RNA–Protein interactions for RNA: ENST00000245857.9

RPL23-201, Transcript of ribosomal protein L23, humanhuman

TSL 3 BASIC

Gene RPL23, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23-201ENST00000245857 NISCHQ9Y2I1 1504 aa24.11■■□□□ 1.45
RPL23-201ENST00000245857 CCDC180Q9P1Z9 1646 aa21.54■■□□□ 1.04
RPL23-201ENST00000245857 ABCC9O60706 1549 aa21.06■□□□□ 0.96
RPL23-201ENST00000245857 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
RPL23-201ENST00000245857 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
RPL23-201ENST00000245857 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
RPL23-201ENST00000245857 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
RPL23-201ENST00000245857 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
RPL23-201ENST00000245857 NACADO15069 1562 aa20.12■□□□□ 0.81
RPL23-201ENST00000245857 PABPN1Q86U42 306 aaKnown RBP eCLIP19.75■□□□□ 0.75
RPL23-201ENST00000245857 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
RPL23-201ENST00000245857 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
RPL23-201ENST00000245857 SCRIBQ14160 1630 aa19.55■□□□□ 0.72
RPL23-201ENST00000245857 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
RPL23-201ENST00000245857 SHROOM4Q9ULL8 1493 aa19.43■□□□□ 0.7
RPL23-201ENST00000245857 EIF4G1Q04637 1599 aaKnown RBP19.06■□□□□ 0.64
RPL23-201ENST00000245857 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
RPL23-201ENST00000245857 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
RPL23-201ENST00000245857 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.6
RPL23-201ENST00000245857 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
RPL23-201ENST00000245857 ATAD2BQ9ULI0 1458 aa18.64■□□□□ 0.57
RPL23-201ENST00000245857 NCAPD3P42695 1498 aa18.63■□□□□ 0.57
RPL23-201ENST00000245857 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
RPL23-201ENST00000245857 PEG3Q9GZU2 1588 aa18.61■□□□□ 0.57
RPL23-201ENST00000245857 SMARCA2P51531 1590 aa18.59■□□□□ 0.57
RPL23-201ENST00000245857 HMGXB3Q12766 1538 aa18.48■□□□□ 0.55
RPL23-201ENST00000245857 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.54
RPL23-201ENST00000245857 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
RPL23-201ENST00000245857 WIZO95785 1651 aa18.37■□□□□ 0.53
RPL23-201ENST00000245857 TOP2AP11388 1531 aaKnown RBP18.28■□□□□ 0.52
RPL23-201ENST00000245857 NESP48681 1621 aa18.23■□□□□ 0.51
RPL23-201ENST00000245857 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
RPL23-201ENST00000245857 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
RPL23-201ENST00000245857 LAMC3Q9Y6N6 1575 aa18.07■□□□□ 0.48
RPL23-201ENST00000245857 CCDC88BA6NC98 1476 aa18■□□□□ 0.47
RPL23-201ENST00000245857 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
RPL23-201ENST00000245857 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
RPL23-201ENST00000245857 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
RPL23-201ENST00000245857 CFTRP13569 1480 aa17.96■□□□□ 0.47
RPL23-201ENST00000245857 CUX2O14529 1486 aa17.91■□□□□ 0.46
RPL23-201ENST00000245857 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
RPL23-201ENST00000245857 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
RPL23-201ENST00000245857 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
RPL23-201ENST00000245857 MRC2Q9UBG0 1479 aa17.82■□□□□ 0.44
RPL23-201ENST00000245857 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
RPL23-201ENST00000245857 WDR62O43379 1518 aa17.74■□□□□ 0.43
RPL23-201ENST00000245857 URB2Q14146 1524 aaKnown RBP17.71■□□□□ 0.43
RPL23-201ENST00000245857 ABCC8Q09428 1581 aa17.64■□□□□ 0.41
RPL23-201ENST00000245857 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
RPL23-201ENST00000245857 DNMBPQ6XZF7 1577 aa17.51■□□□□ 0.39
RPL23-201ENST00000245857 DNAJC5Q9H3Z4 198 aa17.51■□□□□ 0.39
RPL23-201ENST00000245857 BIVM-ERCC5R4GMW8 1640 aa17.46■□□□□ 0.39
RPL23-201ENST00000245857 IFT140Q96RY7 1462 aa17.45■□□□□ 0.38
RPL23-201ENST00000245857 CUX1P39880 1505 aa17.45■□□□□ 0.38
RPL23-201ENST00000245857 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
RPL23-201ENST00000245857 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
RPL23-201ENST00000245857 TOP2BQ02880 1626 aa17.43■□□□□ 0.38
RPL23-201ENST00000245857 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
RPL23-201ENST00000245857 RAD54L2Q9Y4B4 1467 aa17.4■□□□□ 0.38
RPL23-201ENST00000245857 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
RPL23-201ENST00000245857 FGD5Q6ZNL6 1462 aa17.38■□□□□ 0.37
RPL23-201ENST00000245857 SOGA1O94964 1423 aa17.38■□□□□ 0.37
RPL23-201ENST00000245857 AQRO60306 1485 aaKnown RBP eCLIP17.36■□□□□ 0.375e-9■■■■□ 24.9
RPL23-201ENST00000245857 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
RPL23-201ENST00000245857 TDRD9Q8NDG6 1382 aaKnown RBP17.33■□□□□ 0.36
RPL23-201ENST00000245857 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
RPL23-201ENST00000245857 EIF4G3O43432 1585 aaKnown RBP17.28■□□□□ 0.36
RPL23-201ENST00000245857 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
RPL23-201ENST00000245857 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
RPL23-201ENST00000245857 FBLN2P98095 1184 aa17.15■□□□□ 0.34
RPL23-201ENST00000245857 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
RPL23-201ENST00000245857 GRIN2BQ13224 1484 aa17.14■□□□□ 0.33
RPL23-201ENST00000245857 SNAPC4Q5SXM2 1469 aa17.14■□□□□ 0.33
RPL23-201ENST00000245857 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
RPL23-201ENST00000245857 EEA1Q15075 1411 aa17.13■□□□□ 0.33
RPL23-201ENST00000245857 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
RPL23-201ENST00000245857 MAGI1Q96QZ7 1491 aaPredicted RBP17.08■□□□□ 0.32
RPL23-201ENST00000245857 KIF27Q86VH2 1401 aa17.08■□□□□ 0.32
RPL23-201ENST00000245857 CHMP7Q8WUX9 453 aaPredicted RBP17.08■□□□□ 0.32
RPL23-201ENST00000245857 ERICH3Q5RHP9 1530 aa17.07■□□□□ 0.32
RPL23-201ENST00000245857 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
RPL23-201ENST00000245857 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
RPL23-201ENST00000245857 CHD1O14646 1710 aa17.04■□□□□ 0.32
RPL23-201ENST00000245857 SYNJ2O15056 1496 aa17.04■□□□□ 0.32
RPL23-201ENST00000245857 CUL7Q14999 1698 aa17.04■□□□□ 0.32
RPL23-201ENST00000245857 FHAD1B1AJZ9 1412 aa16.95■□□□□ 0.3
RPL23-201ENST00000245857 IGF1RP08069 1367 aa16.94■□□□□ 0.3
RPL23-201ENST00000245857 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
RPL23-201ENST00000245857 GRIN2AQ12879 1464 aa16.93■□□□□ 0.3
RPL23-201ENST00000245857 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
RPL23-201ENST00000245857 CLASP1Q7Z460 1538 aa16.91■□□□□ 0.3
RPL23-201ENST00000245857 RIMBP3CA6NJZ7 1639 aa16.9■□□□□ 0.3
RPL23-201ENST00000245857 RIMBP3BA6NNM3 1639 aa16.9■□□□□ 0.3
RPL23-201ENST00000245857 RIMBP3Q9UFD9 1639 aa16.9■□□□□ 0.3
RPL23-201ENST00000245857 NUP160Q12769 1436 aa16.87■□□□□ 0.29
RPL23-201ENST00000245857 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
RPL23-201ENST00000245857 CEP170Q5SW79 1584 aa16.85■□□□□ 0.29
RPL23-201ENST00000245857 KIF21BO75037 1637 aa16.85■□□□□ 0.29
RPL23-201ENST00000245857 CYB5RLQ6IPT4 315 aa16.84■□□□□ 0.29
RPL23-201ENST00000245857 CARMIL1Q5VZK9 1371 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms