RNA–Protein interactions for RNA: ENST00000011691.5

SS18L2-201, Transcript of SS18 like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L2, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2-201ENST00000011691 NISCHQ9Y2I1 1504 aa38.9■■■■□ 3.82
SS18L2-201ENST00000011691 CCDC180Q9P1Z9 1646 aa34.92■■■■□ 3.18
SS18L2-201ENST00000011691 ABCC9O60706 1549 aa34.81■■■■□ 3.16
SS18L2-201ENST00000011691 RB1CC1Q8TDY2 1594 aa33.15■■■□□ 2.9
SS18L2-201ENST00000011691 NACADO15069 1562 aa32.92■■■□□ 2.86
SS18L2-201ENST00000011691 AEBP2Q6ZN18 517 aaPredicted RBP32.86■■■□□ 2.85
SS18L2-201ENST00000011691 DCAF8L2P0C7V8 631 aa32.84■■■□□ 2.85
SS18L2-201ENST00000011691 UNC13AQ9UPW8 1703 aa32.57■■■□□ 2.8
SS18L2-201ENST00000011691 DNAJC5BQ9UF47 199 aa32.48■■■□□ 2.79
SS18L2-201ENST00000011691 MYO15BQ96JP2 1530 aa32.41■■■□□ 2.78
SS18L2-201ENST00000011691 PABPN1Q86U42 306 aaKnown RBP eCLIP32.4■■■□□ 2.78
SS18L2-201ENST00000011691 ZCCHC6Q5VYS8 1495 aaKnown RBP32.27■■■□□ 2.76
SS18L2-201ENST00000011691 BICRAQ9NZM4 1560 aa32.2■■■□□ 2.75
SS18L2-201ENST00000011691 DCAF1Q9Y4B6 1507 aa32.08■■■□□ 2.73
SS18L2-201ENST00000011691 SCRIBQ14160 1630 aa31.89■■■□□ 2.7
SS18L2-201ENST00000011691 CHIC1Q5VXU3 224 aa31.72■■■□□ 2.67
SS18L2-201ENST00000011691 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
SS18L2-201ENST00000011691 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
SS18L2-201ENST00000011691 EIF4G1Q04637 1599 aaKnown RBP31.39■■■□□ 2.62
SS18L2-201ENST00000011691 CECR2Q9BXF3 1484 aa31.3■■■□□ 2.6
SS18L2-201ENST00000011691 SMARCA4P51532 1647 aa30.38■■■□□ 2.45
SS18L2-201ENST00000011691 NCAPD3P42695 1498 aa30.34■■■□□ 2.45
SS18L2-201ENST00000011691 ATAD2BQ9ULI0 1458 aa30.31■■■□□ 2.44
SS18L2-201ENST00000011691 SMARCA2P51531 1590 aa30.24■■■□□ 2.43
SS18L2-201ENST00000011691 BAZ1AQ9NRL2 1556 aaPredicted RBP30.2■■■□□ 2.42
SS18L2-201ENST00000011691 HMGXB3Q12766 1538 aa30.18■■■□□ 2.42
SS18L2-201ENST00000011691 BAZ1BQ9UIG0 1483 aaKnown RBP30.06■■■□□ 2.4
SS18L2-201ENST00000011691 ERCC6Q03468 1493 aa30.03■■■□□ 2.4
SS18L2-201ENST00000011691 MROH2BQ7Z745 1585 aa30.02■■■□□ 2.4
SS18L2-201ENST00000011691 PEG3Q9GZU2 1588 aa30.01■■■□□ 2.39
SS18L2-201ENST00000011691 NESP48681 1621 aa29.95■■■□□ 2.38
SS18L2-201ENST00000011691 CUX2O14529 1486 aa29.87■■■□□ 2.37
SS18L2-201ENST00000011691 WIZO95785 1651 aa29.74■■■□□ 2.35
SS18L2-201ENST00000011691 LAMC3Q9Y6N6 1575 aa29.71■■■□□ 2.35
SS18L2-201ENST00000011691 DNAJC5Q9H3Z4 198 aa29.68■■■□□ 2.34
SS18L2-201ENST00000011691 KIF21AQ7Z4S6 1674 aa29.65■■■□□ 2.34
SS18L2-201ENST00000011691 THOC2Q8NI27 1593 aaKnown RBP29.62■■■□□ 2.33
SS18L2-201ENST00000011691 PDS5BQ9NTI5 1447 aa29.48■■■□□ 2.31
SS18L2-201ENST00000011691 CADPSQ9ULU8 1353 aa29.43■■■□□ 2.3
SS18L2-201ENST00000011691 RSF1Q96T23 1441 aaPredicted RBP29.39■■■□□ 2.3
SS18L2-201ENST00000011691 TOP2AP11388 1531 aaKnown RBP29.29■■■□□ 2.28
SS18L2-201ENST00000011691 MRC2Q9UBG0 1479 aa29.26■■■□□ 2.27
SS18L2-201ENST00000011691 WDR62O43379 1518 aa29.2■■■□□ 2.26
SS18L2-201ENST00000011691 CEP164Q9UPV0 1460 aa29.18■■■□□ 2.26
SS18L2-201ENST00000011691 FANCD2Q9BXW9 1451 aa29.16■■■□□ 2.26
SS18L2-201ENST00000011691 CFTRP13569 1480 aa29.14■■■□□ 2.26
SS18L2-201ENST00000011691 PRDM2Q13029 1718 aa29.04■■■□□ 2.24
SS18L2-201ENST00000011691 CCDC88BA6NC98 1476 aa28.94■■■□□ 2.22
SS18L2-201ENST00000011691 URB2Q14146 1524 aaKnown RBP28.93■■■□□ 2.22
SS18L2-201ENST00000011691 TOPBP1Q92547 1522 aa28.63■■■□□ 2.17
SS18L2-201ENST00000011691 IFT140Q96RY7 1462 aa28.56■■■□□ 2.16
SS18L2-201ENST00000011691 ZNF608Q9ULD9 1512 aaPredicted RBP28.56■■■□□ 2.16
SS18L2-201ENST00000011691 DNMBPQ6XZF7 1577 aa28.55■■■□□ 2.16
SS18L2-201ENST00000011691 TRIM41Q8WV44 630 aa28.55■■■□□ 2.16
SS18L2-201ENST00000011691 ABCC8Q09428 1581 aa28.5■■■□□ 2.15
SS18L2-201ENST00000011691 OSCARQ8IYS5 282 aa28.5■■■□□ 2.15
SS18L2-201ENST00000011691 EIF4G3O43432 1585 aaKnown RBP28.46■■■□□ 2.15
SS18L2-201ENST00000011691 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
SS18L2-201ENST00000011691 POLA1P09884 1462 aaPredicted RBP28.34■■■□□ 2.13
SS18L2-201ENST00000011691 AQRO60306 1485 aaKnown RBP eCLIP28.3■■■□□ 2.12
SS18L2-201ENST00000011691 CHD1O14646 1710 aa28.29■■■□□ 2.12
SS18L2-201ENST00000011691 RAD54L2Q9Y4B4 1467 aa28.27■■■□□ 2.12
SS18L2-201ENST00000011691 SUPT5HO00267 1087 aaKnown RBP28.26■■■□□ 2.11
SS18L2-201ENST00000011691 RIMBP3CA6NJZ7 1639 aa28.25■■■□□ 2.11
SS18L2-201ENST00000011691 RIMBP3BA6NNM3 1639 aa28.25■■■□□ 2.11
SS18L2-201ENST00000011691 RIMBP3Q9UFD9 1639 aa28.25■■■□□ 2.11
SS18L2-201ENST00000011691 CUX1P39880 1505 aa28.2■■■□□ 2.1
SS18L2-201ENST00000011691 FGD5Q6ZNL6 1462 aa28.2■■■□□ 2.1
SS18L2-201ENST00000011691 SOGA1O94964 1423 aa28.19■■■□□ 2.1
SS18L2-201ENST00000011691 TDRD9Q8NDG6 1382 aaKnown RBP28.14■■■□□ 2.1
SS18L2-201ENST00000011691 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
SS18L2-201ENST00000011691 FBLN2P98095 1184 aa28.12■■■□□ 2.09
SS18L2-201ENST00000011691 WDR97A6NE52 1622 aa28.06■■■□□ 2.08
SS18L2-201ENST00000011691 SNAPC4Q5SXM2 1469 aa28.03■■■□□ 2.08
SS18L2-201ENST00000011691 PBRM1Q86U86 1689 aa27.98■■■□□ 2.07
SS18L2-201ENST00000011691 GRIN2BQ13224 1484 aa27.93■■■□□ 2.06
SS18L2-201ENST00000011691 SENP3Q9H4L4 574 aaPredicted RBP27.92■■■□□ 2.06
SS18L2-201ENST00000011691 MAGI1Q96QZ7 1491 aaPredicted RBP27.91■■■□□ 2.06
SS18L2-201ENST00000011691 CYB5RLQ6IPT4 315 aa27.89■■■□□ 2.06
SS18L2-201ENST00000011691 PHF23Q9BUL5 403 aaPredicted RBP27.88■■■□□ 2.05
SS18L2-201ENST00000011691 CHMP7Q8WUX9 453 aaPredicted RBP27.87■■■□□ 2.05
SS18L2-201ENST00000011691 GAPVD1Q14C86 1478 aa27.86■■■□□ 2.05
SS18L2-201ENST00000011691 ABCA5Q8WWZ7 1642 aa27.85■■■□□ 2.05
SS18L2-201ENST00000011691 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
SS18L2-201ENST00000011691 SYNJ1O43426 1573 aa27.85■■■□□ 2.05
SS18L2-201ENST00000011691 CLASP1Q7Z460 1538 aa27.84■■■□□ 2.05
SS18L2-201ENST00000011691 SYNJ2O15056 1496 aa27.83■■■□□ 2.05
SS18L2-201ENST00000011691 ABCA10Q8WWZ4 1543 aa27.83■■■□□ 2.05
SS18L2-201ENST00000011691 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
SS18L2-201ENST00000011691 TOP2BQ02880 1626 aa27.78■■■□□ 2.04
SS18L2-201ENST00000011691 WRNQ14191 1432 aaPredicted RBP eCLIP27.75■■■□□ 2.03
SS18L2-201ENST00000011691 ADAMTS12P58397 1594 aa27.64■■■□□ 2.01
SS18L2-201ENST00000011691 GRIN2AQ12879 1464 aa27.59■■■□□ 2.01
SS18L2-201ENST00000011691 TRHP20396 242 aaPredicted RBP27.57■■■□□ 2
SS18L2-201ENST00000011691 CEP170Q5SW79 1584 aa27.54■■■□□ 2
SS18L2-201ENST00000011691 ERICH3Q5RHP9 1530 aa27.5■■□□□ 1.99
SS18L2-201ENST00000011691 FHAD1B1AJZ9 1412 aa27.49■■□□□ 1.99
SS18L2-201ENST00000011691 ERCC6L2Q5T890 1561 aa27.48■■□□□ 1.99
SS18L2-201ENST00000011691 NUP160Q12769 1436 aa27.45■■□□□ 1.98
SS18L2-201ENST00000011691 SHROOM2Q13796 1616 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms