RNA–Protein interactions for RNA: ENSMUST00000197878.1

Gm40038-201, mousemouse

TSL 1 (best) BASIC

Gene Gm40038, Length 1,370 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm40038-201ENSMUST00000197878 Chic1Q8CBW7 227 aa20.77■□□□□ 0.92
Gm40038-201ENSMUST00000197878 Mapk8ip2Q9ERE9 830 aa20.07■□□□□ 0.8
Gm40038-201ENSMUST00000197878 Phf23Q8BSN5 401 aa18.53■□□□□ 0.56
Gm40038-201ENSMUST00000197878 Plppr3Q7TPB0 716 aa18.1■□□□□ 0.49
Gm40038-201ENSMUST00000197878 Gab3Q8BSM5 595 aa17.93■□□□□ 0.46
Gm40038-201ENSMUST00000197878 Senp3Q9EP97 568 aaKnown RBP17.07■□□□□ 0.32
Gm40038-201ENSMUST00000197878 Kcna4Q61423 654 aa16.46■□□□□ 0.23
Gm40038-201ENSMUST00000197878 Trap1aP19473 224 aa15.25■□□□□ 0.03
Gm40038-201ENSMUST00000197878 Hoxd11P23813 323 aa15.04■□□□□ -0
Gm40038-201ENSMUST00000197878 Fam163aQ8CAA5 168 aa14.91□□□□□ -0.02
Gm40038-201ENSMUST00000197878 Dmrt2Q8BG36 561 aa14.73□□□□□ -0.05
Gm40038-201ENSMUST00000197878 Znf219Q6IQX8 726 aa14.54□□□□□ -0.08
Gm40038-201ENSMUST00000197878 Ppargc1bQ8VHJ7 1014 aa14.48□□□□□ -0.09
Gm40038-201ENSMUST00000197878 Chrna2Q91X60 512 aa14.43□□□□□ -0.1
Gm40038-201ENSMUST00000197878 Rsph4aQ8BYM7 716 aa14.31□□□□□ -0.12
Gm40038-201ENSMUST00000197878 Slc4a1apE9PX68 744 aa14.3□□□□□ -0.12
Gm40038-201ENSMUST00000197878 Dnajc5bQ9CQ94 199 aa14□□□□□ -0.17
Gm40038-201ENSMUST00000197878 Rimbp2Q80U40 1072 aa13.99□□□□□ -0.17
Gm40038-201ENSMUST00000197878 Ppp4r2Q0VGB7 417 aa13.96□□□□□ -0.18
Gm40038-201ENSMUST00000197878 ArsiQ32KI9 573 aa13.93□□□□□ -0.18
Gm40038-201ENSMUST00000197878 Hs6st3Q9QYK4 470 aa13.92□□□□□ -0.18
Gm40038-201ENSMUST00000197878 Atf5O70191 283 aa13.85□□□□□ -0.19
Gm40038-201ENSMUST00000197878 Akt1s1Q9D1F4 257 aa13.72□□□□□ -0.21
Gm40038-201ENSMUST00000197878 1700123L14RikQ3V2K7 440 aa13.59□□□□□ -0.23
Gm40038-201ENSMUST00000197878 Slc34a2Q9DBP0 697 aa13.45□□□□□ -0.26
Gm40038-201ENSMUST00000197878 Bach1P97302 739 aa13.31□□□□□ -0.28
Gm40038-201ENSMUST00000197878 Sox12Q04890 314 aa13.28□□□□□ -0.28
Gm40038-201ENSMUST00000197878 Fam71e1A1L3C1 212 aa13.06□□□□□ -0.32
Gm40038-201ENSMUST00000197878 WdpcpQ8C456 722 aa13.06□□□□□ -0.32
Gm40038-201ENSMUST00000197878 Ube2uB1AUC4 352 aa13.05□□□□□ -0.32
Gm40038-201ENSMUST00000197878 Nlrp6Q91WS2 869 aa12.96□□□□□ -0.33
Gm40038-201ENSMUST00000197878 Cdca7Q9D0M2 382 aa12.93□□□□□ -0.34
Gm40038-201ENSMUST00000197878 C1qtnf12Q8R2Z0 308 aa12.82□□□□□ -0.36
Gm40038-201ENSMUST00000197878 Ifnlr1Q8CGK5 535 aa12.81□□□□□ -0.36
Gm40038-201ENSMUST00000197878 AcrbpQ3V140 540 aa12.8□□□□□ -0.36
Gm40038-201ENSMUST00000197878 GapdhsQ64467 440 aa12.8□□□□□ -0.36
Gm40038-201ENSMUST00000197878 Npm2Q80W85 207 aa12.72□□□□□ -0.37
Gm40038-201ENSMUST00000197878 G430095P16RikE9Q913 147 aa12.64□□□□□ -0.39
Gm40038-201ENSMUST00000197878 Prm3Q62100 101 aa12.63□□□□□ -0.39
Gm40038-201ENSMUST00000197878 Pde4cQ3UEI1 686 aa12.62□□□□□ -0.39
Gm40038-201ENSMUST00000197878 Riok3Q9DBU3 519 aaKnown RBP12.62□□□□□ -0.39
Gm40038-201ENSMUST00000197878 Trim41Q5NCC3 630 aa12.6□□□□□ -0.39
Gm40038-201ENSMUST00000197878 MyclP10166 368 aa12.59□□□□□ -0.39
Gm40038-201ENSMUST00000197878 Grwd1Q810D6 446 aaKnown RBP12.56□□□□□ -0.4
Gm40038-201ENSMUST00000197878 Egfem1Q8C088 590 aa12.56□□□□□ -0.4
Gm40038-201ENSMUST00000197878 Rtn4Q99P72 1162 aaKnown RBP12.52□□□□□ -0.41
Gm40038-201ENSMUST00000197878 Zbtb7aO88939 569 aaKnown RBP12.49□□□□□ -0.41
Gm40038-201ENSMUST00000197878 Zbtb12Q9Z150 459 aa12.49□□□□□ -0.41
Gm40038-201ENSMUST00000197878 Znf704Q9ERQ3 566 aa12.45□□□□□ -0.42
Gm40038-201ENSMUST00000197878 Rnf216P58283 853 aa12.41□□□□□ -0.42
Gm40038-201ENSMUST00000197878 Slc4a5E9Q3M5 1116 aa12.4□□□□□ -0.42
Gm40038-201ENSMUST00000197878 Ms4a5Q810P8 197 aa12.36□□□□□ -0.43
Gm40038-201ENSMUST00000197878 Styxl1Q9DAR2 321 aa12.32□□□□□ -0.44
Gm40038-201ENSMUST00000197878 Abcb7Q61102 752 aaKnown RBP12.25□□□□□ -0.45
Gm40038-201ENSMUST00000197878 Tshz2Q68FE9 1030 aa12.25□□□□□ -0.45
Gm40038-201ENSMUST00000197878 Gtpbp6Q3U6U5 514 aa12.24□□□□□ -0.45
Gm40038-201ENSMUST00000197878 Nkx1-1G3UXB3 402 aa12.11□□□□□ -0.47
Gm40038-201ENSMUST00000197878 Fbln2P37889 1221 aa12.06□□□□□ -0.48
Gm40038-201ENSMUST00000197878 MpndQ3TV65 487 aa11.99□□□□□ -0.49
Gm40038-201ENSMUST00000197878 Ehmt2Q9Z148 1263 aaKnown RBP11.99□□□□□ -0.49
Gm40038-201ENSMUST00000197878 Skida1Q80YR3 822 aa11.95□□□□□ -0.5
Gm40038-201ENSMUST00000197878 Npm3Q9CPP0 175 aaKnown RBP11.93□□□□□ -0.5
Gm40038-201ENSMUST00000197878 Tcf3P15806 651 aa11.8□□□□□ -0.52
Gm40038-201ENSMUST00000197878 Kcnn1Q9EQR3 537 aa11.72□□□□□ -0.53
Gm40038-201ENSMUST00000197878 Ecm2Q5FW85 670 aa11.71□□□□□ -0.53
Gm40038-201ENSMUST00000197878 Prr29B1ARI9 187 aa11.64□□□□□ -0.55
Gm40038-201ENSMUST00000197878 Ppp1r37Q8BKR5 712 aa11.61□□□□□ -0.55
Gm40038-201ENSMUST00000197878 Lrrc43Q3V0L5 667 aa11.55□□□□□ -0.56
Gm40038-201ENSMUST00000197878 Pitpnm1O35954 1243 aa11.54□□□□□ -0.56
Gm40038-201ENSMUST00000197878 Znf703P0CL69 594 aa11.54□□□□□ -0.56
Gm40038-201ENSMUST00000197878 Clcn6O35454 870 aa11.49□□□□□ -0.57
Gm40038-201ENSMUST00000197878 Jarid2Q62315 1234 aa11.47□□□□□ -0.57
Gm40038-201ENSMUST00000197878 Prdm10Q3UTQ7 1184 aa11.45□□□□□ -0.58
Gm40038-201ENSMUST00000197878 Trim35Q8C006 501 aa11.44□□□□□ -0.58
Gm40038-201ENSMUST00000197878 Hnrnpul2Q00PI9 745 aaKnown RBP11.42□□□□□ -0.58
Gm40038-201ENSMUST00000197878 Ildr2B5TVM2 661 aa11.41□□□□□ -0.58
Gm40038-201ENSMUST00000197878 Kank3Q9Z1P7 791 aa11.41□□□□□ -0.58
Gm40038-201ENSMUST00000197878 Cadps2Q8BYR5 1297 aa11.4□□□□□ -0.59
Gm40038-201ENSMUST00000197878 Cacnb1Q8R3Z5 597 aa11.4□□□□□ -0.59
Gm40038-201ENSMUST00000197878 MycnP03966 462 aaKnown RBP11.34□□□□□ -0.59
Gm40038-201ENSMUST00000197878 Pip4p2Q9CZX7 257 aa11.34□□□□□ -0.59
Gm40038-201ENSMUST00000197878 Nyap1Q6PFX7 833 aa11.33□□□□□ -0.6
Gm40038-201ENSMUST00000197878 Hdac5Q9Z2V6 1113 aa11.27□□□□□ -0.61
Gm40038-201ENSMUST00000197878 Spock2Q9ER58 423 aa11.22□□□□□ -0.61
Gm40038-201ENSMUST00000197878 CatipB9EKE5 520 aa11.2□□□□□ -0.62
Gm40038-201ENSMUST00000197878 Sra1Q80VJ2 232 aa11.2□□□□□ -0.62
Gm40038-201ENSMUST00000197878 SnphQ80U23 495 aa11.18□□□□□ -0.62
Gm40038-201ENSMUST00000197878 Gm13697A2AK42 830 aa11.15□□□□□ -0.63
Gm40038-201ENSMUST00000197878 Dok7Q18PE0 504 aa11.11□□□□□ -0.63
Gm40038-201ENSMUST00000197878 Pde4dQ01063 747 aa11.06□□□□□ -0.64
Gm40038-201ENSMUST00000197878 Fam117bQ3U3E2 584 aa11.04□□□□□ -0.64
Gm40038-201ENSMUST00000197878 Ppp6r1Q7TSI3 856 aa10.99□□□□□ -0.65
Gm40038-201ENSMUST00000197878 Repin1Q5U4E2 545 aa10.98□□□□□ -0.65
Gm40038-201ENSMUST00000197878 Zbtb7bQ64321 544 aa10.98□□□□□ -0.65
Gm40038-201ENSMUST00000197878 Ferd3lQ923Z4 168 aa10.97□□□□□ -0.65
Gm40038-201ENSMUST00000197878 Pdap1Q3UHX2 181 aaKnown RBP10.96□□□□□ -0.65
Gm40038-201ENSMUST00000197878 PygbQ8CI94 843 aaKnown RBP10.96□□□□□ -0.65
Gm40038-201ENSMUST00000197878 Atad2Q8CDM1 1040 aa10.94□□□□□ -0.66
Gm40038-201ENSMUST00000197878 Slc24a1Q91WD8 1130 aa10.94□□□□□ -0.66
Gm40038-201ENSMUST00000197878 Zbtb22Q9Z0G7 638 aa10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 71.7 ms