RNA–Protein interactions for RNA: ENST00000269349.7

EIF4A3-201, Transcript of eukaryotic translation initiation factor 4A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF4A3, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A3-201ENST00000269349 NISCHQ9Y2I1 1504 aa38.75■■■■□ 3.79
EIF4A3-201ENST00000269349 CCDC180Q9P1Z9 1646 aa33.9■■■■□ 3.02
EIF4A3-201ENST00000269349 ZCCHC6Q5VYS8 1495 aaKnown RBP32.53■■■□□ 2.8
EIF4A3-201ENST00000269349 ABCC9O60706 1549 aa32.13■■■□□ 2.73
EIF4A3-201ENST00000269349 DCAF1Q9Y4B6 1507 aa32.03■■■□□ 2.72
EIF4A3-201ENST00000269349 DCAF8L2P0C7V8 631 aa32■■■□□ 2.71
EIF4A3-201ENST00000269349 MYO15BQ96JP2 1530 aa31.67■■■□□ 2.66
EIF4A3-201ENST00000269349 NACADO15069 1562 aa31.55■■■□□ 2.64
EIF4A3-201ENST00000269349 SHROOM4Q9ULL8 1493 aa31.54■■■□□ 2.64
EIF4A3-201ENST00000269349 RB1CC1Q8TDY2 1594 aa31.32■■■□□ 2.6
EIF4A3-201ENST00000269349 SCRIBQ14160 1630 aa31.15■■■□□ 2.58
EIF4A3-201ENST00000269349 UNC13AQ9UPW8 1703 aa30.81■■■□□ 2.52
EIF4A3-201ENST00000269349 BICRAQ9NZM4 1560 aa30.42■■■□□ 2.46
EIF4A3-201ENST00000269349 SUPT5HO00267 1087 aaKnown RBP30.25■■■□□ 2.43
EIF4A3-201ENST00000269349 PABPN1Q86U42 306 aaKnown RBP eCLIP30.25■■■□□ 2.43
EIF4A3-201ENST00000269349 CECR2Q9BXF3 1484 aa30.14■■■□□ 2.42
EIF4A3-201ENST00000269349 RSF1Q96T23 1441 aaPredicted RBP30■■■□□ 2.39
EIF4A3-201ENST00000269349 MROH2BQ7Z745 1585 aa29.96■■■□□ 2.39
EIF4A3-201ENST00000269349 BAZ1AQ9NRL2 1556 aaPredicted RBP29.93■■■□□ 2.38
EIF4A3-201ENST00000269349 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
EIF4A3-201ENST00000269349 WIZO95785 1651 aa29.74■■■□□ 2.35
EIF4A3-201ENST00000269349 EIF4G1Q04637 1599 aaKnown RBP29.49■■■□□ 2.31
EIF4A3-201ENST00000269349 PEG3Q9GZU2 1588 aa29.47■■■□□ 2.31
EIF4A3-201ENST00000269349 TOP2AP11388 1531 aaKnown RBP29.39■■■□□ 2.3
EIF4A3-201ENST00000269349 ATAD2BQ9ULI0 1458 aa29.35■■■□□ 2.29
EIF4A3-201ENST00000269349 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
EIF4A3-201ENST00000269349 BAZ1BQ9UIG0 1483 aaKnown RBP29.18■■■□□ 2.26
EIF4A3-201ENST00000269349 NCAPD3P42695 1498 aa29.1■■■□□ 2.25
EIF4A3-201ENST00000269349 CC2D2AQ9P2K1 1620 aa29.1■■■□□ 2.25
EIF4A3-201ENST00000269349 HMGXB3Q12766 1538 aa29.08■■■□□ 2.24
EIF4A3-201ENST00000269349 CCDC88BA6NC98 1476 aa29.07■■■□□ 2.24
EIF4A3-201ENST00000269349 CHIC1Q5VXU3 224 aa28.89■■■□□ 2.22
EIF4A3-201ENST00000269349 DNAJC5BQ9UF47 199 aa28.58■■■□□ 2.17
EIF4A3-201ENST00000269349 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
EIF4A3-201ENST00000269349 CFTRP13569 1480 aa28.43■■■□□ 2.14
EIF4A3-201ENST00000269349 TRIM41Q8WV44 630 aa28.43■■■□□ 2.14
EIF4A3-201ENST00000269349 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
EIF4A3-201ENST00000269349 CADPSQ9ULU8 1353 aa28.33■■■□□ 2.13
EIF4A3-201ENST00000269349 WRNQ14191 1432 aaPredicted RBP eCLIP28.24■■■□□ 2.11
EIF4A3-201ENST00000269349 SYNJ1O43426 1573 aa28.19■■■□□ 2.1
EIF4A3-201ENST00000269349 NESP48681 1621 aa28.18■■■□□ 2.1
EIF4A3-201ENST00000269349 LAMC3Q9Y6N6 1575 aa28.16■■■□□ 2.1
EIF4A3-201ENST00000269349 TOP2BQ02880 1626 aa28.06■■■□□ 2.08
EIF4A3-201ENST00000269349 BIVM-ERCC5R4GMW8 1640 aa28.06■■■□□ 2.08
EIF4A3-201ENST00000269349 FANCD2Q9BXW9 1451 aa28.05■■■□□ 2.08
EIF4A3-201ENST00000269349 CUX1P39880 1505 aa28.02■■■□□ 2.08
EIF4A3-201ENST00000269349 FAM9AQ8IZU1 332 aaPredicted RBP27.94■■■□□ 2.06
EIF4A3-201ENST00000269349 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
EIF4A3-201ENST00000269349 PDS5BQ9NTI5 1447 aa27.89■■■□□ 2.06
EIF4A3-201ENST00000269349 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.06
EIF4A3-201ENST00000269349 SOGA1O94964 1423 aa27.87■■■□□ 2.05
EIF4A3-201ENST00000269349 DNMBPQ6XZF7 1577 aa27.81■■■□□ 2.04
EIF4A3-201ENST00000269349 LOC105371045A0A1W2PR82 267 aa27.8■■■□□ 2.04
EIF4A3-201ENST00000269349 RUSC2Q8N2Y8 1516 aa27.8■■■□□ 2.04
EIF4A3-201ENST00000269349 TOPBP1Q92547 1522 aa27.75■■■□□ 2.03
EIF4A3-201ENST00000269349 EEA1Q15075 1411 aa27.74■■■□□ 2.03
EIF4A3-201ENST00000269349 URB2Q14146 1524 aaKnown RBP27.73■■■□□ 2.03
EIF4A3-201ENST00000269349 FGD5Q6ZNL6 1462 aa27.72■■■□□ 2.03
EIF4A3-201ENST00000269349 POLA1P09884 1462 aaPredicted RBP27.6■■■□□ 2.01
EIF4A3-201ENST00000269349 CSRNP3Q8WYN3 585 aa27.6■■■□□ 2.01
EIF4A3-201ENST00000269349 MRC2Q9UBG0 1479 aa27.59■■■□□ 2.01
EIF4A3-201ENST00000269349 EHMT2Q96KQ7 1210 aa27.57■■■□□ 2
EIF4A3-201ENST00000269349 ERCC6Q03468 1493 aa27.54■■■□□ 2
EIF4A3-201ENST00000269349 KIF27Q86VH2 1401 aa27.52■■■□□ 2
EIF4A3-201ENST00000269349 RAD54L2Q9Y4B4 1467 aa27.52■■■□□ 2
EIF4A3-201ENST00000269349 CUX2O14529 1486 aa27.51■■□□□ 1.99
EIF4A3-201ENST00000269349 WDR62O43379 1518 aa27.46■■□□□ 1.99
EIF4A3-201ENST00000269349 WDR97A6NE52 1622 aa27.46■■□□□ 1.99
EIF4A3-201ENST00000269349 KIF21BO75037 1637 aa27.46■■□□□ 1.99
EIF4A3-201ENST00000269349 ABCA10Q8WWZ4 1543 aa27.46■■□□□ 1.99
EIF4A3-201ENST00000269349 THOC2Q8NI27 1593 aaKnown RBP27.44■■□□□ 1.98
EIF4A3-201ENST00000269349 GOLGA3Q08378 1498 aa27.39■■□□□ 1.98
EIF4A3-201ENST00000269349 TARBP1Q13395 1621 aaKnown RBP27.38■■□□□ 1.97
EIF4A3-201ENST00000269349 PRXQ9BXM0 1461 aa27.33■■□□□ 1.97
EIF4A3-201ENST00000269349 RAPGEF2Q9Y4G8 1499 aa27.31■■□□□ 1.96
EIF4A3-201ENST00000269349 IGF1RP08069 1367 aa27.29■■□□□ 1.96
EIF4A3-201ENST00000269349 ABCA5Q8WWZ7 1642 aa27.29■■□□□ 1.96
EIF4A3-201ENST00000269349 ERICH3Q5RHP9 1530 aa27.28■■□□□ 1.96
EIF4A3-201ENST00000269349 TNIKQ9UKE5 1360 aa27.26■■□□□ 1.95
EIF4A3-201ENST00000269349 UBTFP17480 764 aaKnown RBP27.24■■□□□ 1.95
EIF4A3-201ENST00000269349 TDRD9Q8NDG6 1382 aaKnown RBP27.24■■□□□ 1.95
EIF4A3-201ENST00000269349 IFT140Q96RY7 1462 aa27.21■■□□□ 1.95
EIF4A3-201ENST00000269349 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
EIF4A3-201ENST00000269349 CARMIL1Q5VZK9 1371 aa27.15■■□□□ 1.94
EIF4A3-201ENST00000269349 CUL7Q14999 1698 aa27.15■■□□□ 1.94
EIF4A3-201ENST00000269349 PBRM1Q86U86 1689 aa27.14■■□□□ 1.93
EIF4A3-201ENST00000269349 CEP162Q5TB80 1403 aa27.13■■□□□ 1.93
EIF4A3-201ENST00000269349 ZNF608Q9ULD9 1512 aaPredicted RBP27.1■■□□□ 1.93
EIF4A3-201ENST00000269349 AQRO60306 1485 aaKnown RBP eCLIP27.09■■□□□ 1.938e-7■■■■□ 23
EIF4A3-201ENST00000269349 EIF4G3O43432 1585 aaKnown RBP27.04■■□□□ 1.92
EIF4A3-201ENST00000269349 GRIN2BQ13224 1484 aa26.99■■□□□ 1.91
EIF4A3-201ENST00000269349 ADAMTS12P58397 1594 aa26.94■■□□□ 1.9
EIF4A3-201ENST00000269349 CLIP1P30622 1438 aa26.94■■□□□ 1.9
EIF4A3-201ENST00000269349 CTTNBP2Q8WZ74 1663 aa26.89■■□□□ 1.89
EIF4A3-201ENST00000269349 FHAD1B1AJZ9 1412 aa26.88■■□□□ 1.89
EIF4A3-201ENST00000269349 RANGAP1P46060 587 aaPredicted RBP26.87■■□□□ 1.89
EIF4A3-201ENST00000269349 SNAPC4Q5SXM2 1469 aa26.85■■□□□ 1.89
EIF4A3-201ENST00000269349 MAGI1Q96QZ7 1491 aaPredicted RBP26.78■■□□□ 1.88
EIF4A3-201ENST00000269349 ARHGAP35Q9NRY4 1499 aa26.73■■□□□ 1.87
EIF4A3-201ENST00000269349 ARAP1Q96P48 1450 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms