RNA–Protein interactions for RNA: ENST00000267869.8

GTF2A2-201, Transcript of general transcription factor IIA subunit 2, humanhuman

TSL 3

Gene GTF2A2, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-201ENST00000267869 NISCHQ9Y2I1 1504 aa35.54■■■■□ 3.28
GTF2A2-201ENST00000267869 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
GTF2A2-201ENST00000267869 ABCC9O60706 1549 aa30.8■■■□□ 2.52
GTF2A2-201ENST00000267869 RB1CC1Q8TDY2 1594 aa29.74■■■□□ 2.35
GTF2A2-201ENST00000267869 NACADO15069 1562 aa29.69■■■□□ 2.34
GTF2A2-201ENST00000267869 DCAF8L2P0C7V8 631 aa29.68■■■□□ 2.34
GTF2A2-201ENST00000267869 ZCCHC6Q5VYS8 1495 aaKnown RBP29.64■■■□□ 2.34
GTF2A2-201ENST00000267869 MYO15BQ96JP2 1530 aa29.5■■■□□ 2.31
GTF2A2-201ENST00000267869 DCAF1Q9Y4B6 1507 aa29.42■■■□□ 2.3
GTF2A2-201ENST00000267869 UNC13AQ9UPW8 1703 aa29.07■■■□□ 2.24
GTF2A2-201ENST00000267869 SCRIBQ14160 1630 aa28.88■■■□□ 2.21
GTF2A2-201ENST00000267869 PABPN1Q86U42 306 aaKnown RBP eCLIP28.73■■■□□ 2.19
GTF2A2-201ENST00000267869 BICRAQ9NZM4 1560 aa28.73■■■□□ 2.19
GTF2A2-201ENST00000267869 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
GTF2A2-201ENST00000267869 EIF4G1Q04637 1599 aaKnown RBP28.02■■■□□ 2.08
GTF2A2-201ENST00000267869 DNAJC5BQ9UF47 199 aa28■■■□□ 2.07
GTF2A2-201ENST00000267869 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.05
GTF2A2-201ENST00000267869 CECR2Q9BXF3 1484 aa27.67■■■□□ 2.02
GTF2A2-201ENST00000267869 SMARCA4P51532 1647 aa27.61■■■□□ 2.01
GTF2A2-201ENST00000267869 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
GTF2A2-201ENST00000267869 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
GTF2A2-201ENST00000267869 MROH2BQ7Z745 1585 aa27.38■■□□□ 1.97
GTF2A2-201ENST00000267869 ATAD2BQ9ULI0 1458 aa27.37■■□□□ 1.97
GTF2A2-201ENST00000267869 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
GTF2A2-201ENST00000267869 PEG3Q9GZU2 1588 aa27.31■■□□□ 1.96
GTF2A2-201ENST00000267869 HMGXB3Q12766 1538 aa27.28■■□□□ 1.96
GTF2A2-201ENST00000267869 BAZ1BQ9UIG0 1483 aaKnown RBP27.23■■□□□ 1.95
GTF2A2-201ENST00000267869 WIZO95785 1651 aa27.14■■□□□ 1.94
GTF2A2-201ENST00000267869 RSF1Q96T23 1441 aaPredicted RBP27.08■■□□□ 1.93
GTF2A2-201ENST00000267869 TOP2AP11388 1531 aaKnown RBP26.88■■□□□ 1.89
GTF2A2-201ENST00000267869 LAMC3Q9Y6N6 1575 aa26.68■■□□□ 1.86
GTF2A2-201ENST00000267869 NESP48681 1621 aa26.65■■□□□ 1.86
GTF2A2-201ENST00000267869 ERCC6Q03468 1493 aa26.62■■□□□ 1.85
GTF2A2-201ENST00000267869 CADPSQ9ULU8 1353 aa26.54■■□□□ 1.84
GTF2A2-201ENST00000267869 SUPT5HO00267 1087 aaKnown RBP26.52■■□□□ 1.84
GTF2A2-201ENST00000267869 CCDC88BA6NC98 1476 aa26.49■■□□□ 1.83
GTF2A2-201ENST00000267869 PDS5BQ9NTI5 1447 aa26.47■■□□□ 1.83
GTF2A2-201ENST00000267869 AEBP2Q6ZN18 517 aaPredicted RBP26.46■■□□□ 1.83
GTF2A2-201ENST00000267869 KIF21AQ7Z4S6 1674 aa26.44■■□□□ 1.82
GTF2A2-201ENST00000267869 CFTRP13569 1480 aa26.41■■□□□ 1.82
GTF2A2-201ENST00000267869 PRDM2Q13029 1718 aa26.39■■□□□ 1.82
GTF2A2-201ENST00000267869 FANCD2Q9BXW9 1451 aa26.29■■□□□ 1.8
GTF2A2-201ENST00000267869 CEP164Q9UPV0 1460 aa26.29■■□□□ 1.8
GTF2A2-201ENST00000267869 THOC2Q8NI27 1593 aaKnown RBP26.29■■□□□ 1.8
GTF2A2-201ENST00000267869 CUX2O14529 1486 aa26.25■■□□□ 1.79
GTF2A2-201ENST00000267869 MRC2Q9UBG0 1479 aa26.2■■□□□ 1.78
GTF2A2-201ENST00000267869 WDR62O43379 1518 aa26.1■■□□□ 1.77
GTF2A2-201ENST00000267869 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
GTF2A2-201ENST00000267869 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
GTF2A2-201ENST00000267869 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
GTF2A2-201ENST00000267869 TOPBP1Q92547 1522 aa25.87■■□□□ 1.73
GTF2A2-201ENST00000267869 CUX1P39880 1505 aa25.7■■□□□ 1.7
GTF2A2-201ENST00000267869 IFT140Q96RY7 1462 aa25.7■■□□□ 1.7
GTF2A2-201ENST00000267869 POLA1P09884 1462 aaPredicted RBP25.65■■□□□ 1.7
GTF2A2-201ENST00000267869 FGD5Q6ZNL6 1462 aa25.62■■□□□ 1.69
GTF2A2-201ENST00000267869 WRNQ14191 1432 aaPredicted RBP eCLIP25.6■■□□□ 1.69
GTF2A2-201ENST00000267869 TARBP1Q13395 1621 aaKnown RBP25.58■■□□□ 1.69
GTF2A2-201ENST00000267869 BIVM-ERCC5R4GMW8 1640 aa25.57■■□□□ 1.68
GTF2A2-201ENST00000267869 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
GTF2A2-201ENST00000267869 SOGA1O94964 1423 aa25.54■■□□□ 1.68
GTF2A2-201ENST00000267869 SYNJ1O43426 1573 aa25.53■■□□□ 1.68
GTF2A2-201ENST00000267869 EIF4G3O43432 1585 aaKnown RBP25.52■■□□□ 1.68
GTF2A2-201ENST00000267869 ZNF608Q9ULD9 1512 aaPredicted RBP25.52■■□□□ 1.68
GTF2A2-201ENST00000267869 RAD54L2Q9Y4B4 1467 aa25.51■■□□□ 1.67
GTF2A2-201ENST00000267869 WDR97A6NE52 1622 aa25.46■■□□□ 1.67
GTF2A2-201ENST00000267869 AQRO60306 1485 aaKnown RBP eCLIP25.39■■□□□ 1.652e-8■□□□□ 8.7
GTF2A2-201ENST00000267869 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
GTF2A2-201ENST00000267869 TDRD9Q8NDG6 1382 aaKnown RBP25.36■■□□□ 1.65
GTF2A2-201ENST00000267869 PBRM1Q86U86 1689 aa25.31■■□□□ 1.64
GTF2A2-201ENST00000267869 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
GTF2A2-201ENST00000267869 GAPVD1Q14C86 1478 aa25.27■■□□□ 1.64
GTF2A2-201ENST00000267869 GRIN2BQ13224 1484 aa25.26■■□□□ 1.63
GTF2A2-201ENST00000267869 SNAPC4Q5SXM2 1469 aa25.21■■□□□ 1.63
GTF2A2-201ENST00000267869 CHD1O14646 1710 aa25.21■■□□□ 1.63
GTF2A2-201ENST00000267869 DNAJC5Q9H3Z4 198 aa25.2■■□□□ 1.62
GTF2A2-201ENST00000267869 MAGI1Q96QZ7 1491 aaPredicted RBP25.2■■□□□ 1.62
GTF2A2-201ENST00000267869 CHIC1Q5VXU3 224 aa25.17■■□□□ 1.62
GTF2A2-201ENST00000267869 FBLN2P98095 1184 aa25.13■■□□□ 1.61
GTF2A2-201ENST00000267869 OSCARQ8IYS5 282 aa25.13■■□□□ 1.61
GTF2A2-201ENST00000267869 ERICH3Q5RHP9 1530 aa25.1■■□□□ 1.61
GTF2A2-201ENST00000267869 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
GTF2A2-201ENST00000267869 KIF27Q86VH2 1401 aa25.07■■□□□ 1.6
GTF2A2-201ENST00000267869 CHMP7Q8WUX9 453 aaPredicted RBP25.06■■□□□ 1.6
GTF2A2-201ENST00000267869 TRIM41Q8WV44 630 aa25.06■■□□□ 1.6
GTF2A2-201ENST00000267869 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
GTF2A2-201ENST00000267869 FHAD1B1AJZ9 1412 aa24.98■■□□□ 1.59
GTF2A2-201ENST00000267869 CUL7Q14999 1698 aa24.96■■□□□ 1.59
GTF2A2-201ENST00000267869 GRIN2AQ12879 1464 aa24.94■■□□□ 1.58
GTF2A2-201ENST00000267869 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
GTF2A2-201ENST00000267869 IGF1RP08069 1367 aa24.85■■□□□ 1.57
GTF2A2-201ENST00000267869 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
GTF2A2-201ENST00000267869 RUSC2Q8N2Y8 1516 aa24.78■■□□□ 1.56
GTF2A2-201ENST00000267869 RIMBP3CA6NJZ7 1639 aa24.78■■□□□ 1.56
GTF2A2-201ENST00000267869 RIMBP3BA6NNM3 1639 aa24.78■■□□□ 1.56
GTF2A2-201ENST00000267869 RIMBP3Q9UFD9 1639 aa24.78■■□□□ 1.56
GTF2A2-201ENST00000267869 NUP160Q12769 1436 aa24.78■■□□□ 1.56
GTF2A2-201ENST00000267869 CARMIL1Q5VZK9 1371 aa24.77■■□□□ 1.56
GTF2A2-201ENST00000267869 ARHGEF11O15085 1522 aa24.76■■□□□ 1.55
GTF2A2-201ENST00000267869 EEA1Q15075 1411 aa24.68■■□□□ 1.54
GTF2A2-201ENST00000267869 RAPGEF2Q9Y4G8 1499 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms