RNA–Protein interactions for RNA: ENST00000009530.11

CD74-201, Transcript of CD74 molecule, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CD74, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-201ENST00000009530 NISCHQ9Y2I1 1504 aa30.71■■■□□ 2.51
CD74-201ENST00000009530 CCDC180Q9P1Z9 1646 aa27.5■■□□□ 1.99
CD74-201ENST00000009530 ABCC9O60706 1549 aa27.47■■□□□ 1.99
CD74-201ENST00000009530 RB1CC1Q8TDY2 1594 aa26.11■■□□□ 1.77
CD74-201ENST00000009530 NACADO15069 1562 aa25.94■■□□□ 1.74
CD74-201ENST00000009530 DCAF8L2P0C7V8 631 aa25.84■■□□□ 1.73
CD74-201ENST00000009530 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
CD74-201ENST00000009530 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
CD74-201ENST00000009530 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
CD74-201ENST00000009530 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.68
CD74-201ENST00000009530 ZCCHC6Q5VYS8 1495 aaKnown RBP25.5■■□□□ 1.67
CD74-201ENST00000009530 BICRAQ9NZM4 1560 aa25.46■■□□□ 1.67
CD74-201ENST00000009530 DCAF1Q9Y4B6 1507 aa25.32■■□□□ 1.64
CD74-201ENST00000009530 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
CD74-201ENST00000009530 SHROOM4Q9ULL8 1493 aa24.94■■□□□ 1.58
CD74-201ENST00000009530 CC2D2AQ9P2K1 1620 aa24.81■■□□□ 1.56
CD74-201ENST00000009530 EIF4G1Q04637 1599 aaKnown RBP24.77■■□□□ 1.56
CD74-201ENST00000009530 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
CD74-201ENST00000009530 SMARCA4P51532 1647 aa23.97■■□□□ 1.43
CD74-201ENST00000009530 NCAPD3P42695 1498 aa23.95■■□□□ 1.42
CD74-201ENST00000009530 ATAD2BQ9ULI0 1458 aa23.94■■□□□ 1.42
CD74-201ENST00000009530 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
CD74-201ENST00000009530 HMGXB3Q12766 1538 aa23.81■■□□□ 1.4
CD74-201ENST00000009530 BAZ1AQ9NRL2 1556 aaPredicted RBP23.8■■□□□ 1.4
CD74-201ENST00000009530 MROH2BQ7Z745 1585 aa23.73■■□□□ 1.39
CD74-201ENST00000009530 BAZ1BQ9UIG0 1483 aaKnown RBP23.69■■□□□ 1.38
CD74-201ENST00000009530 PEG3Q9GZU2 1588 aa23.69■■□□□ 1.38
CD74-201ENST00000009530 NESP48681 1621 aa23.67■■□□□ 1.38
CD74-201ENST00000009530 ERCC6Q03468 1493 aa23.63■■□□□ 1.37
CD74-201ENST00000009530 CUX2O14529 1486 aa23.54■■□□□ 1.36
CD74-201ENST00000009530 WIZO95785 1651 aa23.47■■□□□ 1.35
CD74-201ENST00000009530 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
CD74-201ENST00000009530 DNAJC5Q9H3Z4 198 aa23.4■■□□□ 1.34
CD74-201ENST00000009530 THOC2Q8NI27 1593 aaKnown RBP23.4■■□□□ 1.34
CD74-201ENST00000009530 KIF21AQ7Z4S6 1674 aa23.37■■□□□ 1.33
CD74-201ENST00000009530 RSF1Q96T23 1441 aaPredicted RBP23.23■■□□□ 1.31
CD74-201ENST00000009530 CADPSQ9ULU8 1353 aa23.22■■□□□ 1.31
CD74-201ENST00000009530 PDS5BQ9NTI5 1447 aa23.21■■□□□ 1.31
CD74-201ENST00000009530 TOP2AP11388 1531 aaKnown RBP23.11■■□□□ 1.29
CD74-201ENST00000009530 MRC2Q9UBG0 1479 aa23.08■■□□□ 1.29
CD74-201ENST00000009530 WDR62O43379 1518 aa23.03■■□□□ 1.28
CD74-201ENST00000009530 CFTRP13569 1480 aa23■■□□□ 1.27
CD74-201ENST00000009530 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
CD74-201ENST00000009530 CEP164Q9UPV0 1460 aa23■■□□□ 1.27
CD74-201ENST00000009530 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
CD74-201ENST00000009530 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
CD74-201ENST00000009530 PRDM2Q13029 1718 aa22.82■■□□□ 1.24
CD74-201ENST00000009530 TOPBP1Q92547 1522 aa22.6■■□□□ 1.21
CD74-201ENST00000009530 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
CD74-201ENST00000009530 IFT140Q96RY7 1462 aa22.51■■□□□ 1.19
CD74-201ENST00000009530 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
CD74-201ENST00000009530 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
CD74-201ENST00000009530 EIF4G3O43432 1585 aaKnown RBP22.45■■□□□ 1.18
CD74-201ENST00000009530 OSCARQ8IYS5 282 aa22.43■■□□□ 1.18
CD74-201ENST00000009530 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
CD74-201ENST00000009530 TARBP1Q13395 1621 aaKnown RBP22.42■■□□□ 1.18
CD74-201ENST00000009530 POLA1P09884 1462 aaPredicted RBP22.38■■□□□ 1.17
CD74-201ENST00000009530 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.17
CD74-201ENST00000009530 RAD54L2Q9Y4B4 1467 aa22.33■■□□□ 1.16
CD74-201ENST00000009530 CUX1P39880 1505 aa22.28■■□□□ 1.16
CD74-201ENST00000009530 CHD1O14646 1710 aa22.28■■□□□ 1.16
CD74-201ENST00000009530 RIMBP3CA6NJZ7 1639 aa22.28■■□□□ 1.16
CD74-201ENST00000009530 RIMBP3BA6NNM3 1639 aa22.28■■□□□ 1.16
CD74-201ENST00000009530 RIMBP3Q9UFD9 1639 aa22.28■■□□□ 1.16
CD74-201ENST00000009530 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
CD74-201ENST00000009530 FGD5Q6ZNL6 1462 aa22.26■■□□□ 1.15
CD74-201ENST00000009530 SOGA1O94964 1423 aa22.23■■□□□ 1.15
CD74-201ENST00000009530 TDRD9Q8NDG6 1382 aaKnown RBP22.22■■□□□ 1.15
CD74-201ENST00000009530 ARHGEF11O15085 1522 aa22.19■■□□□ 1.14
CD74-201ENST00000009530 WDR97A6NE52 1622 aa22.14■■□□□ 1.14
CD74-201ENST00000009530 SNAPC4Q5SXM2 1469 aa22.13■■□□□ 1.13
CD74-201ENST00000009530 FBLN2P98095 1184 aa22.11■■□□□ 1.13
CD74-201ENST00000009530 PBRM1Q86U86 1689 aa22.03■■□□□ 1.12
CD74-201ENST00000009530 GRIN2BQ13224 1484 aa22.02■■□□□ 1.12
CD74-201ENST00000009530 ARAP1Q96P48 1450 aa22■■□□□ 1.11
CD74-201ENST00000009530 MAGI1Q96QZ7 1491 aaPredicted RBP22■■□□□ 1.11
CD74-201ENST00000009530 CLASP1Q7Z460 1538 aa21.99■■□□□ 1.11
CD74-201ENST00000009530 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
CD74-201ENST00000009530 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
CD74-201ENST00000009530 ABCA10Q8WWZ4 1543 aa21.97■■□□□ 1.11
CD74-201ENST00000009530 CYB5RLQ6IPT4 315 aa21.96■■□□□ 1.11
CD74-201ENST00000009530 SYNJ1O43426 1573 aa21.95■■□□□ 1.11
CD74-201ENST00000009530 SYNJ2O15056 1496 aa21.94■■□□□ 1.1
CD74-201ENST00000009530 BIVM-ERCC5R4GMW8 1640 aa21.94■■□□□ 1.1
CD74-201ENST00000009530 CHMP7Q8WUX9 453 aaPredicted RBP21.93■■□□□ 1.1
CD74-201ENST00000009530 TOP2BQ02880 1626 aa21.91■■□□□ 1.1
CD74-201ENST00000009530 WRNQ14191 1432 aaPredicted RBP eCLIP21.88■■□□□ 1.09
CD74-201ENST00000009530 ADAMTS12P58397 1594 aa21.81■■□□□ 1.08
CD74-201ENST00000009530 GRIN2AQ12879 1464 aa21.77■■□□□ 1.08
CD74-201ENST00000009530 CEP170Q5SW79 1584 aa21.74■■□□□ 1.07
CD74-201ENST00000009530 ERCC6L2Q5T890 1561 aa21.74■■□□□ 1.07
CD74-201ENST00000009530 NUP160Q12769 1436 aa21.69■■□□□ 1.06
CD74-201ENST00000009530 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
CD74-201ENST00000009530 FHAD1B1AJZ9 1412 aa21.67■■□□□ 1.06
CD74-201ENST00000009530 TRHP20396 242 aaPredicted RBP21.67■■□□□ 1.06
CD74-201ENST00000009530 SHROOM2Q13796 1616 aa21.61■■□□□ 1.05
CD74-201ENST00000009530 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
CD74-201ENST00000009530 PRG4Q92954 1404 aaPredicted RBP21.46■■□□□ 1.03
CD74-201ENST00000009530 IGF1RP08069 1367 aa21.44■■□□□ 1.02
CD74-201ENST00000009530 KIF27Q86VH2 1401 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms