RNA–Protein interactions for RNA: ENST00000261593.7

RNF138-202, Transcript of ring finger protein 138, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF138, Length 3,570 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138-202ENST00000261593 NISCHQ9Y2I1 1504 aa20.96■□□□□ 0.95
RNF138-202ENST00000261593 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
RNF138-202ENST00000261593 SHROOM4Q9ULL8 1493 aa18.83■□□□□ 0.6
RNF138-202ENST00000261593 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
RNF138-202ENST00000261593 PCGF6Q9BYE7 350 aa17.93■□□□□ 0.46
RNF138-202ENST00000261593 ABCC9O60706 1549 aa17.85■□□□□ 0.45
RNF138-202ENST00000261593 PPARGC1BQ86YN6 1023 aaKnown RBP17.76■□□□□ 0.43
RNF138-202ENST00000261593 HRCP23327 699 aa17.67■□□□□ 0.42
RNF138-202ENST00000261593 EHMT2Q96KQ7 1210 aa17.5■□□□□ 0.39
RNF138-202ENST00000261593 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
RNF138-202ENST00000261593 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
RNF138-202ENST00000261593 PABPN1Q86U42 306 aaKnown RBP eCLIP17.37■□□□□ 0.37
RNF138-202ENST00000261593 LOC105371045A0A1W2PR82 267 aa17.2■□□□□ 0.34
RNF138-202ENST00000261593 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
RNF138-202ENST00000261593 FAM9AQ8IZU1 332 aaPredicted RBP17.18■□□□□ 0.34
RNF138-202ENST00000261593 CHIC1Q5VXU3 224 aa17.15■□□□□ 0.34
RNF138-202ENST00000261593 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
RNF138-202ENST00000261593 TTBK1Q5TCY1 1321 aaPredicted RBP16.96■□□□□ 0.31
RNF138-202ENST00000261593 TRIM26Q12899 539 aaPredicted RBP16.9■□□□□ 0.3
RNF138-202ENST00000261593 MYO15BQ96JP2 1530 aa16.84■□□□□ 0.29
RNF138-202ENST00000261593 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
RNF138-202ENST00000261593 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
RNF138-202ENST00000261593 CECR2Q9BXF3 1484 aa16.78■□□□□ 0.28
RNF138-202ENST00000261593 YTHDC1Q96MU7 727 aaKnown RBP16.77■□□□□ 0.28
RNF138-202ENST00000261593 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.27
RNF138-202ENST00000261593 CCER1Q8TC90 406 aaPredicted RBP16.72■□□□□ 0.27
RNF138-202ENST00000261593 RANGAP1P46060 587 aaPredicted RBP16.67■□□□□ 0.26
RNF138-202ENST00000261593 CENPBP07199 599 aaPredicted RBP16.65■□□□□ 0.26
RNF138-202ENST00000261593 DCAF1Q9Y4B6 1507 aa16.64■□□□□ 0.26
RNF138-202ENST00000261593 RSF1Q96T23 1441 aaPredicted RBP16.64■□□□□ 0.25
RNF138-202ENST00000261593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
RNF138-202ENST00000261593 GTF3C3Q9Y5Q9 886 aa16.61■□□□□ 0.25
RNF138-202ENST00000261593 NACADO15069 1562 aa16.58■□□□□ 0.24
RNF138-202ENST00000261593 RB1CC1Q8TDY2 1594 aa16.58■□□□□ 0.24
RNF138-202ENST00000261593 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
RNF138-202ENST00000261593 NEUROD1Q13562 356 aa16.48■□□□□ 0.23
RNF138-202ENST00000261593 ACIN1Q9UKV3 1341 aaKnown RBP16.45■□□□□ 0.22
RNF138-202ENST00000261593 DIEXFQ68CQ4 756 aaKnown RBP16.43■□□□□ 0.22
RNF138-202ENST00000261593 MYT1Q01538 1121 aa16.41■□□□□ 0.22
RNF138-202ENST00000261593 WIZO95785 1651 aa16.33■□□□□ 0.2
RNF138-202ENST00000261593 UBTFP17480 764 aaKnown RBP16.3■□□□□ 0.2
RNF138-202ENST00000261593 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
RNF138-202ENST00000261593 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
RNF138-202ENST00000261593 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.17
RNF138-202ENST00000261593 CCDC88BA6NC98 1476 aa16.07■□□□□ 0.16
RNF138-202ENST00000261593 ABCC8Q09428 1581 aa16.07■□□□□ 0.16
RNF138-202ENST00000261593 BICRAQ9NZM4 1560 aa16.03■□□□□ 0.16
RNF138-202ENST00000261593 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.15
RNF138-202ENST00000261593 ATP1B4Q9UN42 357 aaPredicted RBP16■□□□□ 0.15
RNF138-202ENST00000261593 BAZ1BQ9UIG0 1483 aaKnown RBP15.99■□□□□ 0.15
RNF138-202ENST00000261593 SMARCA4P51532 1647 aa15.99■□□□□ 0.15
RNF138-202ENST00000261593 BCANQ96GW7 911 aa15.97■□□□□ 0.15
RNF138-202ENST00000261593 ZNF316A6NFI3 1004 aaPredicted RBP15.94■□□□□ 0.14
RNF138-202ENST00000261593 APLP2Q06481 763 aa15.94■□□□□ 0.14
RNF138-202ENST00000261593 SOGA1O94964 1423 aa15.92■□□□□ 0.14
RNF138-202ENST00000261593 MIER1Q8N108 512 aa15.91■□□□□ 0.14
RNF138-202ENST00000261593 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
RNF138-202ENST00000261593 ATAD2BQ9ULI0 1458 aa15.9■□□□□ 0.14
RNF138-202ENST00000261593 RUSC2Q8N2Y8 1516 aa15.85■□□□□ 0.13
RNF138-202ENST00000261593 P3H3Q8IVL6 736 aa15.85■□□□□ 0.13
RNF138-202ENST00000261593 TOP2AP11388 1531 aaKnown RBP15.81■□□□□ 0.12
RNF138-202ENST00000261593 WRNQ14191 1432 aaPredicted RBP eCLIP15.79■□□□□ 0.12
RNF138-202ENST00000261593 SMARCA2P51531 1590 aa15.78■□□□□ 0.12
RNF138-202ENST00000261593 ITGAEP38570 1179 aa15.76■□□□□ 0.11
RNF138-202ENST00000261593 ERICH6Q7L0X2 663 aa15.76■□□□□ 0.11
RNF138-202ENST00000261593 ARID3CA6NKF2 412 aa15.74■□□□□ 0.11
RNF138-202ENST00000261593 EIF4G1Q04637 1599 aaKnown RBP15.73■□□□□ 0.11
RNF138-202ENST00000261593 NEFLP07196 543 aa15.67■□□□□ 0.1
RNF138-202ENST00000261593 FBLN2P98095 1184 aa15.66■□□□□ 0.1
RNF138-202ENST00000261593 NESP48681 1621 aa15.61■□□□□ 0.09
RNF138-202ENST00000261593 BCL11AQ9H165 835 aa15.55■□□□□ 0.08
RNF138-202ENST00000261593 CC2D2AQ9P2K1 1620 aa15.54■□□□□ 0.08
RNF138-202ENST00000261593 FKBP8Q14318 412 aa15.54■□□□□ 0.08
RNF138-202ENST00000261593 SUPT16HQ9Y5B9 1047 aaKnown RBP15.53■□□□□ 0.08
RNF138-202ENST00000261593 CEP162Q5TB80 1403 aa15.52■□□□□ 0.08
RNF138-202ENST00000261593 ANP32EQ9BTT0 268 aa15.51■□□□□ 0.07
RNF138-202ENST00000261593 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
RNF138-202ENST00000261593 CADPSQ9ULU8 1353 aa15.49■□□□□ 0.07
RNF138-202ENST00000261593 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
RNF138-202ENST00000261593 SYNJ1O43426 1573 aa15.48■□□□□ 0.07
RNF138-202ENST00000261593 CNGB1Q14028 1251 aaPredicted RBP15.44■□□□□ 0.06
RNF138-202ENST00000261593 CUX2O14529 1486 aa15.44■□□□□ 0.06
RNF138-202ENST00000261593 RAPGEF2Q9Y4G8 1499 aa15.44■□□□□ 0.06
RNF138-202ENST00000261593 CLIP1P30622 1438 aa15.41■□□□□ 0.06
RNF138-202ENST00000261593 TRIM52Q96A61 297 aa15.41■□□□□ 0.06
RNF138-202ENST00000261593 TSHZ2Q9NRE2 1034 aa15.4■□□□□ 0.06
RNF138-202ENST00000261593 RAD54L2Q9Y4B4 1467 aa15.4■□□□□ 0.06
RNF138-202ENST00000261593 HIRIP3Q9BW71 556 aaPredicted RBP15.38■□□□□ 0.05
RNF138-202ENST00000261593 FAM50AQ14320 339 aaKnown RBP15.36■□□□□ 0.05
RNF138-202ENST00000261593 GOLGA3Q08378 1498 aa15.36■□□□□ 0.05
RNF138-202ENST00000261593 IRX6P78412 446 aaPredicted RBP15.35■□□□□ 0.05
RNF138-202ENST00000261593 FANCD2Q9BXW9 1451 aa15.35■□□□□ 0.05
RNF138-202ENST00000261593 DDX10Q13206 875 aaKnown RBP15.35■□□□□ 0.05
RNF138-202ENST00000261593 KIF27Q86VH2 1401 aa15.34■□□□□ 0.05
RNF138-202ENST00000261593 TNIKQ9UKE5 1360 aa15.34■□□□□ 0.05
RNF138-202ENST00000261593 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
RNF138-202ENST00000261593 KCNH8Q96L42 1107 aa15.31■□□□□ 0.04
RNF138-202ENST00000261593 CFTRP13569 1480 aa15.3■□□□□ 0.04
RNF138-202ENST00000261593 CUX1P39880 1505 aa15.3■□□□□ 0.04
RNF138-202ENST00000261593 PEG3Q9GZU2 1588 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms