RNA–Protein interactions for RNA: ENST00000261413.9

MRPS27-201, Transcript of mitochondrial ribosomal protein S27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS27, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS27-201ENST00000261413 NISCHQ9Y2I1 1504 aa15.76■□□□□ 0.11
MRPS27-201ENST00000261413 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
MRPS27-201ENST00000261413 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
MRPS27-201ENST00000261413 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
MRPS27-201ENST00000261413 ABCC9O60706 1549 aa13.35□□□□□ -0.27
MRPS27-201ENST00000261413 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
MRPS27-201ENST00000261413 NACADO15069 1562 aa13.29□□□□□ -0.28
MRPS27-201ENST00000261413 RB1CC1Q8TDY2 1594 aa13.22□□□□□ -0.29
MRPS27-201ENST00000261413 ZCCHC6Q5VYS8 1495 aaKnown RBP13.18□□□□□ -0.3
MRPS27-201ENST00000261413 SHROOM4Q9ULL8 1493 aa12.98□□□□□ -0.33
MRPS27-201ENST00000261413 CHIC1Q5VXU3 224 aa12.96□□□□□ -0.33
MRPS27-201ENST00000261413 UNC13AQ9UPW8 1703 aa12.83□□□□□ -0.36
MRPS27-201ENST00000261413 BICRAQ9NZM4 1560 aa12.73□□□□□ -0.37
MRPS27-201ENST00000261413 SCRIBQ14160 1630 aa12.58□□□□□ -0.4
MRPS27-201ENST00000261413 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
MRPS27-201ENST00000261413 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
MRPS27-201ENST00000261413 PABPN1Q86U42 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
MRPS27-201ENST00000261413 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
MRPS27-201ENST00000261413 PEG3Q9GZU2 1588 aa12.28□□□□□ -0.44
MRPS27-201ENST00000261413 BAZ1AQ9NRL2 1556 aaPredicted RBP12.27□□□□□ -0.45
MRPS27-201ENST00000261413 CC2D2AQ9P2K1 1620 aa12.26□□□□□ -0.45
MRPS27-201ENST00000261413 SMARCA4P51532 1647 aa12.22□□□□□ -0.45
MRPS27-201ENST00000261413 SMARCA2P51531 1590 aa12.21□□□□□ -0.45
MRPS27-201ENST00000261413 HMGXB3Q12766 1538 aa12.2□□□□□ -0.46
MRPS27-201ENST00000261413 NCAPD3P42695 1498 aa12.19□□□□□ -0.46
MRPS27-201ENST00000261413 MYT1Q01538 1121 aa12.15□□□□□ -0.46
MRPS27-201ENST00000261413 CECR2Q9BXF3 1484 aa12.13□□□□□ -0.47
MRPS27-201ENST00000261413 ATAD2BQ9ULI0 1458 aa12.1□□□□□ -0.47
MRPS27-201ENST00000261413 DNAJC5BQ9UF47 199 aa12.09□□□□□ -0.47
MRPS27-201ENST00000261413 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
MRPS27-201ENST00000261413 BAZ1BQ9UIG0 1483 aaKnown RBP11.97□□□□□ -0.49
MRPS27-201ENST00000261413 TOP2AP11388 1531 aaKnown RBP11.94□□□□□ -0.5
MRPS27-201ENST00000261413 RSF1Q96T23 1441 aaPredicted RBP11.93□□□□□ -0.5
MRPS27-201ENST00000261413 LAMC3Q9Y6N6 1575 aa11.89□□□□□ -0.51
MRPS27-201ENST00000261413 WIZO95785 1651 aa11.87□□□□□ -0.51
MRPS27-201ENST00000261413 PRDM2Q13029 1718 aa11.82□□□□□ -0.52
MRPS27-201ENST00000261413 CFTRP13569 1480 aa11.73□□□□□ -0.53
MRPS27-201ENST00000261413 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
MRPS27-201ENST00000261413 CUX2O14529 1486 aa11.72□□□□□ -0.53
MRPS27-201ENST00000261413 PDS5BQ9NTI5 1447 aa11.72□□□□□ -0.53
MRPS27-201ENST00000261413 TTBK1Q5TCY1 1321 aaPredicted RBP11.71□□□□□ -0.53
MRPS27-201ENST00000261413 THOC2Q8NI27 1593 aaKnown RBP11.65□□□□□ -0.54
MRPS27-201ENST00000261413 CCDC88BA6NC98 1476 aa11.65□□□□□ -0.54
MRPS27-201ENST00000261413 ABCC8Q09428 1581 aa11.62□□□□□ -0.55
MRPS27-201ENST00000261413 WDR62O43379 1518 aa11.62□□□□□ -0.55
MRPS27-201ENST00000261413 KIF21AQ7Z4S6 1674 aa11.6□□□□□ -0.55
MRPS27-201ENST00000261413 MRC2Q9UBG0 1479 aa11.6□□□□□ -0.55
MRPS27-201ENST00000261413 ERCC6Q03468 1493 aa11.58□□□□□ -0.56
MRPS27-201ENST00000261413 CEP164Q9UPV0 1460 aa11.58□□□□□ -0.56
MRPS27-201ENST00000261413 NESP48681 1621 aa11.56□□□□□ -0.56
MRPS27-201ENST00000261413 FANCD2Q9BXW9 1451 aa11.56□□□□□ -0.56
MRPS27-201ENST00000261413 WDR97A6NE52 1622 aa11.55□□□□□ -0.56
MRPS27-201ENST00000261413 DNMBPQ6XZF7 1577 aa11.49□□□□□ -0.57
MRPS27-201ENST00000261413 PHF23Q9BUL5 403 aaPredicted RBP11.43□□□□□ -0.58
MRPS27-201ENST00000261413 URB2Q14146 1524 aaKnown RBP11.43□□□□□ -0.58
MRPS27-201ENST00000261413 SENP3Q9H4L4 574 aaPredicted RBP11.43□□□□□ -0.58
MRPS27-201ENST00000261413 IFT140Q96RY7 1462 aa11.41□□□□□ -0.58
MRPS27-201ENST00000261413 TOPBP1Q92547 1522 aa11.41□□□□□ -0.58
MRPS27-201ENST00000261413 BIVM-ERCC5R4GMW8 1640 aa11.4□□□□□ -0.58
MRPS27-201ENST00000261413 TARBP1Q13395 1621 aaKnown RBP11.34□□□□□ -0.59
MRPS27-201ENST00000261413 TOP2BQ02880 1626 aa11.34□□□□□ -0.59
MRPS27-201ENST00000261413 HRCP23327 699 aa11.33□□□□□ -0.59
MRPS27-201ENST00000261413 CUX1P39880 1505 aa11.31□□□□□ -0.6
MRPS27-201ENST00000261413 POLA1P09884 1462 aaPredicted RBP11.28□□□□□ -0.6
MRPS27-201ENST00000261413 ABCA10Q8WWZ4 1543 aa11.27□□□□□ -0.61
MRPS27-201ENST00000261413 SUPT5HO00267 1087 aaKnown RBP11.26□□□□□ -0.61
MRPS27-201ENST00000261413 WRNQ14191 1432 aaPredicted RBP eCLIP11.24□□□□□ -0.61
MRPS27-201ENST00000261413 FGD5Q6ZNL6 1462 aa11.24□□□□□ -0.61
MRPS27-201ENST00000261413 ABCA5Q8WWZ7 1642 aa11.24□□□□□ -0.61
MRPS27-201ENST00000261413 EIF4G3O43432 1585 aaKnown RBP11.23□□□□□ -0.61
MRPS27-201ENST00000261413 SOGA1O94964 1423 aa11.21□□□□□ -0.62
MRPS27-201ENST00000261413 MAGI1Q96QZ7 1491 aaPredicted RBP11.2□□□□□ -0.62
MRPS27-201ENST00000261413 SYNJ1O43426 1573 aa11.2□□□□□ -0.62
MRPS27-201ENST00000261413 ERICH3Q5RHP9 1530 aa11.19□□□□□ -0.62
MRPS27-201ENST00000261413 PBRM1Q86U86 1689 aa11.18□□□□□ -0.62
MRPS27-201ENST00000261413 GRIN2BQ13224 1484 aa11.17□□□□□ -0.62
MRPS27-201ENST00000261413 PRKCSHP14314 528 aaPredicted RBP11.16□□□□□ -0.62
MRPS27-201ENST00000261413 DNAJC5Q9H3Z4 198 aa11.14□□□□□ -0.63
MRPS27-201ENST00000261413 CUL7Q14999 1698 aa11.12□□□□□ -0.63
MRPS27-201ENST00000261413 GAPVD1Q14C86 1478 aa11.12□□□□□ -0.63
MRPS27-201ENST00000261413 ZNF608Q9ULD9 1512 aaPredicted RBP11.11□□□□□ -0.63
MRPS27-201ENST00000261413 SYNJ2O15056 1496 aa11.1□□□□□ -0.63
MRPS27-201ENST00000261413 ADAMTS12P58397 1594 aa11.1□□□□□ -0.63
MRPS27-201ENST00000261413 RAD54L2Q9Y4B4 1467 aa11.09□□□□□ -0.63
MRPS27-201ENST00000261413 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
MRPS27-201ENST00000261413 SCAF1Q9H7N4 1312 aaKnown RBP11.07□□□□□ -0.64
MRPS27-201ENST00000261413 FHAD1B1AJZ9 1412 aa11.06□□□□□ -0.64
MRPS27-201ENST00000261413 CHD1O14646 1710 aa11.06□□□□□ -0.64
MRPS27-201ENST00000261413 KIF27Q86VH2 1401 aa11.05□□□□□ -0.64
MRPS27-201ENST00000261413 CLASP1Q7Z460 1538 aa11.05□□□□□ -0.64
MRPS27-201ENST00000261413 EEA1Q15075 1411 aa11.05□□□□□ -0.64
MRPS27-201ENST00000261413 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
MRPS27-201ENST00000261413 AQRO60306 1485 aaKnown RBP eCLIP11.03□□□□□ -0.642e-13■■■■■ 34.2
MRPS27-201ENST00000261413 APLP2Q06481 763 aa11.03□□□□□ -0.64
MRPS27-201ENST00000261413 NUP160Q12769 1436 aa11.01□□□□□ -0.65
MRPS27-201ENST00000261413 SHROOM2Q13796 1616 aa11□□□□□ -0.65
MRPS27-201ENST00000261413 GRIN2AQ12879 1464 aa10.99□□□□□ -0.65
MRPS27-201ENST00000261413 OSCARQ8IYS5 282 aa10.99□□□□□ -0.65
MRPS27-201ENST00000261413 TDRD9Q8NDG6 1382 aaKnown RBP10.98□□□□□ -0.65
MRPS27-201ENST00000261413 BCL11AQ9H165 835 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms