RNA–Protein interactions for RNA: ENST00000248451.7

PNKD-201, Transcript of PNKD, MBL domain containing, humanhuman

TSL 1 (best) BASIC

Gene PNKD, Length 758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-201ENST00000248451 NISCHQ9Y2I1 1504 aa40.05■■■■■ 4
PNKD-201ENST00000248451 CCDC180Q9P1Z9 1646 aa35.9■■■■□ 3.34
PNKD-201ENST00000248451 ABCC9O60706 1549 aa35.63■■■■□ 3.29
PNKD-201ENST00000248451 RB1CC1Q8TDY2 1594 aa34.02■■■■□ 3.04
PNKD-201ENST00000248451 NACADO15069 1562 aa33.85■■■■□ 3.01
PNKD-201ENST00000248451 DCAF8L2P0C7V8 631 aa33.5■■■□□ 2.95
PNKD-201ENST00000248451 MYO15BQ96JP2 1530 aa33.48■■■□□ 2.95
PNKD-201ENST00000248451 UNC13AQ9UPW8 1703 aa33.36■■■□□ 2.93
PNKD-201ENST00000248451 ZCCHC6Q5VYS8 1495 aaKnown RBP33.27■■■□□ 2.92
PNKD-201ENST00000248451 DNAJC5BQ9UF47 199 aa33.26■■■□□ 2.91
PNKD-201ENST00000248451 PABPN1Q86U42 306 aaKnown RBP eCLIP33.14■■■□□ 2.9
PNKD-201ENST00000248451 DCAF1Q9Y4B6 1507 aa33.12■■■□□ 2.89
PNKD-201ENST00000248451 BICRAQ9NZM4 1560 aa33.1■■■□□ 2.89
PNKD-201ENST00000248451 SCRIBQ14160 1630 aa32.69■■■□□ 2.82
PNKD-201ENST00000248451 SHROOM4Q9ULL8 1493 aa32.65■■■□□ 2.82
PNKD-201ENST00000248451 CC2D2AQ9P2K1 1620 aa32.24■■■□□ 2.75
PNKD-201ENST00000248451 EIF4G1Q04637 1599 aaKnown RBP32.23■■■□□ 2.75
PNKD-201ENST00000248451 CECR2Q9BXF3 1484 aa32.08■■■□□ 2.73
PNKD-201ENST00000248451 NCAPD3P42695 1498 aa31.24■■■□□ 2.59
PNKD-201ENST00000248451 SMARCA4P51532 1647 aa31.22■■■□□ 2.59
PNKD-201ENST00000248451 ATAD2BQ9ULI0 1458 aa31.18■■■□□ 2.58
PNKD-201ENST00000248451 SMARCA2P51531 1590 aa31.09■■■□□ 2.57
PNKD-201ENST00000248451 BAZ1AQ9NRL2 1556 aaPredicted RBP31.06■■■□□ 2.56
PNKD-201ENST00000248451 HMGXB3Q12766 1538 aa31.06■■■□□ 2.56
PNKD-201ENST00000248451 PEG3Q9GZU2 1588 aa30.95■■■□□ 2.54
PNKD-201ENST00000248451 MROH2BQ7Z745 1585 aa30.87■■■□□ 2.53
PNKD-201ENST00000248451 BAZ1BQ9UIG0 1483 aaKnown RBP30.85■■■□□ 2.53
PNKD-201ENST00000248451 ERCC6Q03468 1493 aa30.71■■■□□ 2.51
PNKD-201ENST00000248451 NESP48681 1621 aa30.69■■■□□ 2.5
PNKD-201ENST00000248451 CUX2O14529 1486 aa30.65■■■□□ 2.5
PNKD-201ENST00000248451 WIZO95785 1651 aa30.52■■■□□ 2.48
PNKD-201ENST00000248451 LAMC3Q9Y6N6 1575 aa30.51■■■□□ 2.47
PNKD-201ENST00000248451 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
PNKD-201ENST00000248451 DNAJC5Q9H3Z4 198 aa30.36■■■□□ 2.45
PNKD-201ENST00000248451 KIF21AQ7Z4S6 1674 aa30.35■■■□□ 2.45
PNKD-201ENST00000248451 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
PNKD-201ENST00000248451 PDS5BQ9NTI5 1447 aa30.26■■■□□ 2.43
PNKD-201ENST00000248451 CADPSQ9ULU8 1353 aa30.26■■■□□ 2.43
PNKD-201ENST00000248451 TOP2AP11388 1531 aaKnown RBP30.15■■■□□ 2.42
PNKD-201ENST00000248451 MRC2Q9UBG0 1479 aa30.05■■■□□ 2.4
PNKD-201ENST00000248451 WDR62O43379 1518 aa30.01■■■□□ 2.39
PNKD-201ENST00000248451 CFTRP13569 1480 aa29.99■■■□□ 2.39
PNKD-201ENST00000248451 CEP164Q9UPV0 1460 aa29.95■■■□□ 2.39
PNKD-201ENST00000248451 FANCD2Q9BXW9 1451 aa29.93■■■□□ 2.38
PNKD-201ENST00000248451 PRDM2Q13029 1718 aa29.79■■■□□ 2.36
PNKD-201ENST00000248451 CCDC88BA6NC98 1476 aa29.76■■■□□ 2.35
PNKD-201ENST00000248451 URB2Q14146 1524 aaKnown RBP29.72■■■□□ 2.35
PNKD-201ENST00000248451 TOPBP1Q92547 1522 aa29.42■■■□□ 2.3
PNKD-201ENST00000248451 IFT140Q96RY7 1462 aa29.35■■■□□ 2.29
PNKD-201ENST00000248451 DNMBPQ6XZF7 1577 aa29.34■■■□□ 2.29
PNKD-201ENST00000248451 ABCC8Q09428 1581 aa29.31■■■□□ 2.28
PNKD-201ENST00000248451 ZNF608Q9ULD9 1512 aaPredicted RBP29.31■■■□□ 2.28
PNKD-201ENST00000248451 EIF4G3O43432 1585 aaKnown RBP29.19■■■□□ 2.26
PNKD-201ENST00000248451 TARBP1Q13395 1621 aaKnown RBP29.18■■■□□ 2.26
PNKD-201ENST00000248451 OSCARQ8IYS5 282 aa29.17■■■□□ 2.26
PNKD-201ENST00000248451 POLA1P09884 1462 aaPredicted RBP29.13■■■□□ 2.25
PNKD-201ENST00000248451 TRIM41Q8WV44 630 aa29.04■■■□□ 2.24
PNKD-201ENST00000248451 AQRO60306 1485 aaKnown RBP eCLIP29.02■■■□□ 2.24
PNKD-201ENST00000248451 RAD54L2Q9Y4B4 1467 aa29■■■□□ 2.23
PNKD-201ENST00000248451 CUX1P39880 1505 aa28.99■■■□□ 2.23
PNKD-201ENST00000248451 FGD5Q6ZNL6 1462 aa28.97■■■□□ 2.23
PNKD-201ENST00000248451 CHD1O14646 1710 aa28.94■■■□□ 2.22
PNKD-201ENST00000248451 SOGA1O94964 1423 aa28.94■■■□□ 2.22
PNKD-201ENST00000248451 SUPT5HO00267 1087 aaKnown RBP28.93■■■□□ 2.22
PNKD-201ENST00000248451 RIMBP3CA6NJZ7 1639 aa28.91■■■□□ 2.22
PNKD-201ENST00000248451 RIMBP3BA6NNM3 1639 aa28.91■■■□□ 2.22
PNKD-201ENST00000248451 RIMBP3Q9UFD9 1639 aa28.91■■■□□ 2.22
PNKD-201ENST00000248451 WDR97A6NE52 1622 aa28.89■■■□□ 2.22
PNKD-201ENST00000248451 TDRD9Q8NDG6 1382 aaKnown RBP28.86■■■□□ 2.21
PNKD-201ENST00000248451 ARHGEF11O15085 1522 aa28.83■■■□□ 2.21
PNKD-201ENST00000248451 SNAPC4Q5SXM2 1469 aa28.77■■■□□ 2.2
PNKD-201ENST00000248451 GRIN2BQ13224 1484 aa28.7■■■□□ 2.18
PNKD-201ENST00000248451 MAGI1Q96QZ7 1491 aaPredicted RBP28.7■■■□□ 2.18
PNKD-201ENST00000248451 FBLN2P98095 1184 aa28.68■■■□□ 2.18
PNKD-201ENST00000248451 PBRM1Q86U86 1689 aa28.67■■■□□ 2.18
PNKD-201ENST00000248451 ABCA10Q8WWZ4 1543 aa28.66■■■□□ 2.18
PNKD-201ENST00000248451 ABCA5Q8WWZ7 1642 aa28.65■■■□□ 2.18
PNKD-201ENST00000248451 CLASP1Q7Z460 1538 aa28.62■■■□□ 2.17
PNKD-201ENST00000248451 GAPVD1Q14C86 1478 aa28.61■■■□□ 2.17
PNKD-201ENST00000248451 BIVM-ERCC5R4GMW8 1640 aa28.61■■■□□ 2.17
PNKD-201ENST00000248451 SYNJ2O15056 1496 aa28.59■■■□□ 2.17
PNKD-201ENST00000248451 TOP2BQ02880 1626 aa28.58■■■□□ 2.17
PNKD-201ENST00000248451 ARAP1Q96P48 1450 aa28.58■■■□□ 2.17
PNKD-201ENST00000248451 SYNJ1O43426 1573 aa28.57■■■□□ 2.16
PNKD-201ENST00000248451 WRNQ14191 1432 aaPredicted RBP eCLIP28.53■■■□□ 2.16
PNKD-201ENST00000248451 CHMP7Q8WUX9 453 aaPredicted RBP28.52■■■□□ 2.16
PNKD-201ENST00000248451 CYB5RLQ6IPT4 315 aa28.48■■■□□ 2.15
PNKD-201ENST00000248451 ADAMTS12P58397 1594 aa28.41■■■□□ 2.14
PNKD-201ENST00000248451 GRIN2AQ12879 1464 aa28.34■■■□□ 2.13
PNKD-201ENST00000248451 ERICH3Q5RHP9 1530 aa28.3■■■□□ 2.12
PNKD-201ENST00000248451 CEP170Q5SW79 1584 aa28.28■■■□□ 2.12
PNKD-201ENST00000248451 FHAD1B1AJZ9 1412 aa28.26■■■□□ 2.12
PNKD-201ENST00000248451 NUP160Q12769 1436 aa28.26■■■□□ 2.12
PNKD-201ENST00000248451 ERCC6L2Q5T890 1561 aa28.18■■■□□ 2.1
PNKD-201ENST00000248451 SHROOM2Q13796 1616 aa28.16■■■□□ 2.1
PNKD-201ENST00000248451 TRHP20396 242 aaPredicted RBP28.05■■■□□ 2.08
PNKD-201ENST00000248451 RUSC2Q8N2Y8 1516 aa28.02■■■□□ 2.08
PNKD-201ENST00000248451 KIF27Q86VH2 1401 aa27.95■■■□□ 2.07
PNKD-201ENST00000248451 IGF1RP08069 1367 aa27.94■■■□□ 2.06
PNKD-201ENST00000248451 CUL7Q14999 1698 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms