RNA–Protein interactions for RNA: ENSMUST00000185287.1

Gm28298-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28298, Length 622 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28298-201ENSMUST00000185287 Chic1Q8CBW7 227 aa26.87■■□□□ 1.89
Gm28298-201ENSMUST00000185287 Mapk8ip2Q9ERE9 830 aa26.25■■□□□ 1.79
Gm28298-201ENSMUST00000185287 Phf23Q8BSN5 401 aa24.09■■□□□ 1.45
Gm28298-201ENSMUST00000185287 Plppr3Q7TPB0 716 aa23.2■■□□□ 1.3
Gm28298-201ENSMUST00000185287 Gab3Q8BSM5 595 aa23.07■■□□□ 1.28
Gm28298-201ENSMUST00000185287 Senp3Q9EP97 568 aaKnown RBP22.06■■□□□ 1.12
Gm28298-201ENSMUST00000185287 Kcna4Q61423 654 aa21.07■□□□□ 0.96
Gm28298-201ENSMUST00000185287 Trap1aP19473 224 aa19.51■□□□□ 0.71
Gm28298-201ENSMUST00000185287 Fam163aQ8CAA5 168 aa19.51■□□□□ 0.71
Gm28298-201ENSMUST00000185287 Hoxd11P23813 323 aa19.5■□□□□ 0.71
Gm28298-201ENSMUST00000185287 Dmrt2Q8BG36 561 aa18.82■□□□□ 0.6
Gm28298-201ENSMUST00000185287 Znf219Q6IQX8 726 aa18.77■□□□□ 0.6
Gm28298-201ENSMUST00000185287 Chrna2Q91X60 512 aa18.49■□□□□ 0.55
Gm28298-201ENSMUST00000185287 Rsph4aQ8BYM7 716 aa18.34■□□□□ 0.53
Gm28298-201ENSMUST00000185287 Ppargc1bQ8VHJ7 1014 aa18.34■□□□□ 0.53
Gm28298-201ENSMUST00000185287 Rimbp2Q80U40 1072 aa18.08■□□□□ 0.48
Gm28298-201ENSMUST00000185287 ArsiQ32KI9 573 aa18.04■□□□□ 0.48
Gm28298-201ENSMUST00000185287 Slc4a1apE9PX68 744 aa18.01■□□□□ 0.47
Gm28298-201ENSMUST00000185287 Dnajc5bQ9CQ94 199 aa17.96■□□□□ 0.47
Gm28298-201ENSMUST00000185287 Atf5O70191 283 aa17.88■□□□□ 0.45
Gm28298-201ENSMUST00000185287 Akt1s1Q9D1F4 257 aa17.75■□□□□ 0.43
Gm28298-201ENSMUST00000185287 Hs6st3Q9QYK4 470 aa17.75■□□□□ 0.43
Gm28298-201ENSMUST00000185287 Ppp4r2Q0VGB7 417 aa17.74■□□□□ 0.43
Gm28298-201ENSMUST00000185287 Slc34a2Q9DBP0 697 aa17.38■□□□□ 0.37
Gm28298-201ENSMUST00000185287 1700123L14RikQ3V2K7 440 aa17.22■□□□□ 0.35
Gm28298-201ENSMUST00000185287 Bach1P97302 739 aa17.13■□□□□ 0.33
Gm28298-201ENSMUST00000185287 Sox12Q04890 314 aa17.01■□□□□ 0.31
Gm28298-201ENSMUST00000185287 WdpcpQ8C456 722 aa16.67■□□□□ 0.26
Gm28298-201ENSMUST00000185287 C1qtnf12Q8R2Z0 308 aa16.39■□□□□ 0.21
Gm28298-201ENSMUST00000185287 Fam71e1A1L3C1 212 aa16.38■□□□□ 0.21
Gm28298-201ENSMUST00000185287 Cdca7Q9D0M2 382 aa16.36■□□□□ 0.21
Gm28298-201ENSMUST00000185287 Nlrp6Q91WS2 869 aa16.31■□□□□ 0.2
Gm28298-201ENSMUST00000185287 Ifnlr1Q8CGK5 535 aa16.23■□□□□ 0.19
Gm28298-201ENSMUST00000185287 Znf704Q9ERQ3 566 aa16.2■□□□□ 0.18
Gm28298-201ENSMUST00000185287 G430095P16RikE9Q913 147 aa16.16■□□□□ 0.18
Gm28298-201ENSMUST00000185287 Egfem1Q8C088 590 aa16.15■□□□□ 0.18
Gm28298-201ENSMUST00000185287 Slc4a5E9Q3M5 1116 aa16.13■□□□□ 0.17
Gm28298-201ENSMUST00000185287 Zbtb7aO88939 569 aaKnown RBP16.12■□□□□ 0.17
Gm28298-201ENSMUST00000185287 Grwd1Q810D6 446 aaKnown RBP16.1■□□□□ 0.17
Gm28298-201ENSMUST00000185287 Riok3Q9DBU3 519 aaKnown RBP16.01■□□□□ 0.15
Gm28298-201ENSMUST00000185287 AcrbpQ3V140 540 aa15.98■□□□□ 0.15
Gm28298-201ENSMUST00000185287 Npm2Q80W85 207 aa15.95■□□□□ 0.14
Gm28298-201ENSMUST00000185287 Ube2uB1AUC4 352 aa15.93■□□□□ 0.14
Gm28298-201ENSMUST00000185287 Ms4a5Q810P8 197 aa15.93■□□□□ 0.14
Gm28298-201ENSMUST00000185287 Pde4cQ3UEI1 686 aa15.91■□□□□ 0.14
Gm28298-201ENSMUST00000185287 Trim41Q5NCC3 630 aa15.91■□□□□ 0.14
Gm28298-201ENSMUST00000185287 Zbtb12Q9Z150 459 aa15.88■□□□□ 0.13
Gm28298-201ENSMUST00000185287 Rnf216P58283 853 aa15.85■□□□□ 0.13
Gm28298-201ENSMUST00000185287 MyclP10166 368 aa15.84■□□□□ 0.13
Gm28298-201ENSMUST00000185287 Abcb7Q61102 752 aaKnown RBP15.8■□□□□ 0.12
Gm28298-201ENSMUST00000185287 GapdhsQ64467 440 aa15.75■□□□□ 0.11
Gm28298-201ENSMUST00000185287 Prm3Q62100 101 aa15.72■□□□□ 0.11
Gm28298-201ENSMUST00000185287 Gtpbp6Q3U6U5 514 aa15.68■□□□□ 0.1
Gm28298-201ENSMUST00000185287 Rtn4Q99P72 1162 aaKnown RBP15.56■□□□□ 0.08
Gm28298-201ENSMUST00000185287 Nkx1-1G3UXB3 402 aa15.55■□□□□ 0.08
Gm28298-201ENSMUST00000185287 Styxl1Q9DAR2 321 aa15.5■□□□□ 0.07
Gm28298-201ENSMUST00000185287 Tshz2Q68FE9 1030 aa15.4■□□□□ 0.06
Gm28298-201ENSMUST00000185287 Fbln2P37889 1221 aa15.36■□□□□ 0.05
Gm28298-201ENSMUST00000185287 Npm3Q9CPP0 175 aaKnown RBP15.24■□□□□ 0.03
Gm28298-201ENSMUST00000185287 MpndQ3TV65 487 aa15.2■□□□□ 0.02
Gm28298-201ENSMUST00000185287 Kcnn1Q9EQR3 537 aa15.09■□□□□ 0.01
Gm28298-201ENSMUST00000185287 Skida1Q80YR3 822 aa15.08■□□□□ 0
Gm28298-201ENSMUST00000185287 Znf703P0CL69 594 aa15.06■□□□□ 0
Gm28298-201ENSMUST00000185287 Ildr2B5TVM2 661 aa15.01□□□□□ -0.01
Gm28298-201ENSMUST00000185287 Prr29B1ARI9 187 aa15□□□□□ -0.01
Gm28298-201ENSMUST00000185287 Pitpnm1O35954 1243 aa14.93□□□□□ -0.02
Gm28298-201ENSMUST00000185287 Tcf3P15806 651 aa14.88□□□□□ -0.03
Gm28298-201ENSMUST00000185287 Cacnb1Q8R3Z5 597 aa14.88□□□□□ -0.03
Gm28298-201ENSMUST00000185287 Trim35Q8C006 501 aa14.81□□□□□ -0.04
Gm28298-201ENSMUST00000185287 Ppp1r37Q8BKR5 712 aa14.79□□□□□ -0.04
Gm28298-201ENSMUST00000185287 Kank3Q9Z1P7 791 aa14.78□□□□□ -0.04
Gm28298-201ENSMUST00000185287 Clcn6O35454 870 aa14.76□□□□□ -0.05
Gm28298-201ENSMUST00000185287 Pip4p2Q9CZX7 257 aa14.75□□□□□ -0.05
Gm28298-201ENSMUST00000185287 Ehmt2Q9Z148 1263 aaKnown RBP14.7□□□□□ -0.06
Gm28298-201ENSMUST00000185287 Lrrc43Q3V0L5 667 aa14.69□□□□□ -0.06
Gm28298-201ENSMUST00000185287 Jarid2Q62315 1234 aa14.61□□□□□ -0.07
Gm28298-201ENSMUST00000185287 Cadps2Q8BYR5 1297 aa14.61□□□□□ -0.07
Gm28298-201ENSMUST00000185287 Nyap1Q6PFX7 833 aa14.54□□□□□ -0.08
Gm28298-201ENSMUST00000185287 Ecm2Q5FW85 670 aa14.53□□□□□ -0.08
Gm28298-201ENSMUST00000185287 Hnrnpul2Q00PI9 745 aaKnown RBP14.37□□□□□ -0.11
Gm28298-201ENSMUST00000185287 Sra1Q80VJ2 232 aa14.31□□□□□ -0.12
Gm28298-201ENSMUST00000185287 SnphQ80U23 495 aa14.29□□□□□ -0.12
Gm28298-201ENSMUST00000185287 MycnP03966 462 aaKnown RBP14.24□□□□□ -0.13
Gm28298-201ENSMUST00000185287 Dok7Q18PE0 504 aa14.23□□□□□ -0.13
Gm28298-201ENSMUST00000185287 Prdm10Q3UTQ7 1184 aa14.15□□□□□ -0.14
Gm28298-201ENSMUST00000185287 Hdac5Q9Z2V6 1113 aa14.11□□□□□ -0.15
Gm28298-201ENSMUST00000185287 Pde4dQ01063 747 aa14.05□□□□□ -0.16
Gm28298-201ENSMUST00000185287 Repin1Q5U4E2 545 aa14.03□□□□□ -0.16
Gm28298-201ENSMUST00000185287 Spock2Q9ER58 423 aa14.03□□□□□ -0.16
Gm28298-201ENSMUST00000185287 Fam117bQ3U3E2 584 aa14.02□□□□□ -0.17
Gm28298-201ENSMUST00000185287 Zbtb7bQ64321 544 aa13.97□□□□□ -0.17
Gm28298-201ENSMUST00000185287 PygbQ8CI94 843 aaKnown RBP13.95□□□□□ -0.18
Gm28298-201ENSMUST00000185287 Foxp4Q9DBY0 795 aaKnown RBP13.94□□□□□ -0.18
Gm28298-201ENSMUST00000185287 CrebzfQ91ZR3 358 aa13.92□□□□□ -0.18
Gm28298-201ENSMUST00000185287 Gm13697A2AK42 830 aa13.91□□□□□ -0.18
Gm28298-201ENSMUST00000185287 Ppp6r1Q7TSI3 856 aa13.91□□□□□ -0.18
Gm28298-201ENSMUST00000185287 Pdap1Q3UHX2 181 aaKnown RBP13.88□□□□□ -0.19
Gm28298-201ENSMUST00000185287 Atad2Q8CDM1 1040 aa13.88□□□□□ -0.19
Gm28298-201ENSMUST00000185287 Ferd3lQ923Z4 168 aa13.8□□□□□ -0.2
Gm28298-201ENSMUST00000185287 ArntlQ9WTL8 632 aa13.79□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms