RNA–Protein interactions for RNA: ENST00000263036.9

OPTN-201, Transcript of optineurin, humanhuman

APPRIS P2 TSL 2 BASIC

Gene OPTN, Length 2,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-201ENST00000263036 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
OPTN-201ENST00000263036 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
OPTN-201ENST00000263036 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
OPTN-201ENST00000263036 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
OPTN-201ENST00000263036 SUPT5HO00267 1087 aaKnown RBP18.14■□□□□ 0.5
OPTN-201ENST00000263036 HRCP23327 699 aa18.11■□□□□ 0.49
OPTN-201ENST00000263036 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.47
OPTN-201ENST00000263036 MYO15BQ96JP2 1530 aa17.92■□□□□ 0.46
OPTN-201ENST00000263036 PCGF6Q9BYE7 350 aa17.76■□□□□ 0.43
OPTN-201ENST00000263036 CCDC180Q9P1Z9 1646 aa17.71■□□□□ 0.43
OPTN-201ENST00000263036 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
OPTN-201ENST00000263036 PHF23Q9BUL5 403 aaPredicted RBP17.62■□□□□ 0.41
OPTN-201ENST00000263036 PPARGC1BQ86YN6 1023 aaKnown RBP17.6■□□□□ 0.41
OPTN-201ENST00000263036 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
OPTN-201ENST00000263036 LOC105371045A0A1W2PR82 267 aa17.35■□□□□ 0.37
OPTN-201ENST00000263036 DCAF8L2P0C7V8 631 aa17.33■□□□□ 0.36
OPTN-201ENST00000263036 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.34
OPTN-201ENST00000263036 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
OPTN-201ENST00000263036 ABCC9O60706 1549 aa17.02■□□□□ 0.31
OPTN-201ENST00000263036 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
OPTN-201ENST00000263036 RSF1Q96T23 1441 aaPredicted RBP16.89■□□□□ 0.29
OPTN-201ENST00000263036 TRIM41Q8WV44 630 aa16.89■□□□□ 0.29
OPTN-201ENST00000263036 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.27
OPTN-201ENST00000263036 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
OPTN-201ENST00000263036 EHMT2Q96KQ7 1210 aa16.67■□□□□ 0.26
OPTN-201ENST00000263036 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
OPTN-201ENST00000263036 ACIN1Q9UKV3 1341 aaKnown RBP16.65■□□□□ 0.26
OPTN-201ENST00000263036 NEUROD1Q13562 356 aa16.56■□□□□ 0.24
OPTN-201ENST00000263036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.54■□□□□ 0.24
OPTN-201ENST00000263036 CCER1Q8TC90 406 aaPredicted RBP16.54■□□□□ 0.24
OPTN-201ENST00000263036 MYT1Q01538 1121 aa16.5■□□□□ 0.23
OPTN-201ENST00000263036 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
OPTN-201ENST00000263036 DIEXFQ68CQ4 756 aaKnown RBP16.47■□□□□ 0.23
OPTN-201ENST00000263036 GTF3C3Q9Y5Q9 886 aa16.44■□□□□ 0.22
OPTN-201ENST00000263036 CECR2Q9BXF3 1484 aa16.43■□□□□ 0.22
OPTN-201ENST00000263036 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
OPTN-201ENST00000263036 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.21
OPTN-201ENST00000263036 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
OPTN-201ENST00000263036 WIZO95785 1651 aa16.33■□□□□ 0.2
OPTN-201ENST00000263036 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
OPTN-201ENST00000263036 NACADO15069 1562 aa16.3■□□□□ 0.2
OPTN-201ENST00000263036 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
OPTN-201ENST00000263036 CEP162Q5TB80 1403 aa16.25■□□□□ 0.19
OPTN-201ENST00000263036 ZNF316A6NFI3 1004 aaPredicted RBP16.24■□□□□ 0.19
OPTN-201ENST00000263036 TNIKQ9UKE5 1360 aa16.21■□□□□ 0.19
OPTN-201ENST00000263036 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
OPTN-201ENST00000263036 TTBK1Q5TCY1 1321 aaPredicted RBP16.15■□□□□ 0.18
OPTN-201ENST00000263036 EEA1Q15075 1411 aa16.13■□□□□ 0.17
OPTN-201ENST00000263036 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
OPTN-201ENST00000263036 TOP2AP11388 1531 aaKnown RBP16.12■□□□□ 0.17
OPTN-201ENST00000263036 SOGA1O94964 1423 aa16.1■□□□□ 0.17
OPTN-201ENST00000263036 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
OPTN-201ENST00000263036 YTHDC1Q96MU7 727 aaKnown RBP16.06■□□□□ 0.16
OPTN-201ENST00000263036 KCNA4P22459 653 aa16.05■□□□□ 0.16
OPTN-201ENST00000263036 MIER1Q8N108 512 aa16.05■□□□□ 0.16
OPTN-201ENST00000263036 SMARCA2P51531 1590 aa16.03■□□□□ 0.16
OPTN-201ENST00000263036 GOLGA3Q08378 1498 aa16.02■□□□□ 0.16
OPTN-201ENST00000263036 UBTFP17480 764 aaKnown RBP16.02■□□□□ 0.15
OPTN-201ENST00000263036 RUSC2Q8N2Y8 1516 aa15.98■□□□□ 0.15
OPTN-201ENST00000263036 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
OPTN-201ENST00000263036 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
OPTN-201ENST00000263036 CLSPNQ9HAW4 1339 aa15.89■□□□□ 0.13
OPTN-201ENST00000263036 CEP164Q9UPV0 1460 aa15.89■□□□□ 0.13
OPTN-201ENST00000263036 KIF21BO75037 1637 aa15.86■□□□□ 0.13
OPTN-201ENST00000263036 CLIP1P30622 1438 aa15.86■□□□□ 0.13
OPTN-201ENST00000263036 VPS8Q8N3P4 1428 aa15.86■□□□□ 0.13
OPTN-201ENST00000263036 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
OPTN-201ENST00000263036 SLC24A1O60721 1099 aa15.81■□□□□ 0.12
OPTN-201ENST00000263036 BAZ1BQ9UIG0 1483 aaKnown RBP15.79■□□□□ 0.12
OPTN-201ENST00000263036 APLP2Q06481 763 aa15.77■□□□□ 0.12
OPTN-201ENST00000263036 ADRA2BP18089 450 aa15.76■□□□□ 0.11
OPTN-201ENST00000263036 BICRAQ9NZM4 1560 aa15.76■□□□□ 0.11
OPTN-201ENST00000263036 SUPT16HQ9Y5B9 1047 aaKnown RBP15.75■□□□□ 0.11
OPTN-201ENST00000263036 SYNJ1O43426 1573 aa15.73■□□□□ 0.11
OPTN-201ENST00000263036 DHX57Q6P158 1386 aaKnown RBP15.72■□□□□ 0.11
OPTN-201ENST00000263036 RAPGEF2Q9Y4G8 1499 aa15.69■□□□□ 0.1
OPTN-201ENST00000263036 PEG3Q9GZU2 1588 aa15.67■□□□□ 0.1
OPTN-201ENST00000263036 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.097e-9■□□□□ 10
OPTN-201ENST00000263036 TSHZ2Q9NRE2 1034 aa15.62■□□□□ 0.09
OPTN-201ENST00000263036 CUX2O14529 1486 aa15.57■□□□□ 0.08
OPTN-201ENST00000263036 RRBP1Q9P2E9 1410 aaKnown RBP15.57■□□□□ 0.08
OPTN-201ENST00000263036 ANP32EQ9BTT0 268 aa15.56■□□□□ 0.08
OPTN-201ENST00000263036 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
OPTN-201ENST00000263036 ERICH3Q5RHP9 1530 aa15.54■□□□□ 0.08
OPTN-201ENST00000263036 RANGAP1P46060 587 aaPredicted RBP15.54■□□□□ 0.08
OPTN-201ENST00000263036 KANK4Q5T7N3 995 aaPredicted RBP15.51■□□□□ 0.07
OPTN-201ENST00000263036 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
OPTN-201ENST00000263036 TOP2BQ02880 1626 aa15.51■□□□□ 0.07
OPTN-201ENST00000263036 SENP3Q9H4L4 574 aaPredicted RBP15.5■□□□□ 0.07
OPTN-201ENST00000263036 ATAD2BQ9ULI0 1458 aa15.48■□□□□ 0.07
OPTN-201ENST00000263036 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
OPTN-201ENST00000263036 CCNB3Q8WWL7 1395 aa15.46■□□□□ 0.07
OPTN-201ENST00000263036 BIVM-ERCC5R4GMW8 1640 aa15.43■□□□□ 0.06
OPTN-201ENST00000263036 KCNH8Q96L42 1107 aa15.41■□□□□ 0.06
OPTN-201ENST00000263036 MAPKBP1O60336 1514 aa15.38■□□□□ 0.05
OPTN-201ENST00000263036 RAB3GAP2Q9H2M9 1393 aa15.37■□□□□ 0.05
OPTN-201ENST00000263036 FKBP8Q14318 412 aa15.35■□□□□ 0.05
OPTN-201ENST00000263036 ARHGAP35Q9NRY4 1499 aa15.34■□□□□ 0.05
OPTN-201ENST00000263036 BCANQ96GW7 911 aa15.34■□□□□ 0.05
OPTN-201ENST00000263036 KIF27Q86VH2 1401 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms