RNA–Protein interactions for RNA: ENSMUST00000188443.1

Gm28486-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28486, Length 621 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28486-201ENSMUST00000188443 Chic1Q8CBW7 227 aa27.28■■□□□ 1.96
Gm28486-201ENSMUST00000188443 Mapk8ip2Q9ERE9 830 aa26.94■■□□□ 1.9
Gm28486-201ENSMUST00000188443 Phf23Q8BSN5 401 aa24.54■■□□□ 1.52
Gm28486-201ENSMUST00000188443 Plppr3Q7TPB0 716 aa23.4■■□□□ 1.34
Gm28486-201ENSMUST00000188443 Gab3Q8BSM5 595 aa23.36■■□□□ 1.33
Gm28486-201ENSMUST00000188443 Senp3Q9EP97 568 aaKnown RBP22.36■■□□□ 1.17
Gm28486-201ENSMUST00000188443 Kcna4Q61423 654 aa21.19■□□□□ 0.98
Gm28486-201ENSMUST00000188443 Fam163aQ8CAA5 168 aa20.11■□□□□ 0.81
Gm28486-201ENSMUST00000188443 Hoxd11P23813 323 aa19.79■□□□□ 0.76
Gm28486-201ENSMUST00000188443 Trap1aP19473 224 aa19.72■□□□□ 0.75
Gm28486-201ENSMUST00000188443 Znf219Q6IQX8 726 aa19.06■□□□□ 0.64
Gm28486-201ENSMUST00000188443 Dmrt2Q8BG36 561 aa18.88■□□□□ 0.61
Gm28486-201ENSMUST00000188443 Chrna2Q91X60 512 aa18.72■□□□□ 0.59
Gm28486-201ENSMUST00000188443 Rsph4aQ8BYM7 716 aa18.58■□□□□ 0.56
Gm28486-201ENSMUST00000188443 ArsiQ32KI9 573 aa18.48■□□□□ 0.55
Gm28486-201ENSMUST00000188443 Rimbp2Q80U40 1072 aa18.38■□□□□ 0.53
Gm28486-201ENSMUST00000188443 Ppargc1bQ8VHJ7 1014 aa18.33■□□□□ 0.52
Gm28486-201ENSMUST00000188443 Atf5O70191 283 aa18.11■□□□□ 0.49
Gm28486-201ENSMUST00000188443 Dnajc5bQ9CQ94 199 aa18.06■□□□□ 0.48
Gm28486-201ENSMUST00000188443 Akt1s1Q9D1F4 257 aa18.05■□□□□ 0.48
Gm28486-201ENSMUST00000188443 Slc4a1apE9PX68 744 aa17.9■□□□□ 0.46
Gm28486-201ENSMUST00000188443 Ppp4r2Q0VGB7 417 aa17.82■□□□□ 0.44
Gm28486-201ENSMUST00000188443 Hs6st3Q9QYK4 470 aa17.82■□□□□ 0.44
Gm28486-201ENSMUST00000188443 Slc34a2Q9DBP0 697 aa17.61■□□□□ 0.41
Gm28486-201ENSMUST00000188443 Bach1P97302 739 aa17.37■□□□□ 0.37
Gm28486-201ENSMUST00000188443 1700123L14RikQ3V2K7 440 aa17.28■□□□□ 0.36
Gm28486-201ENSMUST00000188443 Sox12Q04890 314 aa17.15■□□□□ 0.34
Gm28486-201ENSMUST00000188443 WdpcpQ8C456 722 aa16.83■□□□□ 0.28
Gm28486-201ENSMUST00000188443 Znf704Q9ERQ3 566 aa16.59■□□□□ 0.25
Gm28486-201ENSMUST00000188443 Slc4a5E9Q3M5 1116 aa16.51■□□□□ 0.23
Gm28486-201ENSMUST00000188443 GapdhsQ64467 440 aa16.51■□□□□ 0.23
Gm28486-201ENSMUST00000188443 Egfem1Q8C088 590 aa16.42■□□□□ 0.22
Gm28486-201ENSMUST00000188443 C1qtnf12Q8R2Z0 308 aa16.4■□□□□ 0.22
Gm28486-201ENSMUST00000188443 Zbtb7aO88939 569 aaKnown RBP16.39■□□□□ 0.21
Gm28486-201ENSMUST00000188443 Grwd1Q810D6 446 aaKnown RBP16.34■□□□□ 0.21
Gm28486-201ENSMUST00000188443 Ifnlr1Q8CGK5 535 aa16.34■□□□□ 0.21
Gm28486-201ENSMUST00000188443 G430095P16RikE9Q913 147 aa16.33■□□□□ 0.2
Gm28486-201ENSMUST00000188443 Cdca7Q9D0M2 382 aa16.29■□□□□ 0.2
Gm28486-201ENSMUST00000188443 Nlrp6Q91WS2 869 aa16.17■□□□□ 0.18
Gm28486-201ENSMUST00000188443 Fam71e1A1L3C1 212 aa16.16■□□□□ 0.18
Gm28486-201ENSMUST00000188443 Abcb7Q61102 752 aaKnown RBP16.11■□□□□ 0.17
Gm28486-201ENSMUST00000188443 Ms4a5Q810P8 197 aa16.09■□□□□ 0.17
Gm28486-201ENSMUST00000188443 Riok3Q9DBU3 519 aaKnown RBP15.96■□□□□ 0.15
Gm28486-201ENSMUST00000188443 Rnf216P58283 853 aa15.95■□□□□ 0.14
Gm28486-201ENSMUST00000188443 Zbtb12Q9Z150 459 aa15.94■□□□□ 0.14
Gm28486-201ENSMUST00000188443 Gtpbp6Q3U6U5 514 aa15.85■□□□□ 0.13
Gm28486-201ENSMUST00000188443 Trim41Q5NCC3 630 aa15.81■□□□□ 0.12
Gm28486-201ENSMUST00000188443 Nkx1-1G3UXB3 402 aa15.79■□□□□ 0.12
Gm28486-201ENSMUST00000188443 Npm2Q80W85 207 aa15.79■□□□□ 0.12
Gm28486-201ENSMUST00000188443 AcrbpQ3V140 540 aa15.78■□□□□ 0.12
Gm28486-201ENSMUST00000188443 MyclP10166 368 aa15.76■□□□□ 0.11
Gm28486-201ENSMUST00000188443 Pde4cQ3UEI1 686 aa15.75■□□□□ 0.11
Gm28486-201ENSMUST00000188443 Prm3Q62100 101 aa15.5■□□□□ 0.07
Gm28486-201ENSMUST00000188443 Znf703P0CL69 594 aa15.46■□□□□ 0.07
Gm28486-201ENSMUST00000188443 Fbln2P37889 1221 aa15.44■□□□□ 0.06
Gm28486-201ENSMUST00000188443 Ildr2B5TVM2 661 aa15.4■□□□□ 0.06
Gm28486-201ENSMUST00000188443 Cacnb1Q8R3Z5 597 aa15.39■□□□□ 0.05
Gm28486-201ENSMUST00000188443 Kcnn1Q9EQR3 537 aa15.39■□□□□ 0.05
Gm28486-201ENSMUST00000188443 Styxl1Q9DAR2 321 aa15.38■□□□□ 0.05
Gm28486-201ENSMUST00000188443 Prr29B1ARI9 187 aa15.37■□□□□ 0.05
Gm28486-201ENSMUST00000188443 Ube2uB1AUC4 352 aa15.33■□□□□ 0.04
Gm28486-201ENSMUST00000188443 Npm3Q9CPP0 175 aaKnown RBP15.32■□□□□ 0.04
Gm28486-201ENSMUST00000188443 Tshz2Q68FE9 1030 aa15.26■□□□□ 0.03
Gm28486-201ENSMUST00000188443 Rtn4Q99P72 1162 aaKnown RBP15.26■□□□□ 0.03
Gm28486-201ENSMUST00000188443 MpndQ3TV65 487 aa15.25■□□□□ 0.03
Gm28486-201ENSMUST00000188443 Pitpnm1O35954 1243 aa15.18■□□□□ 0.02
Gm28486-201ENSMUST00000188443 Trim35Q8C006 501 aa15.09■□□□□ 0.01
Gm28486-201ENSMUST00000188443 Pip4p2Q9CZX7 257 aa15.09■□□□□ 0.01
Gm28486-201ENSMUST00000188443 Skida1Q80YR3 822 aa15.08■□□□□ 0
Gm28486-201ENSMUST00000188443 Kank3Q9Z1P7 791 aa15.06■□□□□ 0
Gm28486-201ENSMUST00000188443 Clcn6O35454 870 aa14.91□□□□□ -0.02
Gm28486-201ENSMUST00000188443 Ppp1r37Q8BKR5 712 aa14.81□□□□□ -0.04
Gm28486-201ENSMUST00000188443 Tcf3P15806 651 aa14.77□□□□□ -0.05
Gm28486-201ENSMUST00000188443 Cadps2Q8BYR5 1297 aa14.72□□□□□ -0.05
Gm28486-201ENSMUST00000188443 Lrrc43Q3V0L5 667 aa14.71□□□□□ -0.05
Gm28486-201ENSMUST00000188443 Jarid2Q62315 1234 aa14.69□□□□□ -0.06
Gm28486-201ENSMUST00000188443 Nyap1Q6PFX7 833 aa14.66□□□□□ -0.06
Gm28486-201ENSMUST00000188443 SnphQ80U23 495 aa14.42□□□□□ -0.1
Gm28486-201ENSMUST00000188443 Dok7Q18PE0 504 aa14.41□□□□□ -0.1
Gm28486-201ENSMUST00000188443 Sra1Q80VJ2 232 aa14.36□□□□□ -0.11
Gm28486-201ENSMUST00000188443 Ehmt2Q9Z148 1263 aaKnown RBP14.32□□□□□ -0.12
Gm28486-201ENSMUST00000188443 Hnrnpul2Q00PI9 745 aaKnown RBP14.3□□□□□ -0.12
Gm28486-201ENSMUST00000188443 Foxp4Q9DBY0 795 aaKnown RBP14.27□□□□□ -0.13
Gm28486-201ENSMUST00000188443 Ecm2Q5FW85 670 aa14.25□□□□□ -0.13
Gm28486-201ENSMUST00000188443 ArntlQ9WTL8 632 aa14.15□□□□□ -0.14
Gm28486-201ENSMUST00000188443 MycnP03966 462 aaKnown RBP14.14□□□□□ -0.15
Gm28486-201ENSMUST00000188443 Pde4dQ01063 747 aa14.1□□□□□ -0.15
Gm28486-201ENSMUST00000188443 Repin1Q5U4E2 545 aa14.07□□□□□ -0.16
Gm28486-201ENSMUST00000188443 CrebzfQ91ZR3 358 aa14.06□□□□□ -0.16
Gm28486-201ENSMUST00000188443 Hdac5Q9Z2V6 1113 aa14.06□□□□□ -0.16
Gm28486-201ENSMUST00000188443 PygbQ8CI94 843 aaKnown RBP14.05□□□□□ -0.16
Gm28486-201ENSMUST00000188443 Fam117bQ3U3E2 584 aa14.02□□□□□ -0.17
Gm28486-201ENSMUST00000188443 Zranb1Q7M760 708 aa14□□□□□ -0.17
Gm28486-201ENSMUST00000188443 Zbtb7bQ64321 544 aa13.99□□□□□ -0.17
Gm28486-201ENSMUST00000188443 Gjc2Q8BQU6 440 aa13.93□□□□□ -0.18
Gm28486-201ENSMUST00000188443 Atad2Q8CDM1 1040 aa13.93□□□□□ -0.18
Gm28486-201ENSMUST00000188443 Map3k10Q66L42 940 aa13.92□□□□□ -0.18
Gm28486-201ENSMUST00000188443 Gm13697A2AK42 830 aa13.87□□□□□ -0.19
Gm28486-201ENSMUST00000188443 Spock2Q9ER58 423 aa13.87□□□□□ -0.19
Gm28486-201ENSMUST00000188443 Pdap1Q3UHX2 181 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms