RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 NISCHQ9Y2I1 1504 aa25.99■■□□□ 1.75
PFDN5-201ENST00000243040 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
PFDN5-201ENST00000243040 ABCC9O60706 1549 aa22.5■■□□□ 1.19
PFDN5-201ENST00000243040 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
PFDN5-201ENST00000243040 NACADO15069 1562 aa21.74■■□□□ 1.07
PFDN5-201ENST00000243040 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
PFDN5-201ENST00000243040 MYO15BQ96JP2 1530 aa21.66■■□□□ 1.06
PFDN5-201ENST00000243040 DCAF1Q9Y4B6 1507 aa21.57■■□□□ 1.04
PFDN5-201ENST00000243040 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
PFDN5-201ENST00000243040 UNC13AQ9UPW8 1703 aa21.34■■□□□ 1.01
PFDN5-201ENST00000243040 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
PFDN5-201ENST00000243040 SCRIBQ14160 1630 aa21.07■□□□□ 0.96
PFDN5-201ENST00000243040 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
PFDN5-201ENST00000243040 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
PFDN5-201ENST00000243040 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
PFDN5-201ENST00000243040 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
PFDN5-201ENST00000243040 CC2D2AQ9P2K1 1620 aa20.43■□□□□ 0.86
PFDN5-201ENST00000243040 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
PFDN5-201ENST00000243040 SMARCA4P51532 1647 aa20.2■□□□□ 0.82
PFDN5-201ENST00000243040 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
PFDN5-201ENST00000243040 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
PFDN5-201ENST00000243040 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
PFDN5-201ENST00000243040 ATAD2BQ9ULI0 1458 aa20.03■□□□□ 0.8
PFDN5-201ENST00000243040 NCAPD3P42695 1498 aa20.02■□□□□ 0.8
PFDN5-201ENST00000243040 MROH2BQ7Z745 1585 aa20.01■□□□□ 0.79
PFDN5-201ENST00000243040 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
PFDN5-201ENST00000243040 BAZ1BQ9UIG0 1483 aaKnown RBP19.86■□□□□ 0.77
PFDN5-201ENST00000243040 WIZO95785 1651 aa19.82■□□□□ 0.76
PFDN5-201ENST00000243040 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
PFDN5-201ENST00000243040 TOP2AP11388 1531 aaKnown RBP19.63■□□□□ 0.73
PFDN5-201ENST00000243040 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
PFDN5-201ENST00000243040 NESP48681 1621 aa19.49■□□□□ 0.71
PFDN5-201ENST00000243040 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
PFDN5-201ENST00000243040 ERCC6Q03468 1493 aa19.4■□□□□ 0.7
PFDN5-201ENST00000243040 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
PFDN5-201ENST00000243040 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
PFDN5-201ENST00000243040 CCDC88BA6NC98 1476 aa19.34■□□□□ 0.69
PFDN5-201ENST00000243040 CFTRP13569 1480 aa19.34■□□□□ 0.69
PFDN5-201ENST00000243040 PDS5BQ9NTI5 1447 aa19.33■□□□□ 0.68
PFDN5-201ENST00000243040 THOC2Q8NI27 1593 aaKnown RBP19.3■□□□□ 0.68
PFDN5-201ENST00000243040 CUX2O14529 1486 aa19.25■□□□□ 0.67
PFDN5-201ENST00000243040 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
PFDN5-201ENST00000243040 CEP164Q9UPV0 1460 aa19.19■□□□□ 0.66
PFDN5-201ENST00000243040 MRC2Q9UBG0 1479 aa19.16■□□□□ 0.66
PFDN5-201ENST00000243040 SUPT5HO00267 1087 aaKnown RBP19.15■□□□□ 0.66
PFDN5-201ENST00000243040 WDR62O43379 1518 aa19.14■□□□□ 0.65
PFDN5-201ENST00000243040 URB2Q14146 1524 aaKnown RBP19.01■□□□□ 0.63
PFDN5-201ENST00000243040 ABCC8Q09428 1581 aa18.93■□□□□ 0.62
PFDN5-201ENST00000243040 DNMBPQ6XZF7 1577 aa18.93■□□□□ 0.62
PFDN5-201ENST00000243040 TOPBP1Q92547 1522 aa18.91■□□□□ 0.62
PFDN5-201ENST00000243040 CUX1P39880 1505 aa18.79■□□□□ 0.6
PFDN5-201ENST00000243040 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
PFDN5-201ENST00000243040 POLA1P09884 1462 aaPredicted RBP18.76■□□□□ 0.59
PFDN5-201ENST00000243040 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
PFDN5-201ENST00000243040 FGD5Q6ZNL6 1462 aa18.71■□□□□ 0.59
PFDN5-201ENST00000243040 BIVM-ERCC5R4GMW8 1640 aa18.71■□□□□ 0.58
PFDN5-201ENST00000243040 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
PFDN5-201ENST00000243040 ZNF608Q9ULD9 1512 aaPredicted RBP18.67■□□□□ 0.58
PFDN5-201ENST00000243040 WDR97A6NE52 1622 aa18.67■□□□□ 0.58
PFDN5-201ENST00000243040 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
PFDN5-201ENST00000243040 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.583e-8■□□□□ 9.6
PFDN5-201ENST00000243040 SYNJ1O43426 1573 aa18.64■□□□□ 0.58
PFDN5-201ENST00000243040 SOGA1O94964 1423 aa18.62■□□□□ 0.57
PFDN5-201ENST00000243040 RAD54L2Q9Y4B4 1467 aa18.62■□□□□ 0.57
PFDN5-201ENST00000243040 ABCA10Q8WWZ4 1543 aa18.55■□□□□ 0.56
PFDN5-201ENST00000243040 AQRO60306 1485 aaKnown RBP eCLIP18.53■□□□□ 0.566e-7■■■■■ 32.7
PFDN5-201ENST00000243040 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
PFDN5-201ENST00000243040 DNAJC5Q9H3Z4 198 aa18.51■□□□□ 0.55
PFDN5-201ENST00000243040 PBRM1Q86U86 1689 aa18.5■□□□□ 0.55
PFDN5-201ENST00000243040 TDRD9Q8NDG6 1382 aaKnown RBP18.47■□□□□ 0.55
PFDN5-201ENST00000243040 CHD1O14646 1710 aa18.45■□□□□ 0.54
PFDN5-201ENST00000243040 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
PFDN5-201ENST00000243040 GAPVD1Q14C86 1478 aa18.44■□□□□ 0.54
PFDN5-201ENST00000243040 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
PFDN5-201ENST00000243040 SNAPC4Q5SXM2 1469 aa18.41■□□□□ 0.54
PFDN5-201ENST00000243040 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
PFDN5-201ENST00000243040 SYNJ2O15056 1496 aa18.33■□□□□ 0.53
PFDN5-201ENST00000243040 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
PFDN5-201ENST00000243040 ADAMTS12P58397 1594 aa18.33■□□□□ 0.52
PFDN5-201ENST00000243040 KIF27Q86VH2 1401 aa18.23■□□□□ 0.51
PFDN5-201ENST00000243040 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
PFDN5-201ENST00000243040 FHAD1B1AJZ9 1412 aa18.23■□□□□ 0.51
PFDN5-201ENST00000243040 CUL7Q14999 1698 aa18.22■□□□□ 0.51
PFDN5-201ENST00000243040 GRIN2AQ12879 1464 aa18.22■□□□□ 0.51
PFDN5-201ENST00000243040 FBLN2P98095 1184 aa18.21■□□□□ 0.51
PFDN5-201ENST00000243040 CHMP7Q8WUX9 453 aaPredicted RBP18.21■□□□□ 0.51
PFDN5-201ENST00000243040 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
PFDN5-201ENST00000243040 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
PFDN5-201ENST00000243040 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
PFDN5-201ENST00000243040 CEP170Q5SW79 1584 aa18.15■□□□□ 0.5
PFDN5-201ENST00000243040 NUP160Q12769 1436 aa18.15■□□□□ 0.5
PFDN5-201ENST00000243040 ARHGEF11O15085 1522 aa18.14■□□□□ 0.49
PFDN5-201ENST00000243040 IGF1RP08069 1367 aa18.14■□□□□ 0.49
PFDN5-201ENST00000243040 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
PFDN5-201ENST00000243040 RUSC2Q8N2Y8 1516 aa18.07■□□□□ 0.48
PFDN5-201ENST00000243040 SHROOM2Q13796 1616 aa18.06■□□□□ 0.48
PFDN5-201ENST00000243040 CARMIL1Q5VZK9 1371 aa18.03■□□□□ 0.48
PFDN5-201ENST00000243040 ARAP1Q96P48 1450 aa18■□□□□ 0.47
PFDN5-201ENST00000243040 RAPGEF2Q9Y4G8 1499 aa17.97■□□□□ 0.47
PFDN5-201ENST00000243040 KIAA0586Q9BVV6 1533 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms