RNA–Protein interactions for RNA: ENST00000216259.7

PMM1-201, Transcript of phosphomannomutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMM1, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-201ENST00000216259 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
PMM1-201ENST00000216259 CCDC180Q9P1Z9 1646 aa28.61■■■□□ 2.17
PMM1-201ENST00000216259 ABCC9O60706 1549 aa27.95■■■□□ 2.06
PMM1-201ENST00000216259 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
PMM1-201ENST00000216259 NACADO15069 1562 aa26.91■■□□□ 1.9
PMM1-201ENST00000216259 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
PMM1-201ENST00000216259 ZCCHC6Q5VYS8 1495 aaKnown RBP26.77■■□□□ 1.88
PMM1-201ENST00000216259 DCAF8L2P0C7V8 631 aa26.7■■□□□ 1.86
PMM1-201ENST00000216259 DCAF1Q9Y4B6 1507 aa26.66■■□□□ 1.86
PMM1-201ENST00000216259 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
PMM1-201ENST00000216259 BICRAQ9NZM4 1560 aa26.17■■□□□ 1.78
PMM1-201ENST00000216259 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.77
PMM1-201ENST00000216259 SCRIBQ14160 1630 aa26.01■■□□□ 1.75
PMM1-201ENST00000216259 DNAJC5BQ9UF47 199 aa25.98■■□□□ 1.75
PMM1-201ENST00000216259 SHROOM4Q9ULL8 1493 aa25.9■■□□□ 1.74
PMM1-201ENST00000216259 EIF4G1Q04637 1599 aaKnown RBP25.43■■□□□ 1.66
PMM1-201ENST00000216259 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
PMM1-201ENST00000216259 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
PMM1-201ENST00000216259 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
PMM1-201ENST00000216259 BAZ1AQ9NRL2 1556 aaPredicted RBP24.9■■□□□ 1.58
PMM1-201ENST00000216259 NCAPD3P42695 1498 aa24.85■■□□□ 1.57
PMM1-201ENST00000216259 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.56
PMM1-201ENST00000216259 SMARCA2P51531 1590 aa24.78■■□□□ 1.56
PMM1-201ENST00000216259 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
PMM1-201ENST00000216259 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
PMM1-201ENST00000216259 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
PMM1-201ENST00000216259 BAZ1BQ9UIG0 1483 aaKnown RBP24.57■■□□□ 1.52
PMM1-201ENST00000216259 WIZO95785 1651 aa24.48■■□□□ 1.51
PMM1-201ENST00000216259 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
PMM1-201ENST00000216259 TOP2AP11388 1531 aaKnown RBP24.22■■□□□ 1.47
PMM1-201ENST00000216259 NESP48681 1621 aa24.21■■□□□ 1.47
PMM1-201ENST00000216259 LAMC3Q9Y6N6 1575 aa24.17■■□□□ 1.46
PMM1-201ENST00000216259 CADPSQ9ULU8 1353 aa24.09■■□□□ 1.45
PMM1-201ENST00000216259 ERCC6Q03468 1493 aa24.06■■□□□ 1.44
PMM1-201ENST00000216259 PDS5BQ9NTI5 1447 aa23.98■■□□□ 1.43
PMM1-201ENST00000216259 CUX2O14529 1486 aa23.96■■□□□ 1.43
PMM1-201ENST00000216259 CFTRP13569 1480 aa23.96■■□□□ 1.43
PMM1-201ENST00000216259 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
PMM1-201ENST00000216259 KIF21AQ7Z4S6 1674 aa23.92■■□□□ 1.42
PMM1-201ENST00000216259 THOC2Q8NI27 1593 aaKnown RBP23.89■■□□□ 1.41
PMM1-201ENST00000216259 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
PMM1-201ENST00000216259 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
PMM1-201ENST00000216259 MRC2Q9UBG0 1479 aa23.74■■□□□ 1.39
PMM1-201ENST00000216259 CEP164Q9UPV0 1460 aa23.74■■□□□ 1.39
PMM1-201ENST00000216259 WDR62O43379 1518 aa23.69■■□□□ 1.38
PMM1-201ENST00000216259 SUPT5HO00267 1087 aaKnown RBP23.68■■□□□ 1.38
PMM1-201ENST00000216259 DNAJC5Q9H3Z4 198 aa23.62■■□□□ 1.37
PMM1-201ENST00000216259 URB2Q14146 1524 aaKnown RBP23.58■■□□□ 1.36
PMM1-201ENST00000216259 ABCC8Q09428 1581 aa23.43■■□□□ 1.34
PMM1-201ENST00000216259 TOPBP1Q92547 1522 aa23.42■■□□□ 1.34
PMM1-201ENST00000216259 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
PMM1-201ENST00000216259 IFT140Q96RY7 1462 aa23.28■■□□□ 1.32
PMM1-201ENST00000216259 CUX1P39880 1505 aa23.23■■□□□ 1.31
PMM1-201ENST00000216259 POLA1P09884 1462 aaPredicted RBP23.21■■□□□ 1.31
PMM1-201ENST00000216259 TARBP1Q13395 1621 aaKnown RBP23.2■■□□□ 1.3
PMM1-201ENST00000216259 ZNF608Q9ULD9 1512 aaPredicted RBP23.18■■□□□ 1.3
PMM1-201ENST00000216259 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
PMM1-201ENST00000216259 SOGA1O94964 1423 aa23.1■■□□□ 1.29
PMM1-201ENST00000216259 RAD54L2Q9Y4B4 1467 aa23.09■■□□□ 1.29
PMM1-201ENST00000216259 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
PMM1-201ENST00000216259 WRNQ14191 1432 aaPredicted RBP eCLIP23.03■■□□□ 1.289e-6■■■■■ 50.1
PMM1-201ENST00000216259 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
PMM1-201ENST00000216259 BIVM-ERCC5R4GMW8 1640 aa23.03■■□□□ 1.28
PMM1-201ENST00000216259 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
PMM1-201ENST00000216259 AQRO60306 1485 aaKnown RBP eCLIP23.02■■□□□ 1.281e-7■■■■■ 37.4
PMM1-201ENST00000216259 SYNJ1O43426 1573 aa22.99■■□□□ 1.27
PMM1-201ENST00000216259 TDRD9Q8NDG6 1382 aaKnown RBP22.96■■□□□ 1.27
PMM1-201ENST00000216259 ABCA10Q8WWZ4 1543 aa22.95■■□□□ 1.26
PMM1-201ENST00000216259 OSCARQ8IYS5 282 aa22.9■■□□□ 1.26
PMM1-201ENST00000216259 ABCA5Q8WWZ7 1642 aa22.85■■□□□ 1.25
PMM1-201ENST00000216259 GRIN2BQ13224 1484 aa22.85■■□□□ 1.25
PMM1-201ENST00000216259 GAPVD1Q14C86 1478 aa22.84■■□□□ 1.25
PMM1-201ENST00000216259 MAGI1Q96QZ7 1491 aaPredicted RBP22.8■■□□□ 1.24
PMM1-201ENST00000216259 SNAPC4Q5SXM2 1469 aa22.79■■□□□ 1.24
PMM1-201ENST00000216259 PBRM1Q86U86 1689 aa22.79■■□□□ 1.24
PMM1-201ENST00000216259 CHD1O14646 1710 aa22.79■■□□□ 1.24
PMM1-201ENST00000216259 SYNJ2O15056 1496 aa22.71■■□□□ 1.23
PMM1-201ENST00000216259 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
PMM1-201ENST00000216259 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
PMM1-201ENST00000216259 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
PMM1-201ENST00000216259 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
PMM1-201ENST00000216259 ERICH3Q5RHP9 1530 aa22.67■■□□□ 1.22
PMM1-201ENST00000216259 FBLN2P98095 1184 aa22.66■■□□□ 1.22
PMM1-201ENST00000216259 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
PMM1-201ENST00000216259 ADAMTS12P58397 1594 aa22.61■■□□□ 1.21
PMM1-201ENST00000216259 FHAD1B1AJZ9 1412 aa22.58■■□□□ 1.21
PMM1-201ENST00000216259 ARHGEF11O15085 1522 aa22.58■■□□□ 1.21
PMM1-201ENST00000216259 CLASP1Q7Z460 1538 aa22.58■■□□□ 1.21
PMM1-201ENST00000216259 GRIN2AQ12879 1464 aa22.54■■□□□ 1.2
PMM1-201ENST00000216259 KIF27Q86VH2 1401 aa22.54■■□□□ 1.2
PMM1-201ENST00000216259 IGF1RP08069 1367 aa22.52■■□□□ 1.2
PMM1-201ENST00000216259 NUP160Q12769 1436 aa22.49■■□□□ 1.19
PMM1-201ENST00000216259 CEP170Q5SW79 1584 aa22.45■■□□□ 1.18
PMM1-201ENST00000216259 CUL7Q14999 1698 aa22.42■■□□□ 1.18
PMM1-201ENST00000216259 ARAP1Q96P48 1450 aa22.39■■□□□ 1.17
PMM1-201ENST00000216259 RUSC2Q8N2Y8 1516 aa22.35■■□□□ 1.17
PMM1-201ENST00000216259 CARMIL1Q5VZK9 1371 aa22.35■■□□□ 1.17
PMM1-201ENST00000216259 SHROOM2Q13796 1616 aa22.35■■□□□ 1.17
PMM1-201ENST00000216259 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
PMM1-201ENST00000216259 KIAA0586Q9BVV6 1533 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms