RNA–Protein interactions for RNA: ENST00000272879.9

CASP10-201, Transcript of caspase 10, humanhuman

TSL 2 BASIC

Gene CASP10, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP10-201ENST00000272879 NISCHQ9Y2I1 1504 aa18.38■□□□□ 0.53
CASP10-201ENST00000272879 CCDC180Q9P1Z9 1646 aa16.17■□□□□ 0.18
CASP10-201ENST00000272879 CHIC1Q5VXU3 224 aa16.07■□□□□ 0.16
CASP10-201ENST00000272879 ABCC9O60706 1549 aa15.68■□□□□ 0.1
CASP10-201ENST00000272879 AEBP2Q6ZN18 517 aaPredicted RBP15.52■□□□□ 0.08
CASP10-201ENST00000272879 DCAF8L2P0C7V8 631 aa15.36■□□□□ 0.05
CASP10-201ENST00000272879 ZCCHC6Q5VYS8 1495 aaKnown RBP15.36■□□□□ 0.05
CASP10-201ENST00000272879 DCAF1Q9Y4B6 1507 aa15.13■□□□□ 0.01
CASP10-201ENST00000272879 NACADO15069 1562 aa15.13■□□□□ 0.01
CASP10-201ENST00000272879 RB1CC1Q8TDY2 1594 aa15.09■□□□□ 0.01
CASP10-201ENST00000272879 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
CASP10-201ENST00000272879 UNC13AQ9UPW8 1703 aa14.89□□□□□ -0.03
CASP10-201ENST00000272879 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
CASP10-201ENST00000272879 SHROOM4Q9ULL8 1493 aa14.83□□□□□ -0.03
CASP10-201ENST00000272879 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
CASP10-201ENST00000272879 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
CASP10-201ENST00000272879 CECR2Q9BXF3 1484 aa14.37□□□□□ -0.11
CASP10-201ENST00000272879 PHF23Q9BUL5 403 aaPredicted RBP14.33□□□□□ -0.12
CASP10-201ENST00000272879 EIF4G1Q04637 1599 aaKnown RBP14.27□□□□□ -0.12
CASP10-201ENST00000272879 MROH2BQ7Z745 1585 aa14.23□□□□□ -0.13
CASP10-201ENST00000272879 SMARCA4P51532 1647 aa14.22□□□□□ -0.13
CASP10-201ENST00000272879 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
CASP10-201ENST00000272879 BAZ1AQ9NRL2 1556 aaPredicted RBP14.19□□□□□ -0.14
CASP10-201ENST00000272879 CC2D2AQ9P2K1 1620 aa14.17□□□□□ -0.14
CASP10-201ENST00000272879 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
CASP10-201ENST00000272879 WIZO95785 1651 aa14.12□□□□□ -0.15
CASP10-201ENST00000272879 SUPT5HO00267 1087 aaKnown RBP14.08□□□□□ -0.16
CASP10-201ENST00000272879 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
CASP10-201ENST00000272879 PEG3Q9GZU2 1588 aa14.02□□□□□ -0.16
CASP10-201ENST00000272879 SMARCA2P51531 1590 aa14□□□□□ -0.17
CASP10-201ENST00000272879 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
CASP10-201ENST00000272879 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
CASP10-201ENST00000272879 HMGXB3Q12766 1538 aa13.91□□□□□ -0.18
CASP10-201ENST00000272879 TOP2AP11388 1531 aaKnown RBP13.89□□□□□ -0.19
CASP10-201ENST00000272879 CCDC88BA6NC98 1476 aa13.77□□□□□ -0.2
CASP10-201ENST00000272879 NESP48681 1621 aa13.68□□□□□ -0.22
CASP10-201ENST00000272879 CADPSQ9ULU8 1353 aa13.6□□□□□ -0.23
CASP10-201ENST00000272879 CFTRP13569 1480 aa13.58□□□□□ -0.24
CASP10-201ENST00000272879 LAMC3Q9Y6N6 1575 aa13.55□□□□□ -0.24
CASP10-201ENST00000272879 EHMT2Q96KQ7 1210 aa13.54□□□□□ -0.24
CASP10-201ENST00000272879 PRDM2Q13029 1718 aa13.52□□□□□ -0.25
CASP10-201ENST00000272879 PLPPR3Q6T4P5 718 aa13.51□□□□□ -0.25
CASP10-201ENST00000272879 KIF21AQ7Z4S6 1674 aa13.5□□□□□ -0.25
CASP10-201ENST00000272879 FANCD2Q9BXW9 1451 aa13.46□□□□□ -0.25
CASP10-201ENST00000272879 PDS5BQ9NTI5 1447 aa13.45□□□□□ -0.26
CASP10-201ENST00000272879 ERCC6Q03468 1493 aa13.43□□□□□ -0.26
CASP10-201ENST00000272879 ABCC8Q09428 1581 aa13.42□□□□□ -0.26
CASP10-201ENST00000272879 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.27
CASP10-201ENST00000272879 URB2Q14146 1524 aaKnown RBP13.34□□□□□ -0.27
CASP10-201ENST00000272879 THOC2Q8NI27 1593 aaKnown RBP13.34□□□□□ -0.27
CASP10-201ENST00000272879 CUX1P39880 1505 aa13.32□□□□□ -0.28
CASP10-201ENST00000272879 MRC2Q9UBG0 1479 aa13.32□□□□□ -0.28
CASP10-201ENST00000272879 SYNJ1O43426 1573 aa13.31□□□□□ -0.28
CASP10-201ENST00000272879 WRNQ14191 1432 aaPredicted RBP eCLIP13.29□□□□□ -0.28
CASP10-201ENST00000272879 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
CASP10-201ENST00000272879 WDR62O43379 1518 aa13.27□□□□□ -0.29
CASP10-201ENST00000272879 DNMBPQ6XZF7 1577 aa13.27□□□□□ -0.29
CASP10-201ENST00000272879 TOP2BQ02880 1626 aa13.23□□□□□ -0.29
CASP10-201ENST00000272879 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
CASP10-201ENST00000272879 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.29
CASP10-201ENST00000272879 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
CASP10-201ENST00000272879 POLA1P09884 1462 aaPredicted RBP13.2□□□□□ -0.3
CASP10-201ENST00000272879 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
CASP10-201ENST00000272879 CUX2O14529 1486 aa13.19□□□□□ -0.3
CASP10-201ENST00000272879 SOGA1O94964 1423 aa13.14□□□□□ -0.31
CASP10-201ENST00000272879 TARBP1Q13395 1621 aaKnown RBP13.13□□□□□ -0.31
CASP10-201ENST00000272879 ZNF608Q9ULD9 1512 aaPredicted RBP13.11□□□□□ -0.31
CASP10-201ENST00000272879 WDR97A6NE52 1622 aa13.09□□□□□ -0.31
CASP10-201ENST00000272879 IFT140Q96RY7 1462 aa13.09□□□□□ -0.31
CASP10-201ENST00000272879 TDRD9Q8NDG6 1382 aaKnown RBP13.08□□□□□ -0.32
CASP10-201ENST00000272879 RUSC2Q8N2Y8 1516 aa13.08□□□□□ -0.32
CASP10-201ENST00000272879 AQRO60306 1485 aaKnown RBP eCLIP13.07□□□□□ -0.327e-14■■■■■ 33.4
CASP10-201ENST00000272879 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
CASP10-201ENST00000272879 KCNA4P22459 653 aa13.05□□□□□ -0.32
CASP10-201ENST00000272879 FAM9AQ8IZU1 332 aaPredicted RBP13.03□□□□□ -0.32
CASP10-201ENST00000272879 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
CASP10-201ENST00000272879 ABCA5Q8WWZ7 1642 aa13.01□□□□□ -0.33
CASP10-201ENST00000272879 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
CASP10-201ENST00000272879 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
CASP10-201ENST00000272879 SENP3Q9H4L4 574 aaPredicted RBP12.97□□□□□ -0.33
CASP10-201ENST00000272879 KIF27Q86VH2 1401 aa12.97□□□□□ -0.33
CASP10-201ENST00000272879 IGF1RP08069 1367 aa12.93□□□□□ -0.34
CASP10-201ENST00000272879 GRIN2BQ13224 1484 aa12.92□□□□□ -0.34
CASP10-201ENST00000272879 SNAPC4Q5SXM2 1469 aa12.91□□□□□ -0.34
CASP10-201ENST00000272879 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
CASP10-201ENST00000272879 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
CASP10-201ENST00000272879 SLC24A1O60721 1099 aa12.87□□□□□ -0.35
CASP10-201ENST00000272879 FBLN2P98095 1184 aa12.86□□□□□ -0.35
CASP10-201ENST00000272879 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
CASP10-201ENST00000272879 EEA1Q15075 1411 aa12.85□□□□□ -0.35
CASP10-201ENST00000272879 CHD1O14646 1710 aa12.84□□□□□ -0.35
CASP10-201ENST00000272879 CARMIL1Q5VZK9 1371 aa12.84□□□□□ -0.35
CASP10-201ENST00000272879 MAGI1Q96QZ7 1491 aaPredicted RBP12.84□□□□□ -0.35
CASP10-201ENST00000272879 CUL7Q14999 1698 aa12.82□□□□□ -0.36
CASP10-201ENST00000272879 PRXQ9BXM0 1461 aa12.82□□□□□ -0.36
CASP10-201ENST00000272879 FHAD1B1AJZ9 1412 aa12.82□□□□□ -0.36
CASP10-201ENST00000272879 CHMP7Q8WUX9 453 aaPredicted RBP12.81□□□□□ -0.36
CASP10-201ENST00000272879 SYNJ2O15056 1496 aa12.81□□□□□ -0.36
CASP10-201ENST00000272879 RAPGEF2Q9Y4G8 1499 aa12.81□□□□□ -0.36
CASP10-201ENST00000272879 LOC105371045A0A1W2PR82 267 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms