RNA–Protein interactions for RNA: ENSMUST00000190424.6

Gm28074-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28074, Length 1,497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28074-201ENSMUST00000190424 Chic1Q8CBW7 227 aa22.87■■□□□ 1.25
Gm28074-201ENSMUST00000190424 Mapk8ip2Q9ERE9 830 aa22.35■■□□□ 1.17
Gm28074-201ENSMUST00000190424 Phf23Q8BSN5 401 aa20.57■□□□□ 0.88
Gm28074-201ENSMUST00000190424 Plppr3Q7TPB0 716 aa19.79■□□□□ 0.76
Gm28074-201ENSMUST00000190424 Gab3Q8BSM5 595 aa19.68■□□□□ 0.74
Gm28074-201ENSMUST00000190424 Senp3Q9EP97 568 aaKnown RBP18.85■□□□□ 0.61
Gm28074-201ENSMUST00000190424 Kcna4Q61423 654 aa18.01■□□□□ 0.47
Gm28074-201ENSMUST00000190424 Trap1aP19473 224 aa16.63■□□□□ 0.25
Gm28074-201ENSMUST00000190424 Hoxd11P23813 323 aa16.63■□□□□ 0.25
Gm28074-201ENSMUST00000190424 Fam163aQ8CAA5 168 aa16.61■□□□□ 0.25
Gm28074-201ENSMUST00000190424 Dmrt2Q8BG36 561 aa16.1■□□□□ 0.17
Gm28074-201ENSMUST00000190424 Znf219Q6IQX8 726 aa15.98■□□□□ 0.15
Gm28074-201ENSMUST00000190424 Ppargc1bQ8VHJ7 1014 aa15.76■□□□□ 0.11
Gm28074-201ENSMUST00000190424 Chrna2Q91X60 512 aa15.75■□□□□ 0.11
Gm28074-201ENSMUST00000190424 Rsph4aQ8BYM7 716 aa15.64■□□□□ 0.09
Gm28074-201ENSMUST00000190424 Rimbp2Q80U40 1072 aa15.42■□□□□ 0.06
Gm28074-201ENSMUST00000190424 Slc4a1apE9PX68 744 aa15.4■□□□□ 0.06
Gm28074-201ENSMUST00000190424 Dnajc5bQ9CQ94 199 aa15.33■□□□□ 0.05
Gm28074-201ENSMUST00000190424 ArsiQ32KI9 573 aa15.33■□□□□ 0.04
Gm28074-201ENSMUST00000190424 Atf5O70191 283 aa15.31■□□□□ 0.04
Gm28074-201ENSMUST00000190424 Ppp4r2Q0VGB7 417 aa15.18■□□□□ 0.02
Gm28074-201ENSMUST00000190424 Hs6st3Q9QYK4 470 aa15.14■□□□□ 0.01
Gm28074-201ENSMUST00000190424 Akt1s1Q9D1F4 257 aa15.13■□□□□ 0.01
Gm28074-201ENSMUST00000190424 Slc34a2Q9DBP0 697 aa14.84□□□□□ -0.03
Gm28074-201ENSMUST00000190424 1700123L14RikQ3V2K7 440 aa14.76□□□□□ -0.05
Gm28074-201ENSMUST00000190424 Bach1P97302 739 aa14.63□□□□□ -0.07
Gm28074-201ENSMUST00000190424 Sox12Q04890 314 aa14.52□□□□□ -0.08
Gm28074-201ENSMUST00000190424 WdpcpQ8C456 722 aa14.26□□□□□ -0.13
Gm28074-201ENSMUST00000190424 Fam71e1A1L3C1 212 aa14.09□□□□□ -0.15
Gm28074-201ENSMUST00000190424 Cdca7Q9D0M2 382 aa14.05□□□□□ -0.16
Gm28074-201ENSMUST00000190424 C1qtnf12Q8R2Z0 308 aa14.03□□□□□ -0.16
Gm28074-201ENSMUST00000190424 Nlrp6Q91WS2 869 aa13.99□□□□□ -0.17
Gm28074-201ENSMUST00000190424 GapdhsQ64467 440 aa13.94□□□□□ -0.18
Gm28074-201ENSMUST00000190424 Ifnlr1Q8CGK5 535 aa13.82□□□□□ -0.2
Gm28074-201ENSMUST00000190424 Egfem1Q8C088 590 aa13.79□□□□□ -0.2
Gm28074-201ENSMUST00000190424 G430095P16RikE9Q913 147 aa13.78□□□□□ -0.2
Gm28074-201ENSMUST00000190424 Znf704Q9ERQ3 566 aa13.77□□□□□ -0.21
Gm28074-201ENSMUST00000190424 Zbtb7aO88939 569 aaKnown RBP13.76□□□□□ -0.21
Gm28074-201ENSMUST00000190424 Grwd1Q810D6 446 aaKnown RBP13.72□□□□□ -0.21
Gm28074-201ENSMUST00000190424 Ube2uB1AUC4 352 aa13.71□□□□□ -0.21
Gm28074-201ENSMUST00000190424 Slc4a5E9Q3M5 1116 aa13.7□□□□□ -0.22
Gm28074-201ENSMUST00000190424 AcrbpQ3V140 540 aa13.69□□□□□ -0.22
Gm28074-201ENSMUST00000190424 Riok3Q9DBU3 519 aaKnown RBP13.69□□□□□ -0.22
Gm28074-201ENSMUST00000190424 Pde4cQ3UEI1 686 aa13.67□□□□□ -0.22
Gm28074-201ENSMUST00000190424 Npm2Q80W85 207 aa13.63□□□□□ -0.23
Gm28074-201ENSMUST00000190424 Ms4a5Q810P8 197 aa13.61□□□□□ -0.23
Gm28074-201ENSMUST00000190424 MyclP10166 368 aa13.57□□□□□ -0.24
Gm28074-201ENSMUST00000190424 Trim41Q5NCC3 630 aa13.56□□□□□ -0.24
Gm28074-201ENSMUST00000190424 Zbtb12Q9Z150 459 aa13.51□□□□□ -0.25
Gm28074-201ENSMUST00000190424 Rnf216P58283 853 aa13.49□□□□□ -0.25
Gm28074-201ENSMUST00000190424 Prm3Q62100 101 aa13.48□□□□□ -0.25
Gm28074-201ENSMUST00000190424 Abcb7Q61102 752 aaKnown RBP13.47□□□□□ -0.25
Gm28074-201ENSMUST00000190424 Gtpbp6Q3U6U5 514 aa13.41□□□□□ -0.26
Gm28074-201ENSMUST00000190424 Rtn4Q99P72 1162 aaKnown RBP13.34□□□□□ -0.27
Gm28074-201ENSMUST00000190424 Styxl1Q9DAR2 321 aa13.29□□□□□ -0.28
Gm28074-201ENSMUST00000190424 Nkx1-1G3UXB3 402 aa13.28□□□□□ -0.28
Gm28074-201ENSMUST00000190424 Tshz2Q68FE9 1030 aa13.24□□□□□ -0.29
Gm28074-201ENSMUST00000190424 Fbln2P37889 1221 aa13.15□□□□□ -0.3
Gm28074-201ENSMUST00000190424 Npm3Q9CPP0 175 aaKnown RBP13.03□□□□□ -0.32
Gm28074-201ENSMUST00000190424 MpndQ3TV65 487 aa13□□□□□ -0.33
Gm28074-201ENSMUST00000190424 Skida1Q80YR3 822 aa12.9□□□□□ -0.34
Gm28074-201ENSMUST00000190424 Kcnn1Q9EQR3 537 aa12.82□□□□□ -0.36
Gm28074-201ENSMUST00000190424 Znf703P0CL69 594 aa12.79□□□□□ -0.36
Gm28074-201ENSMUST00000190424 Ildr2B5TVM2 661 aa12.78□□□□□ -0.36
Gm28074-201ENSMUST00000190424 Prr29B1ARI9 187 aa12.75□□□□□ -0.37
Gm28074-201ENSMUST00000190424 Tcf3P15806 651 aa12.74□□□□□ -0.37
Gm28074-201ENSMUST00000190424 Pitpnm1O35954 1243 aa12.71□□□□□ -0.38
Gm28074-201ENSMUST00000190424 Ppp1r37Q8BKR5 712 aa12.68□□□□□ -0.38
Gm28074-201ENSMUST00000190424 Ehmt2Q9Z148 1263 aaKnown RBP12.66□□□□□ -0.38
Gm28074-201ENSMUST00000190424 Cacnb1Q8R3Z5 597 aa12.64□□□□□ -0.39
Gm28074-201ENSMUST00000190424 Trim35Q8C006 501 aa12.61□□□□□ -0.39
Gm28074-201ENSMUST00000190424 Kank3Q9Z1P7 791 aa12.57□□□□□ -0.4
Gm28074-201ENSMUST00000190424 Clcn6O35454 870 aa12.56□□□□□ -0.4
Gm28074-201ENSMUST00000190424 Pip4p2Q9CZX7 257 aa12.56□□□□□ -0.4
Gm28074-201ENSMUST00000190424 Lrrc43Q3V0L5 667 aa12.54□□□□□ -0.4
Gm28074-201ENSMUST00000190424 Ecm2Q5FW85 670 aa12.51□□□□□ -0.41
Gm28074-201ENSMUST00000190424 Jarid2Q62315 1234 aa12.51□□□□□ -0.41
Gm28074-201ENSMUST00000190424 Cadps2Q8BYR5 1297 aa12.45□□□□□ -0.42
Gm28074-201ENSMUST00000190424 Nyap1Q6PFX7 833 aa12.4□□□□□ -0.43
Gm28074-201ENSMUST00000190424 Hnrnpul2Q00PI9 745 aaKnown RBP12.25□□□□□ -0.45
Gm28074-201ENSMUST00000190424 Sra1Q80VJ2 232 aa12.22□□□□□ -0.45
Gm28074-201ENSMUST00000190424 SnphQ80U23 495 aa12.2□□□□□ -0.46
Gm28074-201ENSMUST00000190424 MycnP03966 462 aaKnown RBP12.17□□□□□ -0.46
Gm28074-201ENSMUST00000190424 Prdm10Q3UTQ7 1184 aa12.17□□□□□ -0.46
Gm28074-201ENSMUST00000190424 Dok7Q18PE0 504 aa12.11□□□□□ -0.47
Gm28074-201ENSMUST00000190424 Hdac5Q9Z2V6 1113 aa12.08□□□□□ -0.47
Gm28074-201ENSMUST00000190424 Pde4dQ01063 747 aa12.05□□□□□ -0.48
Gm28074-201ENSMUST00000190424 Spock2Q9ER58 423 aa12.03□□□□□ -0.48
Gm28074-201ENSMUST00000190424 Repin1Q5U4E2 545 aa12.02□□□□□ -0.48
Gm28074-201ENSMUST00000190424 Fam117bQ3U3E2 584 aa12.01□□□□□ -0.49
Gm28074-201ENSMUST00000190424 Ppp6r1Q7TSI3 856 aa11.99□□□□□ -0.49
Gm28074-201ENSMUST00000190424 Zbtb7bQ64321 544 aa11.96□□□□□ -0.49
Gm28074-201ENSMUST00000190424 Gm13697A2AK42 830 aa11.93□□□□□ -0.5
Gm28074-201ENSMUST00000190424 PygbQ8CI94 843 aaKnown RBP11.93□□□□□ -0.5
Gm28074-201ENSMUST00000190424 CrebzfQ91ZR3 358 aa11.89□□□□□ -0.51
Gm28074-201ENSMUST00000190424 Atad2Q8CDM1 1040 aa11.88□□□□□ -0.51
Gm28074-201ENSMUST00000190424 Pdap1Q3UHX2 181 aaKnown RBP11.86□□□□□ -0.51
Gm28074-201ENSMUST00000190424 Foxp4Q9DBY0 795 aaKnown RBP11.86□□□□□ -0.51
Gm28074-201ENSMUST00000190424 Ferd3lQ923Z4 168 aa11.83□□□□□ -0.52
Gm28074-201ENSMUST00000190424 Chrm1P12657 460 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 121.3 ms