RNA–Protein interactions for RNA: ENST00000244070.7

PPP4R1L-201, Transcript of protein phosphatase 4 regulatory subunit 1 like (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene PPP4R1L, Length 1,474 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1L-201ENST00000244070 NISCHQ9Y2I1 1504 aa29.41■■■□□ 2.3
PPP4R1L-201ENST00000244070 ABCC9O60706 1549 aa26.77■■□□□ 1.88
PPP4R1L-201ENST00000244070 CCDC180Q9P1Z9 1646 aa26.54■■□□□ 1.84
PPP4R1L-201ENST00000244070 DNAJC5BQ9UF47 199 aa25.37■■□□□ 1.65
PPP4R1L-201ENST00000244070 RB1CC1Q8TDY2 1594 aa25.35■■□□□ 1.65
PPP4R1L-201ENST00000244070 NACADO15069 1562 aa25.11■■□□□ 1.61
PPP4R1L-201ENST00000244070 UNC13AQ9UPW8 1703 aa24.91■■□□□ 1.58
PPP4R1L-201ENST00000244070 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.57
PPP4R1L-201ENST00000244070 DCAF8L2P0C7V8 631 aa24.84■■□□□ 1.57
PPP4R1L-201ENST00000244070 BICRAQ9NZM4 1560 aa24.69■■□□□ 1.54
PPP4R1L-201ENST00000244070 MYO15BQ96JP2 1530 aa24.67■■□□□ 1.54
PPP4R1L-201ENST00000244070 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.49
PPP4R1L-201ENST00000244070 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
PPP4R1L-201ENST00000244070 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
PPP4R1L-201ENST00000244070 CC2D2AQ9P2K1 1620 aa24.2■■□□□ 1.46
PPP4R1L-201ENST00000244070 SCRIBQ14160 1630 aa24.17■■□□□ 1.46
PPP4R1L-201ENST00000244070 CECR2Q9BXF3 1484 aa24.13■■□□□ 1.45
PPP4R1L-201ENST00000244070 EIF4G1Q04637 1599 aaKnown RBP24.07■■□□□ 1.44
PPP4R1L-201ENST00000244070 DNAJC5Q9H3Z4 198 aa23.43■■□□□ 1.34
PPP4R1L-201ENST00000244070 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
PPP4R1L-201ENST00000244070 CUX2O14529 1486 aa23.15■■□□□ 1.3
PPP4R1L-201ENST00000244070 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
PPP4R1L-201ENST00000244070 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.29
PPP4R1L-201ENST00000244070 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
PPP4R1L-201ENST00000244070 HMGXB3Q12766 1538 aa23■■□□□ 1.27
PPP4R1L-201ENST00000244070 SMARCA2P51531 1590 aa22.99■■□□□ 1.27
PPP4R1L-201ENST00000244070 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
PPP4R1L-201ENST00000244070 NESP48681 1621 aa22.95■■□□□ 1.26
PPP4R1L-201ENST00000244070 BAZ1BQ9UIG0 1483 aaKnown RBP22.83■■□□□ 1.24
PPP4R1L-201ENST00000244070 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.24
PPP4R1L-201ENST00000244070 THOC2Q8NI27 1593 aaKnown RBP22.8■■□□□ 1.24
PPP4R1L-201ENST00000244070 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
PPP4R1L-201ENST00000244070 LAMC3Q9Y6N6 1575 aa22.71■■□□□ 1.23
PPP4R1L-201ENST00000244070 KIF21AQ7Z4S6 1674 aa22.69■■□□□ 1.22
PPP4R1L-201ENST00000244070 MROH2BQ7Z745 1585 aa22.68■■□□□ 1.22
PPP4R1L-201ENST00000244070 PDS5BQ9NTI5 1447 aa22.54■■□□□ 1.2
PPP4R1L-201ENST00000244070 CADPSQ9ULU8 1353 aa22.44■■□□□ 1.18
PPP4R1L-201ENST00000244070 WIZO95785 1651 aa22.42■■□□□ 1.18
PPP4R1L-201ENST00000244070 MRC2Q9UBG0 1479 aa22.4■■□□□ 1.18
PPP4R1L-201ENST00000244070 WDR62O43379 1518 aa22.38■■□□□ 1.17
PPP4R1L-201ENST00000244070 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
PPP4R1L-201ENST00000244070 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
PPP4R1L-201ENST00000244070 FANCD2Q9BXW9 1451 aa22.21■■□□□ 1.15
PPP4R1L-201ENST00000244070 CFTRP13569 1480 aa22.15■■□□□ 1.14
PPP4R1L-201ENST00000244070 RSF1Q96T23 1441 aaPredicted RBP22.08■■□□□ 1.13
PPP4R1L-201ENST00000244070 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.12
PPP4R1L-201ENST00000244070 URB2Q14146 1524 aaKnown RBP22.08■■□□□ 1.12
PPP4R1L-201ENST00000244070 PRDM2Q13029 1718 aa22■■□□□ 1.11
PPP4R1L-201ENST00000244070 OSCARQ8IYS5 282 aa22■■□□□ 1.11
PPP4R1L-201ENST00000244070 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
PPP4R1L-201ENST00000244070 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
PPP4R1L-201ENST00000244070 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
PPP4R1L-201ENST00000244070 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
PPP4R1L-201ENST00000244070 CCDC88BA6NC98 1476 aa21.82■■□□□ 1.08
PPP4R1L-201ENST00000244070 IFT140Q96RY7 1462 aa21.8■■□□□ 1.08
PPP4R1L-201ENST00000244070 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
PPP4R1L-201ENST00000244070 EIF4G3O43432 1585 aaKnown RBP21.73■■□□□ 1.07
PPP4R1L-201ENST00000244070 ARHGEF11O15085 1522 aa21.73■■□□□ 1.07
PPP4R1L-201ENST00000244070 DNMBPQ6XZF7 1577 aa21.67■■□□□ 1.06
PPP4R1L-201ENST00000244070 CHD1O14646 1710 aa21.66■■□□□ 1.06
PPP4R1L-201ENST00000244070 ABCC8Q09428 1581 aa21.65■■□□□ 1.06
PPP4R1L-201ENST00000244070 TARBP1Q13395 1621 aaKnown RBP21.64■■□□□ 1.06
PPP4R1L-201ENST00000244070 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.05
PPP4R1L-201ENST00000244070 POLA1P09884 1462 aaPredicted RBP21.54■■□□□ 1.04
PPP4R1L-201ENST00000244070 CYB5RLQ6IPT4 315 aa21.52■■□□□ 1.04
PPP4R1L-201ENST00000244070 ARAP1Q96P48 1450 aa21.51■■□□□ 1.03
PPP4R1L-201ENST00000244070 RAD54L2Q9Y4B4 1467 aa21.47■■□□□ 1.03
PPP4R1L-201ENST00000244070 CHIC1Q5VXU3 224 aa21.46■■□□□ 1.03
PPP4R1L-201ENST00000244070 FBLN2P98095 1184 aa21.44■■□□□ 1.02
PPP4R1L-201ENST00000244070 TDRD9Q8NDG6 1382 aaKnown RBP21.4■■□□□ 1.02
PPP4R1L-201ENST00000244070 SOGA1O94964 1423 aa21.39■■□□□ 1.01
PPP4R1L-201ENST00000244070 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
PPP4R1L-201ENST00000244070 CLASP1Q7Z460 1538 aa21.36■■□□□ 1.01
PPP4R1L-201ENST00000244070 FGD5Q6ZNL6 1462 aa21.36■■□□□ 1.01
PPP4R1L-201ENST00000244070 WDR97A6NE52 1622 aa21.35■■□□□ 1.01
PPP4R1L-201ENST00000244070 TRHP20396 242 aaPredicted RBP21.34■■□□□ 1.01
PPP4R1L-201ENST00000244070 CUX1P39880 1505 aa21.32■■□□□ 1
PPP4R1L-201ENST00000244070 MAGI1Q96QZ7 1491 aaPredicted RBP21.28■■□□□ 1
PPP4R1L-201ENST00000244070 SYNJ1O43426 1573 aa21.28■■□□□ 1
PPP4R1L-201ENST00000244070 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
PPP4R1L-201ENST00000244070 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
PPP4R1L-201ENST00000244070 CHMP7Q8WUX9 453 aaPredicted RBP21.23■□□□□ 0.99
PPP4R1L-201ENST00000244070 SYNJ2O15056 1496 aa21.22■□□□□ 0.99
PPP4R1L-201ENST00000244070 GAPVD1Q14C86 1478 aa21.15■□□□□ 0.98
PPP4R1L-201ENST00000244070 ABCA5Q8WWZ7 1642 aa21.13■□□□□ 0.97
PPP4R1L-201ENST00000244070 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
PPP4R1L-201ENST00000244070 ERCC6L2Q5T890 1561 aa21.04■□□□□ 0.96
PPP4R1L-201ENST00000244070 GRIN2AQ12879 1464 aa21■□□□□ 0.95
PPP4R1L-201ENST00000244070 ADAMTS12P58397 1594 aa20.99■□□□□ 0.95
PPP4R1L-201ENST00000244070 CEP170Q5SW79 1584 aa20.98■□□□□ 0.95
PPP4R1L-201ENST00000244070 NUP160Q12769 1436 aa20.94■□□□□ 0.94
PPP4R1L-201ENST00000244070 BIVM-ERCC5R4GMW8 1640 aa20.92■□□□□ 0.94
PPP4R1L-201ENST00000244070 WRNQ14191 1432 aaPredicted RBP eCLIP20.92■□□□□ 0.94
PPP4R1L-201ENST00000244070 SHROOM2Q13796 1616 aa20.92■□□□□ 0.94
PPP4R1L-201ENST00000244070 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
PPP4R1L-201ENST00000244070 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
PPP4R1L-201ENST00000244070 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
PPP4R1L-201ENST00000244070 KIF13AQ9H1H9 1805 aa20.83■□□□□ 0.93
PPP4R1L-201ENST00000244070 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
PPP4R1L-201ENST00000244070 PRG4Q92954 1404 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms