RNA–Protein interactions for RNA: ENST00000236826.7

MMP8-201, Transcript of matrix metallopeptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP8, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-201ENST00000236826 NISCHQ9Y2I1 1504 aa13.18□□□□□ -0.3
MMP8-201ENST00000236826 CHIC1Q5VXU3 224 aa11.97□□□□□ -0.49
MMP8-201ENST00000236826 CCDC180Q9P1Z9 1646 aa11.75□□□□□ -0.53
MMP8-201ENST00000236826 SLC24A1O60721 1099 aa11.62□□□□□ -0.55
MMP8-201ENST00000236826 AEBP2Q6ZN18 517 aaPredicted RBP11.34□□□□□ -0.59
MMP8-201ENST00000236826 EHMT2Q96KQ7 1210 aa11.3□□□□□ -0.6
MMP8-201ENST00000236826 ABCC9O60706 1549 aa11.14□□□□□ -0.63
MMP8-201ENST00000236826 MYO15BQ96JP2 1530 aa11.06□□□□□ -0.64
MMP8-201ENST00000236826 DCAF1Q9Y4B6 1507 aa11.03□□□□□ -0.64
MMP8-201ENST00000236826 ZCCHC6Q5VYS8 1495 aaKnown RBP11.02□□□□□ -0.65
MMP8-201ENST00000236826 NACADO15069 1562 aa10.99□□□□□ -0.65
MMP8-201ENST00000236826 RB1CC1Q8TDY2 1594 aa10.93□□□□□ -0.66
MMP8-201ENST00000236826 PLPPR3Q6T4P5 718 aa10.85□□□□□ -0.67
MMP8-201ENST00000236826 PHF23Q9BUL5 403 aaPredicted RBP10.82□□□□□ -0.68
MMP8-201ENST00000236826 RTN4Q9NQC3 1192 aaKnown RBP10.71□□□□□ -0.69
MMP8-201ENST00000236826 DCAF8L2P0C7V8 631 aa10.67□□□□□ -0.7
MMP8-201ENST00000236826 UNC13AQ9UPW8 1703 aa10.63□□□□□ -0.71
MMP8-201ENST00000236826 SHROOM4Q9ULL8 1493 aa10.63□□□□□ -0.71
MMP8-201ENST00000236826 BICRAQ9NZM4 1560 aa10.57□□□□□ -0.72
MMP8-201ENST00000236826 SCRIBQ14160 1630 aa10.55□□□□□ -0.72
MMP8-201ENST00000236826 CSRNP3Q8WYN3 585 aa10.48□□□□□ -0.73
MMP8-201ENST00000236826 KCNA4P22459 653 aa10.45□□□□□ -0.74
MMP8-201ENST00000236826 AMER1Q5JTC6 1135 aaPredicted RBP10.4□□□□□ -0.74
MMP8-201ENST00000236826 PABPN1Q86U42 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
MMP8-201ENST00000236826 NCBP3Q53F19 620 aaKnown RBP10.33□□□□□ -0.76
MMP8-201ENST00000236826 DAXXQ9UER7 740 aaPredicted RBP10.29□□□□□ -0.76
MMP8-201ENST00000236826 EIF4G1Q04637 1599 aaKnown RBP10.26□□□□□ -0.77
MMP8-201ENST00000236826 BAZ1AQ9NRL2 1556 aaPredicted RBP10.22□□□□□ -0.77
MMP8-201ENST00000236826 SMARCA4P51532 1647 aa10.19□□□□□ -0.78
MMP8-201ENST00000236826 PRKCSHP14314 528 aaPredicted RBP10.19□□□□□ -0.78
MMP8-201ENST00000236826 PEG3Q9GZU2 1588 aa10.18□□□□□ -0.78
MMP8-201ENST00000236826 CC2D2AQ9P2K1 1620 aa10.17□□□□□ -0.78
MMP8-201ENST00000236826 CECR2Q9BXF3 1484 aa10.16□□□□□ -0.78
MMP8-201ENST00000236826 SMARCA2P51531 1590 aa10.13□□□□□ -0.79
MMP8-201ENST00000236826 NCAPD3P42695 1498 aa10.11□□□□□ -0.79
MMP8-201ENST00000236826 MROH2BQ7Z745 1585 aa10.1□□□□□ -0.79
MMP8-201ENST00000236826 HMGXB3Q12766 1538 aa10.1□□□□□ -0.79
MMP8-201ENST00000236826 ATAD2BQ9ULI0 1458 aa10.09□□□□□ -0.79
MMP8-201ENST00000236826 DNAJC5BQ9UF47 199 aa10.08□□□□□ -0.8
MMP8-201ENST00000236826 RSF1Q96T23 1441 aaPredicted RBP10.05□□□□□ -0.8
MMP8-201ENST00000236826 SLC4A1APQ9BWU0 796 aaKnown RBP10.03□□□□□ -0.8
MMP8-201ENST00000236826 BAZ1BQ9UIG0 1483 aaKnown RBP9.99□□□□□ -0.81
MMP8-201ENST00000236826 WIZO95785 1651 aa9.98□□□□□ -0.81
MMP8-201ENST00000236826 TOP2AP11388 1531 aaKnown RBP9.97□□□□□ -0.81
MMP8-201ENST00000236826 TIMELESSQ9UNS1 1208 aa9.88□□□□□ -0.83
MMP8-201ENST00000236826 LAMC3Q9Y6N6 1575 aa9.83□□□□□ -0.84
MMP8-201ENST00000236826 TAOK2Q9UL54 1235 aa9.83□□□□□ -0.84
MMP8-201ENST00000236826 ADRA2BP18089 450 aa9.81□□□□□ -0.84
MMP8-201ENST00000236826 ARXQ96QS3 562 aa9.8□□□□□ -0.84
MMP8-201ENST00000236826 CCDC88BA6NC98 1476 aa9.8□□□□□ -0.84
MMP8-201ENST00000236826 SUPT5HO00267 1087 aaKnown RBP9.78□□□□□ -0.84
MMP8-201ENST00000236826 CFTRP13569 1480 aa9.77□□□□□ -0.84
MMP8-201ENST00000236826 CADPSQ9ULU8 1353 aa9.77□□□□□ -0.84
MMP8-201ENST00000236826 TULP1O00294 542 aaPredicted RBP9.76□□□□□ -0.85
MMP8-201ENST00000236826 PRDM2Q13029 1718 aa9.76□□□□□ -0.85
MMP8-201ENST00000236826 PDS5BQ9NTI5 1447 aa9.72□□□□□ -0.85
MMP8-201ENST00000236826 TPRNQ4KMQ1 711 aa9.7□□□□□ -0.86
MMP8-201ENST00000236826 BCANQ96GW7 911 aa9.7□□□□□ -0.86
MMP8-201ENST00000236826 ZBTB22O15209 634 aa9.69□□□□□ -0.86
MMP8-201ENST00000236826 NESP48681 1621 aa9.69□□□□□ -0.86
MMP8-201ENST00000236826 FANCD2Q9BXW9 1451 aa9.64□□□□□ -0.87
MMP8-201ENST00000236826 KIF21AQ7Z4S6 1674 aa9.64□□□□□ -0.87
MMP8-201ENST00000236826 CEP164Q9UPV0 1460 aa9.63□□□□□ -0.87
MMP8-201ENST00000236826 THOC2Q8NI27 1593 aaKnown RBP9.63□□□□□ -0.87
MMP8-201ENST00000236826 ERCC6Q03468 1493 aa9.62□□□□□ -0.87
MMP8-201ENST00000236826 MRC2Q9UBG0 1479 aa9.62□□□□□ -0.87
MMP8-201ENST00000236826 PLCB2Q00722 1185 aa9.62□□□□□ -0.87
MMP8-201ENST00000236826 ABCC8Q09428 1581 aa9.61□□□□□ -0.87
MMP8-201ENST00000236826 WDR62O43379 1518 aa9.61□□□□□ -0.87
MMP8-201ENST00000236826 CUX2O14529 1486 aa9.61□□□□□ -0.87
MMP8-201ENST00000236826 HAP1P54257 671 aaPredicted RBP9.57□□□□□ -0.88
MMP8-201ENST00000236826 DNMBPQ6XZF7 1577 aa9.55□□□□□ -0.88
MMP8-201ENST00000236826 URB2Q14146 1524 aaKnown RBP9.54□□□□□ -0.88
MMP8-201ENST00000236826 HOMEZQ8IX15 550 aa9.54□□□□□ -0.88
MMP8-201ENST00000236826 TOPBP1Q92547 1522 aa9.52□□□□□ -0.89
MMP8-201ENST00000236826 BIVM-ERCC5R4GMW8 1640 aa9.51□□□□□ -0.89
MMP8-201ENST00000236826 RANGAP1P46060 587 aaPredicted RBP9.5□□□□□ -0.89
MMP8-201ENST00000236826 WDR97A6NE52 1622 aa9.49□□□□□ -0.89
MMP8-201ENST00000236826 CUX1P39880 1505 aa9.48□□□□□ -0.89
MMP8-201ENST00000236826 TOP2BQ02880 1626 aa9.48□□□□□ -0.89
MMP8-201ENST00000236826 APLP2Q06481 763 aa9.47□□□□□ -0.89
MMP8-201ENST00000236826 IFT140Q96RY7 1462 aa9.46□□□□□ -0.89
MMP8-201ENST00000236826 WRNQ14191 1432 aaPredicted RBP eCLIP9.46□□□□□ -0.9
MMP8-201ENST00000236826 GTF3C3Q9Y5Q9 886 aa9.44□□□□□ -0.9
MMP8-201ENST00000236826 TARBP1Q13395 1621 aaKnown RBP9.43□□□□□ -0.9
MMP8-201ENST00000236826 POLA1P09884 1462 aaPredicted RBP9.43□□□□□ -0.9
MMP8-201ENST00000236826 SYNJ1O43426 1573 aa9.43□□□□□ -0.9
MMP8-201ENST00000236826 FKBP8Q14318 412 aa9.42□□□□□ -0.9
MMP8-201ENST00000236826 FGD5Q6ZNL6 1462 aa9.41□□□□□ -0.9
MMP8-201ENST00000236826 PODXL2Q9NZ53 605 aa9.4□□□□□ -0.9
MMP8-201ENST00000236826 ABCA10Q8WWZ4 1543 aa9.39□□□□□ -0.91
MMP8-201ENST00000236826 SOGA1O94964 1423 aa9.38□□□□□ -0.91
MMP8-201ENST00000236826 NPM3O75607 178 aaKnown RBP9.36□□□□□ -0.91
MMP8-201ENST00000236826 KLHL34Q8N239 644 aa9.36□□□□□ -0.91
MMP8-201ENST00000236826 PELP1Q8IZL8 1130 aaKnown RBP9.35□□□□□ -0.91
MMP8-201ENST00000236826 ABCA5Q8WWZ7 1642 aa9.35□□□□□ -0.91
MMP8-201ENST00000236826 EIF4G3O43432 1585 aaKnown RBP9.33□□□□□ -0.92
MMP8-201ENST00000236826 RAD54L2Q9Y4B4 1467 aa9.33□□□□□ -0.92
MMP8-201ENST00000236826 ERICH6Q7L0X2 663 aa9.32□□□□□ -0.92
MMP8-201ENST00000236826 ERICH3Q5RHP9 1530 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms