RNA–Protein interactions for RNA: ENSMUST00000189047.1

Gm28956-201, mousemouse

BASIC

Gene Gm28956, Length 427 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28956-201ENSMUST00000189047 Chic1Q8CBW7 227 aa20.62■□□□□ 0.89
Gm28956-201ENSMUST00000189047 Mapk8ip2Q9ERE9 830 aa19.71■□□□□ 0.75
Gm28956-201ENSMUST00000189047 Phf23Q8BSN5 401 aa18.3■□□□□ 0.52
Gm28956-201ENSMUST00000189047 Plppr3Q7TPB0 716 aa18.03■□□□□ 0.48
Gm28956-201ENSMUST00000189047 Gab3Q8BSM5 595 aa17.8■□□□□ 0.44
Gm28956-201ENSMUST00000189047 Senp3Q9EP97 568 aaKnown RBP16.92■□□□□ 0.3
Gm28956-201ENSMUST00000189047 Kcna4Q61423 654 aa16.41■□□□□ 0.22
Gm28956-201ENSMUST00000189047 Trap1aP19473 224 aa15.17■□□□□ 0.02
Gm28956-201ENSMUST00000189047 Hoxd11P23813 323 aa14.93□□□□□ -0.02
Gm28956-201ENSMUST00000189047 Dmrt2Q8BG36 561 aa14.71□□□□□ -0.05
Gm28956-201ENSMUST00000189047 Fam163aQ8CAA5 168 aa14.59□□□□□ -0.07
Gm28956-201ENSMUST00000189047 Ppargc1bQ8VHJ7 1014 aa14.46□□□□□ -0.09
Gm28956-201ENSMUST00000189047 Znf219Q6IQX8 726 aa14.43□□□□□ -0.1
Gm28956-201ENSMUST00000189047 Slc4a1apE9PX68 744 aa14.39□□□□□ -0.11
Gm28956-201ENSMUST00000189047 Chrna2Q91X60 512 aa14.33□□□□□ -0.12
Gm28956-201ENSMUST00000189047 Rsph4aQ8BYM7 716 aa14.19□□□□□ -0.14
Gm28956-201ENSMUST00000189047 Dnajc5bQ9CQ94 199 aa14.08□□□□□ -0.16
Gm28956-201ENSMUST00000189047 Hs6st3Q9QYK4 470 aa13.92□□□□□ -0.18
Gm28956-201ENSMUST00000189047 Ppp4r2Q0VGB7 417 aa13.91□□□□□ -0.18
Gm28956-201ENSMUST00000189047 Rimbp2Q80U40 1072 aa13.84□□□□□ -0.19
Gm28956-201ENSMUST00000189047 Atf5O70191 283 aa13.74□□□□□ -0.21
Gm28956-201ENSMUST00000189047 ArsiQ32KI9 573 aa13.71□□□□□ -0.21
Gm28956-201ENSMUST00000189047 Akt1s1Q9D1F4 257 aa13.59□□□□□ -0.23
Gm28956-201ENSMUST00000189047 1700123L14RikQ3V2K7 440 aa13.56□□□□□ -0.24
Gm28956-201ENSMUST00000189047 Ube2uB1AUC4 352 aa13.39□□□□□ -0.27
Gm28956-201ENSMUST00000189047 Slc34a2Q9DBP0 697 aa13.37□□□□□ -0.27
Gm28956-201ENSMUST00000189047 Sox12Q04890 314 aa13.23□□□□□ -0.29
Gm28956-201ENSMUST00000189047 Bach1P97302 739 aa13.19□□□□□ -0.3
Gm28956-201ENSMUST00000189047 Fam71e1A1L3C1 212 aa13.18□□□□□ -0.3
Gm28956-201ENSMUST00000189047 Nlrp6Q91WS2 869 aa13.04□□□□□ -0.32
Gm28956-201ENSMUST00000189047 Cdca7Q9D0M2 382 aa12.97□□□□□ -0.33
Gm28956-201ENSMUST00000189047 WdpcpQ8C456 722 aa12.95□□□□□ -0.34
Gm28956-201ENSMUST00000189047 AcrbpQ3V140 540 aa12.94□□□□□ -0.34
Gm28956-201ENSMUST00000189047 Npm2Q80W85 207 aa12.85□□□□□ -0.35
Gm28956-201ENSMUST00000189047 C1qtnf12Q8R2Z0 308 aa12.85□□□□□ -0.35
Gm28956-201ENSMUST00000189047 Ifnlr1Q8CGK5 535 aa12.76□□□□□ -0.37
Gm28956-201ENSMUST00000189047 Prm3Q62100 101 aa12.74□□□□□ -0.37
Gm28956-201ENSMUST00000189047 Pde4cQ3UEI1 686 aa12.71□□□□□ -0.37
Gm28956-201ENSMUST00000189047 Trim41Q5NCC3 630 aa12.7□□□□□ -0.38
Gm28956-201ENSMUST00000189047 Rtn4Q99P72 1162 aaKnown RBP12.7□□□□□ -0.38
Gm28956-201ENSMUST00000189047 Riok3Q9DBU3 519 aaKnown RBP12.67□□□□□ -0.38
Gm28956-201ENSMUST00000189047 MyclP10166 368 aa12.65□□□□□ -0.38
Gm28956-201ENSMUST00000189047 G430095P16RikE9Q913 147 aa12.56□□□□□ -0.4
Gm28956-201ENSMUST00000189047 Zbtb12Q9Z150 459 aa12.51□□□□□ -0.41
Gm28956-201ENSMUST00000189047 Grwd1Q810D6 446 aaKnown RBP12.45□□□□□ -0.42
Gm28956-201ENSMUST00000189047 Egfem1Q8C088 590 aa12.42□□□□□ -0.42
Gm28956-201ENSMUST00000189047 Rnf216P58283 853 aa12.39□□□□□ -0.43
Gm28956-201ENSMUST00000189047 Styxl1Q9DAR2 321 aa12.39□□□□□ -0.43
Gm28956-201ENSMUST00000189047 Zbtb7aO88939 569 aaKnown RBP12.35□□□□□ -0.43
Gm28956-201ENSMUST00000189047 Tshz2Q68FE9 1030 aa12.3□□□□□ -0.44
Gm28956-201ENSMUST00000189047 Ms4a5Q810P8 197 aa12.28□□□□□ -0.44
Gm28956-201ENSMUST00000189047 Znf704Q9ERQ3 566 aa12.26□□□□□ -0.45
Gm28956-201ENSMUST00000189047 GapdhsQ64467 440 aa12.23□□□□□ -0.45
Gm28956-201ENSMUST00000189047 Slc4a5E9Q3M5 1116 aa12.22□□□□□ -0.45
Gm28956-201ENSMUST00000189047 Ehmt2Q9Z148 1263 aaKnown RBP12.18□□□□□ -0.46
Gm28956-201ENSMUST00000189047 Gtpbp6Q3U6U5 514 aa12.16□□□□□ -0.46
Gm28956-201ENSMUST00000189047 Abcb7Q61102 752 aaKnown RBP12.08□□□□□ -0.48
Gm28956-201ENSMUST00000189047 Fbln2P37889 1221 aa12.02□□□□□ -0.49
Gm28956-201ENSMUST00000189047 Nkx1-1G3UXB3 402 aa11.97□□□□□ -0.49
Gm28956-201ENSMUST00000189047 MpndQ3TV65 487 aa11.95□□□□□ -0.5
Gm28956-201ENSMUST00000189047 Skida1Q80YR3 822 aa11.95□□□□□ -0.5
Gm28956-201ENSMUST00000189047 Npm3Q9CPP0 175 aaKnown RBP11.89□□□□□ -0.51
Gm28956-201ENSMUST00000189047 Tcf3P15806 651 aa11.88□□□□□ -0.51
Gm28956-201ENSMUST00000189047 Ecm2Q5FW85 670 aa11.86□□□□□ -0.51
Gm28956-201ENSMUST00000189047 Prdm10Q3UTQ7 1184 aa11.62□□□□□ -0.55
Gm28956-201ENSMUST00000189047 Ppp1r37Q8BKR5 712 aa11.6□□□□□ -0.55
Gm28956-201ENSMUST00000189047 Kcnn1Q9EQR3 537 aa11.58□□□□□ -0.56
Gm28956-201ENSMUST00000189047 Lrrc43Q3V0L5 667 aa11.57□□□□□ -0.56
Gm28956-201ENSMUST00000189047 Hnrnpul2Q00PI9 745 aaKnown RBP11.5□□□□□ -0.57
Gm28956-201ENSMUST00000189047 CatipB9EKE5 520 aa11.49□□□□□ -0.57
Gm28956-201ENSMUST00000189047 Prr29B1ARI9 187 aa11.45□□□□□ -0.58
Gm28956-201ENSMUST00000189047 Clcn6O35454 870 aa11.45□□□□□ -0.58
Gm28956-201ENSMUST00000189047 Pitpnm1O35954 1243 aa11.43□□□□□ -0.58
Gm28956-201ENSMUST00000189047 Jarid2Q62315 1234 aa11.43□□□□□ -0.58
Gm28956-201ENSMUST00000189047 MycnP03966 462 aaKnown RBP11.41□□□□□ -0.58
Gm28956-201ENSMUST00000189047 Cadps2Q8BYR5 1297 aa11.38□□□□□ -0.59
Gm28956-201ENSMUST00000189047 Znf703P0CL69 594 aa11.34□□□□□ -0.59
Gm28956-201ENSMUST00000189047 Spock2Q9ER58 423 aa11.32□□□□□ -0.6
Gm28956-201ENSMUST00000189047 Trim35Q8C006 501 aa11.31□□□□□ -0.6
Gm28956-201ENSMUST00000189047 Kank3Q9Z1P7 791 aa11.29□□□□□ -0.6
Gm28956-201ENSMUST00000189047 Hdac5Q9Z2V6 1113 aa11.29□□□□□ -0.6
Gm28956-201ENSMUST00000189047 Nyap1Q6PFX7 833 aa11.28□□□□□ -0.6
Gm28956-201ENSMUST00000189047 Ildr2B5TVM2 661 aa11.23□□□□□ -0.61
Gm28956-201ENSMUST00000189047 Sra1Q80VJ2 232 aa11.19□□□□□ -0.62
Gm28956-201ENSMUST00000189047 Pip4p2Q9CZX7 257 aa11.17□□□□□ -0.62
Gm28956-201ENSMUST00000189047 Gm13697A2AK42 830 aa11.15□□□□□ -0.62
Gm28956-201ENSMUST00000189047 Slc24a1Q91WD8 1130 aa11.15□□□□□ -0.62
Gm28956-201ENSMUST00000189047 SnphQ80U23 495 aa11.14□□□□□ -0.63
Gm28956-201ENSMUST00000189047 Cacnb1Q8R3Z5 597 aa11.13□□□□□ -0.63
Gm28956-201ENSMUST00000189047 Fam117bQ3U3E2 584 aa11.05□□□□□ -0.64
Gm28956-201ENSMUST00000189047 Dok7Q18PE0 504 aa11.04□□□□□ -0.64
Gm28956-201ENSMUST00000189047 Ferd3lQ923Z4 168 aa11.04□□□□□ -0.64
Gm28956-201ENSMUST00000189047 Pde4dQ01063 747 aa11.03□□□□□ -0.64
Gm28956-201ENSMUST00000189047 Ppp6r1Q7TSI3 856 aa11□□□□□ -0.65
Gm28956-201ENSMUST00000189047 Pdap1Q3UHX2 181 aaKnown RBP10.99□□□□□ -0.65
Gm28956-201ENSMUST00000189047 Zbtb7bQ64321 544 aa10.98□□□□□ -0.65
Gm28956-201ENSMUST00000189047 Repin1Q5U4E2 545 aa10.96□□□□□ -0.65
Gm28956-201ENSMUST00000189047 Rsph6aQ8CDR2 708 aa10.95□□□□□ -0.66
Gm28956-201ENSMUST00000189047 Chrm1P12657 460 aa10.93□□□□□ -0.66
Gm28956-201ENSMUST00000189047 Atad2Q8CDM1 1040 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 110.5 ms