RNA–Protein interactions for RNA: ENST00000241305.3

CPXM2-201, Transcript of carboxypeptidase X, M14 family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPXM2, Length 3,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPXM2-201ENST00000241305 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.78
CPXM2-201ENST00000241305 PELP1Q8IZL8 1130 aaKnown RBP24.17■■□□□ 1.46
CPXM2-201ENST00000241305 HRCP23327 699 aa24.09■■□□□ 1.45
CPXM2-201ENST00000241305 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
CPXM2-201ENST00000241305 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
CPXM2-201ENST00000241305 PPARGC1BQ86YN6 1023 aaKnown RBP23.75■■□□□ 1.39
CPXM2-201ENST00000241305 SUPT5HO00267 1087 aaKnown RBP23.66■■□□□ 1.38
CPXM2-201ENST00000241305 PCGF6Q9BYE7 350 aa23.5■■□□□ 1.35
CPXM2-201ENST00000241305 MYT1Q01538 1121 aa23.39■■□□□ 1.33
CPXM2-201ENST00000241305 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
CPXM2-201ENST00000241305 MYO15BQ96JP2 1530 aa22.69■■□□□ 1.22
CPXM2-201ENST00000241305 CHIC1Q5VXU3 224 aa22.48■■□□□ 1.19
CPXM2-201ENST00000241305 ACIN1Q9UKV3 1341 aaKnown RBP22.42■■□□□ 1.18
CPXM2-201ENST00000241305 ZEB1P37275 1124 aaPredicted RBP22.4■■□□□ 1.18
CPXM2-201ENST00000241305 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.18
CPXM2-201ENST00000241305 EHMT2Q96KQ7 1210 aa22.38■■□□□ 1.17
CPXM2-201ENST00000241305 GTF3C3Q9Y5Q9 886 aa22.38■■□□□ 1.17
CPXM2-201ENST00000241305 NEUROD1Q13562 356 aa22.38■■□□□ 1.17
CPXM2-201ENST00000241305 DCAF1Q9Y4B6 1507 aa22.25■■□□□ 1.15
CPXM2-201ENST00000241305 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
CPXM2-201ENST00000241305 CENPBP07199 599 aaPredicted RBP22.15■■□□□ 1.14
CPXM2-201ENST00000241305 FAM9AQ8IZU1 332 aaPredicted RBP22.1■■□□□ 1.13
CPXM2-201ENST00000241305 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
CPXM2-201ENST00000241305 TTBK1Q5TCY1 1321 aaPredicted RBP22.03■■□□□ 1.12
CPXM2-201ENST00000241305 ZCCHC6Q5VYS8 1495 aaKnown RBP21.95■■□□□ 1.1
CPXM2-201ENST00000241305 BCL11AQ9H165 835 aa21.94■■□□□ 1.1
CPXM2-201ENST00000241305 DIEXFQ68CQ4 756 aaKnown RBP21.78■■□□□ 1.08
CPXM2-201ENST00000241305 TRIM41Q8WV44 630 aa21.74■■□□□ 1.07
CPXM2-201ENST00000241305 YTHDC1Q96MU7 727 aaKnown RBP21.72■■□□□ 1.07
CPXM2-201ENST00000241305 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
CPXM2-201ENST00000241305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
CPXM2-201ENST00000241305 ANP32EQ9BTT0 268 aa21.5■■□□□ 1.03
CPXM2-201ENST00000241305 PRKCSHP14314 528 aaPredicted RBP21.49■■□□□ 1.03
CPXM2-201ENST00000241305 CSRNP3Q8WYN3 585 aa21.35■■□□□ 1.01
CPXM2-201ENST00000241305 ABCC9O60706 1549 aa21.28■■□□□ 1
CPXM2-201ENST00000241305 SCRIBQ14160 1630 aa21.21■□□□□ 0.99
CPXM2-201ENST00000241305 MIER1Q8N108 512 aa21.14■□□□□ 0.98
CPXM2-201ENST00000241305 ZNF316A6NFI3 1004 aaPredicted RBP21.13■□□□□ 0.97
CPXM2-201ENST00000241305 TSHZ2Q9NRE2 1034 aa21.13■□□□□ 0.97
CPXM2-201ENST00000241305 RANGAP1P46060 587 aaPredicted RBP21.1■□□□□ 0.97
CPXM2-201ENST00000241305 SUPT16HQ9Y5B9 1047 aaKnown RBP21.06■□□□□ 0.96
CPXM2-201ENST00000241305 ERICH6Q7L0X2 663 aa20.99■□□□□ 0.95
CPXM2-201ENST00000241305 UBTFP17480 764 aaKnown RBP20.98■□□□□ 0.95
CPXM2-201ENST00000241305 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
CPXM2-201ENST00000241305 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
CPXM2-201ENST00000241305 CLSPNQ9HAW4 1339 aa20.82■□□□□ 0.92
CPXM2-201ENST00000241305 BCANQ96GW7 911 aa20.78■□□□□ 0.92
CPXM2-201ENST00000241305 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
CPXM2-201ENST00000241305 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
CPXM2-201ENST00000241305 APLP2Q06481 763 aa20.69■□□□□ 0.9
CPXM2-201ENST00000241305 HNRNPUL2Q1KMD3 747 aaKnown RBP20.63■□□□□ 0.89
CPXM2-201ENST00000241305 RBM19Q9Y4C8 960 aaKnown RBP20.61■□□□□ 0.89
CPXM2-201ENST00000241305 ANO8Q9HCE9 1232 aaPredicted RBP20.57■□□□□ 0.88
CPXM2-201ENST00000241305 MROH2BQ7Z745 1585 aa20.5■□□□□ 0.87
CPXM2-201ENST00000241305 FKBP8Q14318 412 aa20.49■□□□□ 0.87
CPXM2-201ENST00000241305 MSH5O43196 834 aa20.44■□□□□ 0.86
CPXM2-201ENST00000241305 ITGAEP38570 1179 aa20.4■□□□□ 0.86
CPXM2-201ENST00000241305 DEKP35659 375 aaKnown RBP20.36■□□□□ 0.85
CPXM2-201ENST00000241305 WIZO95785 1651 aa20.34■□□□□ 0.85
CPXM2-201ENST00000241305 NEFLP07196 543 aa20.34■□□□□ 0.85
CPXM2-201ENST00000241305 NACADO15069 1562 aa20.31■□□□□ 0.84
CPXM2-201ENST00000241305 CCDC136Q96JN2 1154 aa20.29■□□□□ 0.84
CPXM2-201ENST00000241305 ATP1B4Q9UN42 357 aaPredicted RBP20.29■□□□□ 0.84
CPXM2-201ENST00000241305 SALL2Q9Y467 1007 aaPredicted RBP20.29■□□□□ 0.84
CPXM2-201ENST00000241305 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
CPXM2-201ENST00000241305 KCNH8Q96L42 1107 aa20.23■□□□□ 0.83
CPXM2-201ENST00000241305 SOGA1O94964 1423 aa20.22■□□□□ 0.83
CPXM2-201ENST00000241305 MYT1LQ9UL68 1186 aa20.21■□□□□ 0.83
CPXM2-201ENST00000241305 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
CPXM2-201ENST00000241305 CEP162Q5TB80 1403 aa20.18■□□□□ 0.82
CPXM2-201ENST00000241305 FANCIQ9NVI1 1328 aa20.11■□□□□ 0.81
CPXM2-201ENST00000241305 BAZ1AQ9NRL2 1556 aaPredicted RBP20.11■□□□□ 0.81
CPXM2-201ENST00000241305 NBR1Q14596 966 aa20.11■□□□□ 0.81
CPXM2-201ENST00000241305 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.09■□□□□ 0.81
CPXM2-201ENST00000241305 RTN4Q9NQC3 1192 aaKnown RBP20.07■□□□□ 0.8
CPXM2-201ENST00000241305 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
CPXM2-201ENST00000241305 WRNQ14191 1432 aaPredicted RBP eCLIP20.03■□□□□ 0.8
CPXM2-201ENST00000241305 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.8
CPXM2-201ENST00000241305 ERICH6BQ5W0A0 696 aa20.01■□□□□ 0.79
CPXM2-201ENST00000241305 UBE2Q2Q8WVN8 375 aa20■□□□□ 0.79
CPXM2-201ENST00000241305 TRIM52Q96A61 297 aa19.99■□□□□ 0.79
CPXM2-201ENST00000241305 TNIKQ9UKE5 1360 aa19.96■□□□□ 0.79
CPXM2-201ENST00000241305 IL27Q8NEV9 243 aa19.94■□□□□ 0.78
CPXM2-201ENST00000241305 IRX6P78412 446 aaPredicted RBP19.91■□□□□ 0.78
CPXM2-201ENST00000241305 CLIP1P30622 1438 aa19.91■□□□□ 0.78
CPXM2-201ENST00000241305 P3H3Q8IVL6 736 aa19.88■□□□□ 0.77
CPXM2-201ENST00000241305 GOLGA3Q08378 1498 aa19.88■□□□□ 0.77
CPXM2-201ENST00000241305 RTL5Q5HYW3 569 aaPredicted RBP19.87■□□□□ 0.77
CPXM2-201ENST00000241305 TOP2AP11388 1531 aaKnown RBP19.85■□□□□ 0.77
CPXM2-201ENST00000241305 EIF5BO60841 1220 aaKnown RBP19.83■□□□□ 0.77
CPXM2-201ENST00000241305 NOP58Q9Y2X3 529 aaKnown RBP19.83■□□□□ 0.76
CPXM2-201ENST00000241305 DDX10Q13206 875 aaKnown RBP19.82■□□□□ 0.76
CPXM2-201ENST00000241305 FAM50AQ14320 339 aaKnown RBP19.81■□□□□ 0.76
CPXM2-201ENST00000241305 SMARCA4P51532 1647 aa19.79■□□□□ 0.76
CPXM2-201ENST00000241305 EEA1Q15075 1411 aa19.78■□□□□ 0.76
CPXM2-201ENST00000241305 PAK3O75914 559 aaPredicted RBP19.76■□□□□ 0.75
CPXM2-201ENST00000241305 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
CPXM2-201ENST00000241305 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
CPXM2-201ENST00000241305 CEP164Q9UPV0 1460 aa19.7■□□□□ 0.74
CPXM2-201ENST00000241305 DHX57Q6P158 1386 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms