RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 NISCHQ9Y2I1 1504 aa41.38■■■■■ 4.21
CCDC115-201ENST00000259229 CCDC180Q9P1Z9 1646 aa36.34■■■■□ 3.41
CCDC115-201ENST00000259229 ZCCHC6Q5VYS8 1495 aaKnown RBP34.73■■■■□ 3.15
CCDC115-201ENST00000259229 ABCC9O60706 1549 aa34.51■■■■□ 3.12
CCDC115-201ENST00000259229 DCAF1Q9Y4B6 1507 aa34.27■■■■□ 3.08
CCDC115-201ENST00000259229 MYO15BQ96JP2 1530 aa33.99■■■■□ 3.03
CCDC115-201ENST00000259229 DCAF8L2P0C7V8 631 aa33.97■■■■□ 3.03
CCDC115-201ENST00000259229 NACADO15069 1562 aa33.85■■■■□ 3.01
CCDC115-201ENST00000259229 RB1CC1Q8TDY2 1594 aa33.63■■■□□ 2.97
CCDC115-201ENST00000259229 SHROOM4Q9ULL8 1493 aa33.34■■■□□ 2.93
CCDC115-201ENST00000259229 SCRIBQ14160 1630 aa33.27■■■□□ 2.92
CCDC115-201ENST00000259229 UNC13AQ9UPW8 1703 aa33.07■■■□□ 2.88
CCDC115-201ENST00000259229 BICRAQ9NZM4 1560 aa32.71■■■□□ 2.83
CCDC115-201ENST00000259229 PABPN1Q86U42 306 aaKnown RBP eCLIP32.39■■■□□ 2.78
CCDC115-201ENST00000259229 CECR2Q9BXF3 1484 aa32.17■■■□□ 2.74
CCDC115-201ENST00000259229 BAZ1AQ9NRL2 1556 aaPredicted RBP31.97■■■□□ 2.71
CCDC115-201ENST00000259229 MROH2BQ7Z745 1585 aa31.96■■■□□ 2.71
CCDC115-201ENST00000259229 RSF1Q96T23 1441 aaPredicted RBP31.94■■■□□ 2.7
CCDC115-201ENST00000259229 SMARCA4P51532 1647 aa31.92■■■□□ 2.7
CCDC115-201ENST00000259229 SUPT5HO00267 1087 aaKnown RBP31.82■■■□□ 2.69
CCDC115-201ENST00000259229 WIZO95785 1651 aa31.7■■■□□ 2.66
CCDC115-201ENST00000259229 EIF4G1Q04637 1599 aaKnown RBP31.69■■■□□ 2.66
CCDC115-201ENST00000259229 PEG3Q9GZU2 1588 aa31.59■■■□□ 2.65
CCDC115-201ENST00000259229 ATAD2BQ9ULI0 1458 aa31.43■■■□□ 2.62
CCDC115-201ENST00000259229 SMARCA2P51531 1590 aa31.4■■■□□ 2.62
CCDC115-201ENST00000259229 TOP2AP11388 1531 aaKnown RBP31.36■■■□□ 2.61
CCDC115-201ENST00000259229 CC2D2AQ9P2K1 1620 aa31.3■■■□□ 2.6
CCDC115-201ENST00000259229 NCAPD3P42695 1498 aa31.22■■■□□ 2.59
CCDC115-201ENST00000259229 HMGXB3Q12766 1538 aa31.21■■■□□ 2.59
CCDC115-201ENST00000259229 BAZ1BQ9UIG0 1483 aaKnown RBP31.2■■■□□ 2.58
CCDC115-201ENST00000259229 DNAJC5BQ9UF47 199 aa31.01■■■□□ 2.55
CCDC115-201ENST00000259229 CCDC88BA6NC98 1476 aa30.97■■■□□ 2.55
CCDC115-201ENST00000259229 CFTRP13569 1480 aa30.44■■■□□ 2.46
CCDC115-201ENST00000259229 PRDM2Q13029 1718 aa30.38■■■□□ 2.45
CCDC115-201ENST00000259229 CHIC1Q5VXU3 224 aa30.37■■■□□ 2.45
CCDC115-201ENST00000259229 CADPSQ9ULU8 1353 aa30.34■■■□□ 2.45
CCDC115-201ENST00000259229 LAMC3Q9Y6N6 1575 aa30.25■■■□□ 2.43
CCDC115-201ENST00000259229 NESP48681 1621 aa30.24■■■□□ 2.43
CCDC115-201ENST00000259229 ABCC8Q09428 1581 aa30.23■■■□□ 2.43
CCDC115-201ENST00000259229 WRNQ14191 1432 aaPredicted RBP eCLIP30.03■■■□□ 2.4
CCDC115-201ENST00000259229 FANCD2Q9BXW9 1451 aa30.03■■■□□ 2.4
CCDC115-201ENST00000259229 SYNJ1O43426 1573 aa30.02■■■□□ 2.4
CCDC115-201ENST00000259229 TRIM41Q8WV44 630 aa29.96■■■□□ 2.39
CCDC115-201ENST00000259229 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.38
CCDC115-201ENST00000259229 BIVM-ERCC5R4GMW8 1640 aa29.94■■■□□ 2.38
CCDC115-201ENST00000259229 CUX1P39880 1505 aa29.92■■■□□ 2.38
CCDC115-201ENST00000259229 TOP2BQ02880 1626 aa29.92■■■□□ 2.38
CCDC115-201ENST00000259229 PDS5BQ9NTI5 1447 aa29.91■■■□□ 2.38
CCDC115-201ENST00000259229 CEP164Q9UPV0 1460 aa29.88■■■□□ 2.37
CCDC115-201ENST00000259229 DNMBPQ6XZF7 1577 aa29.76■■■□□ 2.35
CCDC115-201ENST00000259229 URB2Q14146 1524 aaKnown RBP29.73■■■□□ 2.35
CCDC115-201ENST00000259229 TOPBP1Q92547 1522 aa29.7■■■□□ 2.34
CCDC115-201ENST00000259229 MRC2Q9UBG0 1479 aa29.62■■■□□ 2.33
CCDC115-201ENST00000259229 FGD5Q6ZNL6 1462 aa29.6■■■□□ 2.33
CCDC115-201ENST00000259229 ERCC6Q03468 1493 aa29.58■■■□□ 2.33
CCDC115-201ENST00000259229 THOC2Q8NI27 1593 aaKnown RBP29.57■■■□□ 2.32
CCDC115-201ENST00000259229 SOGA1O94964 1423 aa29.55■■■□□ 2.32
CCDC115-201ENST00000259229 WDR62O43379 1518 aa29.54■■■□□ 2.32
CCDC115-201ENST00000259229 POLA1P09884 1462 aaPredicted RBP29.53■■■□□ 2.32
CCDC115-201ENST00000259229 RUSC2Q8N2Y8 1516 aa29.49■■■□□ 2.31
CCDC115-201ENST00000259229 WDR97A6NE52 1622 aa29.42■■■□□ 2.3
CCDC115-201ENST00000259229 EEA1Q15075 1411 aa29.41■■■□□ 2.3
CCDC115-201ENST00000259229 RAD54L2Q9Y4B4 1467 aa29.39■■■□□ 2.3
CCDC115-201ENST00000259229 FAM9AQ8IZU1 332 aaPredicted RBP29.38■■■□□ 2.29
CCDC115-201ENST00000259229 ABCA10Q8WWZ4 1543 aa29.36■■■□□ 2.29
CCDC115-201ENST00000259229 TARBP1Q13395 1621 aaKnown RBP29.35■■■□□ 2.29
CCDC115-201ENST00000259229 CUX2O14529 1486 aa29.34■■■□□ 2.29
CCDC115-201ENST00000259229 KIF27Q86VH2 1401 aa29.27■■■□□ 2.28
CCDC115-201ENST00000259229 ABCA5Q8WWZ7 1642 aa29.22■■■□□ 2.27
CCDC115-201ENST00000259229 CSRNP3Q8WYN3 585 aa29.2■■■□□ 2.26
CCDC115-201ENST00000259229 IFT140Q96RY7 1462 aa29.18■■■□□ 2.26
CCDC115-201ENST00000259229 KIF21BO75037 1637 aa29.14■■■□□ 2.26
CCDC115-201ENST00000259229 LOC105371045A0A1W2PR82 267 aa29.14■■■□□ 2.26
CCDC115-201ENST00000259229 TDRD9Q8NDG6 1382 aaKnown RBP29.08■■■□□ 2.25
CCDC115-201ENST00000259229 PRXQ9BXM0 1461 aa29.07■■■□□ 2.24
CCDC115-201ENST00000259229 ZNF608Q9ULD9 1512 aaPredicted RBP29.07■■■□□ 2.24
CCDC115-201ENST00000259229 IGF1RP08069 1367 aa29.07■■■□□ 2.24
CCDC115-201ENST00000259229 GAPVD1Q14C86 1478 aa29.06■■■□□ 2.24
CCDC115-201ENST00000259229 PBRM1Q86U86 1689 aa29.03■■■□□ 2.24
CCDC115-201ENST00000259229 EIF4G3O43432 1585 aaKnown RBP29.02■■■□□ 2.24
CCDC115-201ENST00000259229 ERICH3Q5RHP9 1530 aa29.01■■■□□ 2.23
CCDC115-201ENST00000259229 GOLGA3Q08378 1498 aa28.99■■■□□ 2.23
CCDC115-201ENST00000259229 AQRO60306 1485 aaKnown RBP eCLIP28.99■■■□□ 2.235e-7■■■■■ 27.1
CCDC115-201ENST00000259229 RAPGEF2Q9Y4G8 1499 aa28.99■■■□□ 2.23
CCDC115-201ENST00000259229 CUL7Q14999 1698 aa28.97■■■□□ 2.23
CCDC115-201ENST00000259229 EHMT2Q96KQ7 1210 aa28.94■■■□□ 2.22
CCDC115-201ENST00000259229 GRIN2BQ13224 1484 aa28.89■■■□□ 2.21
CCDC115-201ENST00000259229 CARMIL1Q5VZK9 1371 aa28.88■■■□□ 2.21
CCDC115-201ENST00000259229 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
CCDC115-201ENST00000259229 TNIKQ9UKE5 1360 aa28.81■■■□□ 2.2
CCDC115-201ENST00000259229 SNAPC4Q5SXM2 1469 aa28.76■■■□□ 2.19
CCDC115-201ENST00000259229 FHAD1B1AJZ9 1412 aa28.73■■■□□ 2.19
CCDC115-201ENST00000259229 MAGI1Q96QZ7 1491 aaPredicted RBP28.71■■■□□ 2.19
CCDC115-201ENST00000259229 UBTFP17480 764 aaKnown RBP28.71■■■□□ 2.19
CCDC115-201ENST00000259229 CEP162Q5TB80 1403 aa28.65■■■□□ 2.18
CCDC115-201ENST00000259229 CTTNBP2Q8WZ74 1663 aa28.63■■■□□ 2.17
CCDC115-201ENST00000259229 SYNJ2O15056 1496 aa28.59■■■□□ 2.17
CCDC115-201ENST00000259229 GRIN2AQ12879 1464 aa28.56■■■□□ 2.16
CCDC115-201ENST00000259229 CLIP1P30622 1438 aa28.49■■■□□ 2.15
CCDC115-201ENST00000259229 CHD1O14646 1710 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms