RNA–Protein interactions for RNA: ENST00000228955.11

GTF2H3-201, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2 BASIC

Gene GTF2H3, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-201ENST00000228955 NISCHQ9Y2I1 1504 aa16.76■□□□□ 0.27
GTF2H3-201ENST00000228955 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
GTF2H3-201ENST00000228955 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
GTF2H3-201ENST00000228955 ABCC9O60706 1549 aa15.1■□□□□ 0.01
GTF2H3-201ENST00000228955 CCDC180Q9P1Z9 1646 aa14.86□□□□□ -0.03
GTF2H3-201ENST00000228955 DCAF8L2P0C7V8 631 aa14.52□□□□□ -0.08
GTF2H3-201ENST00000228955 POTEDQ86YR6 584 aa14.45□□□□□ -0.1
GTF2H3-201ENST00000228955 SENP3Q9H4L4 574 aaPredicted RBP14.4□□□□□ -0.1
GTF2H3-201ENST00000228955 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
GTF2H3-201ENST00000228955 PABPN1Q86U42 306 aaKnown RBP eCLIP14.18□□□□□ -0.14
GTF2H3-201ENST00000228955 DNAJC5BQ9UF47 199 aa14.12□□□□□ -0.15
GTF2H3-201ENST00000228955 PHF23Q9BUL5 403 aaPredicted RBP14.09□□□□□ -0.15
GTF2H3-201ENST00000228955 NACADO15069 1562 aa14.07□□□□□ -0.16
GTF2H3-201ENST00000228955 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
GTF2H3-201ENST00000228955 ZCCHC6Q5VYS8 1495 aaKnown RBP13.88□□□□□ -0.19
GTF2H3-201ENST00000228955 SCRIBQ14160 1630 aa13.83□□□□□ -0.2
GTF2H3-201ENST00000228955 BICRAQ9NZM4 1560 aa13.82□□□□□ -0.2
GTF2H3-201ENST00000228955 MYO15BQ96JP2 1530 aa13.75□□□□□ -0.21
GTF2H3-201ENST00000228955 DCAF1Q9Y4B6 1507 aa13.67□□□□□ -0.22
GTF2H3-201ENST00000228955 CC2D2AQ9P2K1 1620 aa13.53□□□□□ -0.24
GTF2H3-201ENST00000228955 CECR2Q9BXF3 1484 aa13.5□□□□□ -0.25
GTF2H3-201ENST00000228955 SHROOM4Q9ULL8 1493 aa13.49□□□□□ -0.25
GTF2H3-201ENST00000228955 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
GTF2H3-201ENST00000228955 FOXD1Q16676 465 aa13.45□□□□□ -0.26
GTF2H3-201ENST00000228955 ATAD2BQ9ULI0 1458 aa13.07□□□□□ -0.32
GTF2H3-201ENST00000228955 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
GTF2H3-201ENST00000228955 NCAPD3P42695 1498 aa13.01□□□□□ -0.33
GTF2H3-201ENST00000228955 MROH2BQ7Z745 1585 aa13.01□□□□□ -0.33
GTF2H3-201ENST00000228955 NESP48681 1621 aa13□□□□□ -0.33
GTF2H3-201ENST00000228955 ERCC6Q03468 1493 aa12.99□□□□□ -0.33
GTF2H3-201ENST00000228955 BAZ1BQ9UIG0 1483 aaKnown RBP12.98□□□□□ -0.33
GTF2H3-201ENST00000228955 BAZ1AQ9NRL2 1556 aaPredicted RBP12.97□□□□□ -0.33
GTF2H3-201ENST00000228955 SMARCA2P51531 1590 aa12.97□□□□□ -0.33
GTF2H3-201ENST00000228955 WIZO95785 1651 aa12.89□□□□□ -0.35
GTF2H3-201ENST00000228955 PLPPR3Q6T4P5 718 aa12.89□□□□□ -0.35
GTF2H3-201ENST00000228955 HMGXB3Q12766 1538 aa12.89□□□□□ -0.35
GTF2H3-201ENST00000228955 MSH5O43196 834 aa12.87□□□□□ -0.35
GTF2H3-201ENST00000228955 PEG3Q9GZU2 1588 aa12.78□□□□□ -0.36
GTF2H3-201ENST00000228955 DNAJC5Q9H3Z4 198 aa12.76□□□□□ -0.37
GTF2H3-201ENST00000228955 RSF1Q96T23 1441 aaPredicted RBP12.75□□□□□ -0.37
GTF2H3-201ENST00000228955 KIF21AQ7Z4S6 1674 aa12.75□□□□□ -0.37
GTF2H3-201ENST00000228955 CUX2O14529 1486 aa12.74□□□□□ -0.37
GTF2H3-201ENST00000228955 CADPSQ9ULU8 1353 aa12.7□□□□□ -0.38
GTF2H3-201ENST00000228955 LAMC3Q9Y6N6 1575 aa12.69□□□□□ -0.38
GTF2H3-201ENST00000228955 PDS5BQ9NTI5 1447 aa12.68□□□□□ -0.38
GTF2H3-201ENST00000228955 THOC2Q8NI27 1593 aaKnown RBP12.67□□□□□ -0.38
GTF2H3-201ENST00000228955 TOP2AP11388 1531 aaKnown RBP12.61□□□□□ -0.39
GTF2H3-201ENST00000228955 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
GTF2H3-201ENST00000228955 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.4
GTF2H3-201ENST00000228955 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
GTF2H3-201ENST00000228955 CCDC88BA6NC98 1476 aa12.56□□□□□ -0.4
GTF2H3-201ENST00000228955 SUPT5HO00267 1087 aaKnown RBP12.56□□□□□ -0.4
GTF2H3-201ENST00000228955 CFTRP13569 1480 aa12.53□□□□□ -0.4
GTF2H3-201ENST00000228955 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
GTF2H3-201ENST00000228955 WDR62O43379 1518 aa12.5□□□□□ -0.41
GTF2H3-201ENST00000228955 URB2Q14146 1524 aaKnown RBP12.5□□□□□ -0.41
GTF2H3-201ENST00000228955 PIAS4Q8N2W9 510 aaPredicted RBP12.46□□□□□ -0.42
GTF2H3-201ENST00000228955 ADRA2BP18089 450 aa12.44□□□□□ -0.42
GTF2H3-201ENST00000228955 PPP6R1Q9UPN7 881 aa12.44□□□□□ -0.42
GTF2H3-201ENST00000228955 ZNF608Q9ULD9 1512 aaPredicted RBP12.39□□□□□ -0.43
GTF2H3-201ENST00000228955 FBLN2P98095 1184 aa12.36□□□□□ -0.43
GTF2H3-201ENST00000228955 TOPBP1Q92547 1522 aa12.35□□□□□ -0.43
GTF2H3-201ENST00000228955 PRDM2Q13029 1718 aa12.35□□□□□ -0.43
GTF2H3-201ENST00000228955 OSCARQ8IYS5 282 aa12.34□□□□□ -0.43
GTF2H3-201ENST00000228955 AQRO60306 1485 aaKnown RBP eCLIP12.31□□□□□ -0.443e-6■■■□□ 15.2
GTF2H3-201ENST00000228955 RAD54L2Q9Y4B4 1467 aa12.31□□□□□ -0.44
GTF2H3-201ENST00000228955 IFT140Q96RY7 1462 aa12.28□□□□□ -0.44
GTF2H3-201ENST00000228955 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.44
GTF2H3-201ENST00000228955 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
GTF2H3-201ENST00000228955 EIF4G3O43432 1585 aaKnown RBP12.23□□□□□ -0.45
GTF2H3-201ENST00000228955 POLA1P09884 1462 aaPredicted RBP12.23□□□□□ -0.45
GTF2H3-201ENST00000228955 SOGA1O94964 1423 aa12.23□□□□□ -0.45
GTF2H3-201ENST00000228955 FGD5Q6ZNL6 1462 aa12.2□□□□□ -0.46
GTF2H3-201ENST00000228955 CUX1P39880 1505 aa12.2□□□□□ -0.46
GTF2H3-201ENST00000228955 ABCC8Q09428 1581 aa12.2□□□□□ -0.46
GTF2H3-201ENST00000228955 TARBP1Q13395 1621 aaKnown RBP12.18□□□□□ -0.46
GTF2H3-201ENST00000228955 CYB5RLQ6IPT4 315 aa12.18□□□□□ -0.46
GTF2H3-201ENST00000228955 CHD1O14646 1710 aa12.16□□□□□ -0.46
GTF2H3-201ENST00000228955 CHMP7Q8WUX9 453 aaPredicted RBP12.14□□□□□ -0.47
GTF2H3-201ENST00000228955 RIMBP3CA6NJZ7 1639 aa12.14□□□□□ -0.47
GTF2H3-201ENST00000228955 RIMBP3BA6NNM3 1639 aa12.14□□□□□ -0.47
GTF2H3-201ENST00000228955 RIMBP3Q9UFD9 1639 aa12.14□□□□□ -0.47
GTF2H3-201ENST00000228955 SNAPC4Q5SXM2 1469 aa12.13□□□□□ -0.47
GTF2H3-201ENST00000228955 ARHGEF11O15085 1522 aa12.09□□□□□ -0.47
GTF2H3-201ENST00000228955 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
GTF2H3-201ENST00000228955 GAPVD1Q14C86 1478 aa12.04□□□□□ -0.48
GTF2H3-201ENST00000228955 GRIN2BQ13224 1484 aa12.04□□□□□ -0.48
GTF2H3-201ENST00000228955 SYNJ1O43426 1573 aa12.04□□□□□ -0.48
GTF2H3-201ENST00000228955 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
GTF2H3-201ENST00000228955 PBRM1Q86U86 1689 aa12.01□□□□□ -0.49
GTF2H3-201ENST00000228955 ARAP1Q96P48 1450 aa12□□□□□ -0.49
GTF2H3-201ENST00000228955 WDR97A6NE52 1622 aa12□□□□□ -0.49
GTF2H3-201ENST00000228955 ABCA10Q8WWZ4 1543 aa11.98□□□□□ -0.49
GTF2H3-201ENST00000228955 SYNJ2O15056 1496 aa11.97□□□□□ -0.49
GTF2H3-201ENST00000228955 MAGI1Q96QZ7 1491 aaPredicted RBP11.97□□□□□ -0.49
GTF2H3-201ENST00000228955 TTBK1Q5TCY1 1321 aaPredicted RBP11.95□□□□□ -0.5
GTF2H3-201ENST00000228955 TOP2BQ02880 1626 aa11.95□□□□□ -0.5
GTF2H3-201ENST00000228955 ABCA5Q8WWZ7 1642 aa11.95□□□□□ -0.5
GTF2H3-201ENST00000228955 BIVM-ERCC5R4GMW8 1640 aa11.93□□□□□ -0.5
GTF2H3-201ENST00000228955 CLASP1Q7Z460 1538 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 607.2 ms