75□□□□□ -1.17
PHTF2-202ENST00000275575 URB2Q14146 1524 aaKnown RBP7.72□□□□□ -1.17
PHTF2-202ENST00000275575 RSF1Q96T23 1441 aaPredicted RBP7.68□□□□□ -1.18
PHTF2-202ENST00000275575 CHD1O14646 1710 aa7.65□□□□□ -1.18
PHTF2-202ENST00000275575 CLASP1Q7Z460 1538 aa7.64□□□□□ -1.19
PHTF2-202ENST00000275575 SHROOM2Q13796 1616 aa7.64□□□□□ -1.19
PHTF2-202ENST00000275575 ABCA5Q8WWZ7 1642 aa7.64□□□□□ -1.19
PHTF2-202ENST00000275575 BAZ1BQ9UIG0 1483 aaKnown RBP7.64□□□□□ -1.19
PHTF2-202ENST00000275575 BIVM-ERCC5R4GMW8 1640 aa7.63□□□□□ -1.19
PHTF2-202ENST00000275575 EIF4G3O43432 1585 aaKnown RBP7.62□□□□□ -1.19
PHTF2-202ENST00000275575 DNAJC5Q9H3Z4 198 aa7.61□□□□□ -1.19
PHTF2-202ENST00000275575 PBRM1Q86U86 1689 aa7.61□□□□□ -1.19
PHTF2-202ENST00000275575 MRC2Q9UBG0 1479 aa7.59□□□□□ -1.19
PHTF2-202ENST00000275575 RIMBP3CA6NJZ7 1639 aa7.58□□□□□ -1.2
PHTF2-202ENST00000275575 RIMBP3BA6NNM3 1639 aa7.58□□□□□ -1.2
PHTF2-202ENST00000275575 RIMBP3Q9UFD9 1639 aa7.58□□□□□ -1.2
PHTF2-202ENST00000275575 CCDC88BA6NC98 1476 aa7.56□□□□□ -1.2
PHTF2-202ENST00000275575 DNMBPQ6XZF7 1577 aa7.55□□□□□ -1.2
PHTF2-202ENST00000275575 CADPSQ9ULU8 1353 aa7.55□□□□□ -1.2
PHTF2-202ENST00000275575 KIF13AQ9H1H9 1805 aa7.54□□□□□ -1.2
PHTF2-202ENST00000275575 CUX1P39880 1505 aa7.51□□□□□ -1.21
PHTF2-202ENST00000275575 TOPBP1Q92547 1522 aa7.51□□□□□ -1.21
PHTF2-202ENST00000275575 FANCD2Q9BXW9 1451 aa7.49□□□□□ -1.21
PHTF2-202ENST00000275575 ZNF608Q9ULD9 1512 aaPredicted RBP7.49□□□□□ -1.21
PHTF2-202ENST00000275575 PPRC1Q5VV67 1664 aaKnown RBP7.48□□□□□ -1.21
PHTF2-202ENST00000275575 TOP2BQ02880 1626 aa7.44□□□□□ -1.22
PHTF2-202ENST00000275575 CEP164Q9UPV0 1460 aa7.43□□□□□ -1.22
PHTF2-202ENST00000275575 SYNJ1O43426 1573 aa7.42□□□□□ -1.22
PHTF2-202ENST00000275575 POLA1P09884 1462 aaPredicted RBP7.42□□□□□ -1.22
PHTF2-202ENST00000275575 CEP170Q5SW79 1584 aa7.41□□□□□ -1.22
PHTF2-202ENST00000275575 ADAMTS12P58397 1594 aa7.4□□□□□ -1.22
PHTF2-202ENST00000275575 PDS5BQ9NTI5 1447 aa7.4□□□□□ -1.22
PHTF2-202ENST00000275575 ERCC6L2Q5T890 1561 aa7.39□□□□□ -1.23
PHTF2-202ENST00000275575 ARHGEF11O15085 1522 aa7.38□□□□□ -1.23
PHTF2-202ENST00000275575 RUSC2Q8N2Y8 1516 aa7.38□□□□□ -1.23
PHTF2-202ENST00000275575 ARAP1Q96P48 1450 aa7.37□□□□□ -1.23
PHTF2-202ENST00000275575 IFT140Q96RY7 1462 aa7.37□□□□□ -1.23
PHTF2-202ENST00000275575 ABCA10Q8WWZ4 1543 aa7.36□□□□□ -1.23
PHTF2-202ENST00000275575 ABCC8Q09428 1581 aa7.31□□□□□ -1.24
PHTF2-202ENST00000275575 ERCC6Q03468 1493 aa7.31□□□□□ -1.24
PHTF2-202ENST00000275575 NUP160Q12769 1436 aa7.3□□□□□ -1.24
PHTF2-202ENST00000275575 ADCY10Q96PN6 1610 aa7.29□□□□□ -1.24
PHTF2-202ENST00000275575 LRRIQ1Q96JM4 1722 aa7.27□□□□□ -1.24
PHTF2-202ENST00000275575 FGD5Q6ZNL6 1462 aa7.27□□□□□ -1.25
PHTF2-202ENST00000275575 ERICH3Q5RHP9 1530 aa7.27□□□□□ -1.25
PHTF2-202ENST00000275575 SIGLEC1Q9BZZ2 1709 aa7.26□□□□□ -1.25
PHTF2-202ENST00000275575 MAGI1Q96QZ7 1491 aaPredicted RBP7.26□□□□□ -1.25
PHTF2-202ENST00000275575 RAD54L2Q9Y4B4 1467 aa7.25□□□□□ -1.25
PHTF2-202ENST00000275575 MAP3K4Q9Y6R4 1608 aa7.23□□□□□ -1.25
PHTF2-202ENST00000275575 DCAF8L2P0C7V8 631 aa7.22□□□□□ -1.25
PHTF2-202ENST00000275575 DIP2BQ9P265 1576 aa7.21□□□□□ -1.26
PHTF2-202ENST00000275575 CUL7Q14999 1698 aa7.2□□□□□ -1.26
PHTF2-202ENST00000275575 MAPKBP1O60336 1514 aa7.2□□□□□ -1.26
PHTF2-202ENST00000275575 SYNJ2O15056 1496 aa7.19□□□□□ -1.26
PHTF2-202ENST00000275575 CTTNBP2Q8WZ74 1663 aa7.19□□□□□ -1.26
PHTF2-202ENST00000275575 AQRO60306 1485 aaKnown RBP eCLIP7.19□□□□□ -1.263e-7■■■■■ 36.6
PHTF2-202ENST00000275575 SNAPC4Q5SXM2 1469 aa7.19□□□□□ -1.26
PHTF2-202ENST00000275575 KDM5BQ9UGL1 1544 aa7.17□□□□□ -1.26
PHTF2-202ENST00000275575 GRIN2AQ12879 1464 aa7.16□□□□□ -1.26
PHTF2-202ENST00000275575 GLI2P10070 1586 aa7.16□□□□□ -1.26
PHTF2-202ENST00000275575 SAMD9Q5K651 1589 aa7.14□□□□□ -1.27
PHTF2-202ENST00000275575 GRIN2BQ13224 1484 aa7.13□□□□□ -1.27
PHTF2-202ENST00000275575 DISP1Q96F81 1524 aa7.12□□□□□ -1.27
PHTF2-202ENST00000275575 ABCC2Q92887 1545 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms