RNA–Protein interactions for RNA: ENSMUST00000188811.1

Gm28643-201, mousemouse

TSL 5 BASIC

Gene Gm28643, Length 356 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28643-201ENSMUST00000188811 Chic1Q8CBW7 227 aa18.67■□□□□ 0.58
Gm28643-201ENSMUST00000188811 Mapk8ip2Q9ERE9 830 aa17.79■□□□□ 0.44
Gm28643-201ENSMUST00000188811 Phf23Q8BSN5 401 aa16.89■□□□□ 0.29
Gm28643-201ENSMUST00000188811 Plppr3Q7TPB0 716 aa16.53■□□□□ 0.24
Gm28643-201ENSMUST00000188811 Gab3Q8BSM5 595 aa16.22■□□□□ 0.19
Gm28643-201ENSMUST00000188811 Senp3Q9EP97 568 aaKnown RBP15.62■□□□□ 0.09
Gm28643-201ENSMUST00000188811 Kcna4Q61423 654 aa15.41■□□□□ 0.06
Gm28643-201ENSMUST00000188811 Ppargc1bQ8VHJ7 1014 aa13.85□□□□□ -0.19
Gm28643-201ENSMUST00000188811 Dmrt2Q8BG36 561 aa13.81□□□□□ -0.2
Gm28643-201ENSMUST00000188811 Trap1aP19473 224 aa13.7□□□□□ -0.22
Gm28643-201ENSMUST00000188811 Hoxd11P23813 323 aa13.63□□□□□ -0.23
Gm28643-201ENSMUST00000188811 Slc4a1apE9PX68 744 aa13.35□□□□□ -0.27
Gm28643-201ENSMUST00000188811 Ube2uB1AUC4 352 aa12.99□□□□□ -0.33
Gm28643-201ENSMUST00000188811 Atf5O70191 283 aa12.99□□□□□ -0.33
Gm28643-201ENSMUST00000188811 Fam163aQ8CAA5 168 aa12.99□□□□□ -0.33
Gm28643-201ENSMUST00000188811 Znf219Q6IQX8 726 aa12.97□□□□□ -0.33
Gm28643-201ENSMUST00000188811 Dnajc5bQ9CQ94 199 aa12.95□□□□□ -0.34
Gm28643-201ENSMUST00000188811 Chrna2Q91X60 512 aa12.92□□□□□ -0.34
Gm28643-201ENSMUST00000188811 Rsph4aQ8BYM7 716 aa12.79□□□□□ -0.36
Gm28643-201ENSMUST00000188811 Ppp4r2Q0VGB7 417 aa12.78□□□□□ -0.36
Gm28643-201ENSMUST00000188811 Hs6st3Q9QYK4 470 aa12.78□□□□□ -0.36
Gm28643-201ENSMUST00000188811 Rimbp2Q80U40 1072 aa12.65□□□□□ -0.38
Gm28643-201ENSMUST00000188811 Fam71e1A1L3C1 212 aa12.62□□□□□ -0.39
Gm28643-201ENSMUST00000188811 1700123L14RikQ3V2K7 440 aa12.61□□□□□ -0.39
Gm28643-201ENSMUST00000188811 Nlrp6Q91WS2 869 aa12.31□□□□□ -0.44
Gm28643-201ENSMUST00000188811 Akt1s1Q9D1F4 257 aa12.27□□□□□ -0.45
Gm28643-201ENSMUST00000188811 Cdca7Q9D0M2 382 aa12.25□□□□□ -0.45
Gm28643-201ENSMUST00000188811 Bach1P97302 739 aa12.2□□□□□ -0.46
Gm28643-201ENSMUST00000188811 Pde4cQ3UEI1 686 aa12.18□□□□□ -0.46
Gm28643-201ENSMUST00000188811 Slc34a2Q9DBP0 697 aa12.18□□□□□ -0.46
Gm28643-201ENSMUST00000188811 AcrbpQ3V140 540 aa12.17□□□□□ -0.46
Gm28643-201ENSMUST00000188811 ArsiQ32KI9 573 aa12.07□□□□□ -0.48
Gm28643-201ENSMUST00000188811 C1qtnf12Q8R2Z0 308 aa12.01□□□□□ -0.49
Gm28643-201ENSMUST00000188811 Sox12Q04890 314 aa11.97□□□□□ -0.49
Gm28643-201ENSMUST00000188811 WdpcpQ8C456 722 aa11.92□□□□□ -0.5
Gm28643-201ENSMUST00000188811 Rtn4Q99P72 1162 aaKnown RBP11.91□□□□□ -0.5
Gm28643-201ENSMUST00000188811 Ehmt2Q9Z148 1263 aaKnown RBP11.86□□□□□ -0.51
Gm28643-201ENSMUST00000188811 Prm3Q62100 101 aa11.83□□□□□ -0.52
Gm28643-201ENSMUST00000188811 Tshz2Q68FE9 1030 aa11.83□□□□□ -0.52
Gm28643-201ENSMUST00000188811 Riok3Q9DBU3 519 aaKnown RBP11.83□□□□□ -0.52
Gm28643-201ENSMUST00000188811 Npm2Q80W85 207 aa11.79□□□□□ -0.52
Gm28643-201ENSMUST00000188811 MyclP10166 368 aa11.74□□□□□ -0.53
Gm28643-201ENSMUST00000188811 Styxl1Q9DAR2 321 aa11.64□□□□□ -0.55
Gm28643-201ENSMUST00000188811 Ms4a5Q810P8 197 aa11.63□□□□□ -0.55
Gm28643-201ENSMUST00000188811 Trim41Q5NCC3 630 aa11.57□□□□□ -0.56
Gm28643-201ENSMUST00000188811 G430095P16RikE9Q913 147 aa11.43□□□□□ -0.58
Gm28643-201ENSMUST00000188811 Ecm2Q5FW85 670 aa11.4□□□□□ -0.58
Gm28643-201ENSMUST00000188811 Ifnlr1Q8CGK5 535 aa11.36□□□□□ -0.59
Gm28643-201ENSMUST00000188811 Zbtb7aO88939 569 aaKnown RBP11.3□□□□□ -0.6
Gm28643-201ENSMUST00000188811 Prdm10Q3UTQ7 1184 aa11.28□□□□□ -0.6
Gm28643-201ENSMUST00000188811 Egfem1Q8C088 590 aa11.26□□□□□ -0.61
Gm28643-201ENSMUST00000188811 Zbtb12Q9Z150 459 aa11.2□□□□□ -0.62
Gm28643-201ENSMUST00000188811 Tcf3P15806 651 aa11.17□□□□□ -0.62
Gm28643-201ENSMUST00000188811 Grwd1Q810D6 446 aaKnown RBP11.14□□□□□ -0.63
Gm28643-201ENSMUST00000188811 Gtpbp6Q3U6U5 514 aa11.09□□□□□ -0.63
Gm28643-201ENSMUST00000188811 Fbln2P37889 1221 aa11.08□□□□□ -0.64
Gm28643-201ENSMUST00000188811 MpndQ3TV65 487 aa11.08□□□□□ -0.64
Gm28643-201ENSMUST00000188811 Rnf216P58283 853 aa11.07□□□□□ -0.64
Gm28643-201ENSMUST00000188811 Npm3Q9CPP0 175 aaKnown RBP11.07□□□□□ -0.64
Gm28643-201ENSMUST00000188811 Abcb7Q61102 752 aaKnown RBP11.05□□□□□ -0.64
Gm28643-201ENSMUST00000188811 Ppp1r37Q8BKR5 712 aa11□□□□□ -0.65
Gm28643-201ENSMUST00000188811 Nkx1-1G3UXB3 402 aa10.89□□□□□ -0.67
Gm28643-201ENSMUST00000188811 Znf704Q9ERQ3 566 aa10.88□□□□□ -0.67
Gm28643-201ENSMUST00000188811 Slc4a5E9Q3M5 1116 aa10.83□□□□□ -0.68
Gm28643-201ENSMUST00000188811 GapdhsQ64467 440 aa10.83□□□□□ -0.68
Gm28643-201ENSMUST00000188811 Skida1Q80YR3 822 aa10.83□□□□□ -0.68
Gm28643-201ENSMUST00000188811 CatipB9EKE5 520 aa10.81□□□□□ -0.68
Gm28643-201ENSMUST00000188811 Ppp6r1Q7TSI3 856 aa10.7□□□□□ -0.7
Gm28643-201ENSMUST00000188811 Lrrc43Q3V0L5 667 aa10.69□□□□□ -0.7
Gm28643-201ENSMUST00000188811 Jarid2Q62315 1234 aa10.63□□□□□ -0.71
Gm28643-201ENSMUST00000188811 Prdm16A2A935 1275 aa10.61□□□□□ -0.71
Gm28643-201ENSMUST00000188811 Spock2Q9ER58 423 aa10.6□□□□□ -0.71
Gm28643-201ENSMUST00000188811 MycnP03966 462 aaKnown RBP10.54□□□□□ -0.72
Gm28643-201ENSMUST00000188811 Taok2Q6ZQ29 1240 aa10.49□□□□□ -0.73
Gm28643-201ENSMUST00000188811 Zbtb22Q9Z0G7 638 aa10.47□□□□□ -0.73
Gm28643-201ENSMUST00000188811 Slc4a2P13808 1237 aaKnown RBP10.42□□□□□ -0.74
Gm28643-201ENSMUST00000188811 Repin1Q5U4E2 545 aa10.42□□□□□ -0.74
Gm28643-201ENSMUST00000188811 Sra1Q80VJ2 232 aa10.42□□□□□ -0.74
Gm28643-201ENSMUST00000188811 Pitpnm1O35954 1243 aa10.41□□□□□ -0.74
Gm28643-201ENSMUST00000188811 Ferd3lQ923Z4 168 aa10.41□□□□□ -0.74
Gm28643-201ENSMUST00000188811 Fam117bQ3U3E2 584 aa10.4□□□□□ -0.74
Gm28643-201ENSMUST00000188811 Skap1Q3UUV5 355 aa10.4□□□□□ -0.74
Gm28643-201ENSMUST00000188811 Arid3aQ62431 601 aa10.4□□□□□ -0.74
Gm28643-201ENSMUST00000188811 Cadps2Q8BYR5 1297 aa10.38□□□□□ -0.75
Gm28643-201ENSMUST00000188811 Pde4dQ01063 747 aa10.37□□□□□ -0.75
Gm28643-201ENSMUST00000188811 Trim35Q8C006 501 aa10.35□□□□□ -0.75
Gm28643-201ENSMUST00000188811 TimelessQ9R1X4 1197 aa10.35□□□□□ -0.75
Gm28643-201ENSMUST00000188811 Hdac5Q9Z2V6 1113 aa10.34□□□□□ -0.75
Gm28643-201ENSMUST00000188811 Hnrnpul2Q00PI9 745 aaKnown RBP10.33□□□□□ -0.76
Gm28643-201ENSMUST00000188811 Nyap1Q6PFX7 833 aa10.32□□□□□ -0.76
Gm28643-201ENSMUST00000188811 Zbtb7bQ64321 544 aa10.23□□□□□ -0.77
Gm28643-201ENSMUST00000188811 Slc24a1Q91WD8 1130 aa10.23□□□□□ -0.77
Gm28643-201ENSMUST00000188811 Mkrn3Q60764 544 aa10.2□□□□□ -0.78
Gm28643-201ENSMUST00000188811 Rgl2Q61193 778 aa10.19□□□□□ -0.78
Gm28643-201ENSMUST00000188811 Noa1Q9JJG9 693 aaKnown RBP10.18□□□□□ -0.78
Gm28643-201ENSMUST00000188811 Chrm1P12657 460 aa10.17□□□□□ -0.78
Gm28643-201ENSMUST00000188811 Kank3Q9Z1P7 791 aa10.16□□□□□ -0.78
Gm28643-201ENSMUST00000188811 Gm13697A2AK42 830 aa10.15□□□□□ -0.78
Gm28643-201ENSMUST00000188811 Pdap1Q3UHX2 181 aaKnown RBP10.14□□□□□ -0.79
Gm28643-201ENSMUST00000188811 Zeb1Q64318 1117 aa10.14□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms