RNA–Protein interactions for RNA: ENST00000233699.8

POLE4-201, Transcript of DNA polymerase epsilon 4, accessory subunit, humanhuman

TSL 3

Gene POLE4, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE4-201ENST00000233699 NISCHQ9Y2I1 1504 aa28.42■■■□□ 2.14
POLE4-201ENST00000233699 ABCC9O60706 1549 aa25.8■■□□□ 1.72
POLE4-201ENST00000233699 CCDC180Q9P1Z9 1646 aa25.62■■□□□ 1.69
POLE4-201ENST00000233699 RB1CC1Q8TDY2 1594 aa24.46■■□□□ 1.51
POLE4-201ENST00000233699 DNAJC5BQ9UF47 199 aa24.34■■□□□ 1.49
POLE4-201ENST00000233699 NACADO15069 1562 aa24.22■■□□□ 1.47
POLE4-201ENST00000233699 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
POLE4-201ENST00000233699 UNC13AQ9UPW8 1703 aa24■■□□□ 1.43
POLE4-201ENST00000233699 PABPN1Q86U42 306 aaKnown RBP eCLIP23.97■■□□□ 1.43
POLE4-201ENST00000233699 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
POLE4-201ENST00000233699 BICRAQ9NZM4 1560 aa23.78■■□□□ 1.4
POLE4-201ENST00000233699 ZCCHC6Q5VYS8 1495 aaKnown RBP23.53■■□□□ 1.36
POLE4-201ENST00000233699 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
POLE4-201ENST00000233699 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
POLE4-201ENST00000233699 SHROOM4Q9ULL8 1493 aa23.36■■□□□ 1.33
POLE4-201ENST00000233699 CC2D2AQ9P2K1 1620 aa23.31■■□□□ 1.32
POLE4-201ENST00000233699 CECR2Q9BXF3 1484 aa23.24■■□□□ 1.31
POLE4-201ENST00000233699 EIF4G1Q04637 1599 aaKnown RBP23.19■■□□□ 1.3
POLE4-201ENST00000233699 DNAJC5Q9H3Z4 198 aa22.43■■□□□ 1.18
POLE4-201ENST00000233699 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
POLE4-201ENST00000233699 CUX2O14529 1486 aa22.28■■□□□ 1.16
POLE4-201ENST00000233699 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
POLE4-201ENST00000233699 ATAD2BQ9ULI0 1458 aa22.28■■□□□ 1.16
POLE4-201ENST00000233699 SMARCA4P51532 1647 aa22.25■■□□□ 1.15
POLE4-201ENST00000233699 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
POLE4-201ENST00000233699 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
POLE4-201ENST00000233699 NESP48681 1621 aa22.13■■□□□ 1.13
POLE4-201ENST00000233699 BAZ1AQ9NRL2 1556 aaPredicted RBP22.07■■□□□ 1.12
POLE4-201ENST00000233699 BAZ1BQ9UIG0 1483 aaKnown RBP22.06■■□□□ 1.12
POLE4-201ENST00000233699 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
POLE4-201ENST00000233699 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.11
POLE4-201ENST00000233699 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
POLE4-201ENST00000233699 LAMC3Q9Y6N6 1575 aa21.9■■□□□ 1.1
POLE4-201ENST00000233699 KIF21AQ7Z4S6 1674 aa21.88■■□□□ 1.09
POLE4-201ENST00000233699 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
POLE4-201ENST00000233699 WIZO95785 1651 aa21.69■■□□□ 1.06
POLE4-201ENST00000233699 CADPSQ9ULU8 1353 aa21.65■■□□□ 1.06
POLE4-201ENST00000233699 MRC2Q9UBG0 1479 aa21.61■■□□□ 1.05
POLE4-201ENST00000233699 WDR62O43379 1518 aa21.58■■□□□ 1.04
POLE4-201ENST00000233699 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
POLE4-201ENST00000233699 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.02
POLE4-201ENST00000233699 TRIM41Q8WV44 630 aa21.44■■□□□ 1.02
POLE4-201ENST00000233699 CFTRP13569 1480 aa21.39■■□□□ 1.01
POLE4-201ENST00000233699 RSF1Q96T23 1441 aaPredicted RBP21.37■■□□□ 1.01
POLE4-201ENST00000233699 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
POLE4-201ENST00000233699 URB2Q14146 1524 aaKnown RBP21.3■■□□□ 1
POLE4-201ENST00000233699 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
POLE4-201ENST00000233699 OSCARQ8IYS5 282 aa21.18■□□□□ 0.98
POLE4-201ENST00000233699 CCDC88BA6NC98 1476 aa21.11■□□□□ 0.97
POLE4-201ENST00000233699 ZNF608Q9ULD9 1512 aaPredicted RBP21.08■□□□□ 0.96
POLE4-201ENST00000233699 IFT140Q96RY7 1462 aa21.05■□□□□ 0.96
POLE4-201ENST00000233699 RIMBP3CA6NJZ7 1639 aa21.04■□□□□ 0.96
POLE4-201ENST00000233699 RIMBP3BA6NNM3 1639 aa21.04■□□□□ 0.96
POLE4-201ENST00000233699 RIMBP3Q9UFD9 1639 aa21.04■□□□□ 0.96
POLE4-201ENST00000233699 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
POLE4-201ENST00000233699 EIF4G3O43432 1585 aaKnown RBP20.97■□□□□ 0.95
POLE4-201ENST00000233699 DNMBPQ6XZF7 1577 aa20.94■□□□□ 0.94
POLE4-201ENST00000233699 ARHGEF11O15085 1522 aa20.92■□□□□ 0.94
POLE4-201ENST00000233699 ABCC8Q09428 1581 aa20.9■□□□□ 0.94
POLE4-201ENST00000233699 CHD1O14646 1710 aa20.89■□□□□ 0.93
POLE4-201ENST00000233699 TARBP1Q13395 1621 aaKnown RBP20.88■□□□□ 0.93
POLE4-201ENST00000233699 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.932e-7■■■■■ 29
POLE4-201ENST00000233699 POLA1P09884 1462 aaPredicted RBP20.8■□□□□ 0.92
POLE4-201ENST00000233699 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
POLE4-201ENST00000233699 CYB5RLQ6IPT4 315 aa20.74■□□□□ 0.91
POLE4-201ENST00000233699 FBLN2P98095 1184 aa20.73■□□□□ 0.91
POLE4-201ENST00000233699 ARAP1Q96P48 1450 aa20.7■□□□□ 0.9
POLE4-201ENST00000233699 TDRD9Q8NDG6 1382 aaKnown RBP20.67■□□□□ 0.9
POLE4-201ENST00000233699 SOGA1O94964 1423 aa20.67■□□□□ 0.9
POLE4-201ENST00000233699 FGD5Q6ZNL6 1462 aa20.65■□□□□ 0.9
POLE4-201ENST00000233699 SNAPC4Q5SXM2 1469 aa20.64■□□□□ 0.89
POLE4-201ENST00000233699 CUX1P39880 1505 aa20.62■□□□□ 0.89
POLE4-201ENST00000233699 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
POLE4-201ENST00000233699 CLASP1Q7Z460 1538 aa20.58■□□□□ 0.89
POLE4-201ENST00000233699 TRHP20396 242 aaPredicted RBP20.57■□□□□ 0.88
POLE4-201ENST00000233699 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
POLE4-201ENST00000233699 MAGI1Q96QZ7 1491 aaPredicted RBP20.54■□□□□ 0.88
POLE4-201ENST00000233699 PBRM1Q86U86 1689 aa20.52■□□□□ 0.88
POLE4-201ENST00000233699 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
POLE4-201ENST00000233699 CHMP7Q8WUX9 453 aaPredicted RBP20.51■□□□□ 0.87
POLE4-201ENST00000233699 SYNJ2O15056 1496 aa20.48■□□□□ 0.87
POLE4-201ENST00000233699 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
POLE4-201ENST00000233699 ABCA5Q8WWZ7 1642 aa20.42■□□□□ 0.86
POLE4-201ENST00000233699 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
POLE4-201ENST00000233699 SUPT5HO00267 1087 aaKnown RBP20.3■□□□□ 0.84
POLE4-201ENST00000233699 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
POLE4-201ENST00000233699 ADAMTS12P58397 1594 aa20.28■□□□□ 0.84
POLE4-201ENST00000233699 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
POLE4-201ENST00000233699 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
POLE4-201ENST00000233699 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
POLE4-201ENST00000233699 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
POLE4-201ENST00000233699 TOP2BQ02880 1626 aa20.23■□□□□ 0.83
POLE4-201ENST00000233699 NUP160Q12769 1436 aa20.2■□□□□ 0.82
POLE4-201ENST00000233699 SHROOM2Q13796 1616 aa20.17■□□□□ 0.82
POLE4-201ENST00000233699 FHAD1B1AJZ9 1412 aa20.15■□□□□ 0.82
POLE4-201ENST00000233699 ERICH3Q5RHP9 1530 aa20.12■□□□□ 0.81
POLE4-201ENST00000233699 AEBP2Q6ZN18 517 aaPredicted RBP20.09■□□□□ 0.81
POLE4-201ENST00000233699 KIF13AQ9H1H9 1805 aa20.04■□□□□ 0.8
POLE4-201ENST00000233699 PRG4Q92954 1404 aaPredicted RBP20.02■□□□□ 0.8
POLE4-201ENST00000233699 RUSC2Q8N2Y8 1516 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms