RNA–Protein interactions for RNA: ENSMUST00000181542.1

Hmgb1-ps8-201, mousemouse

BASIC

Gene Hmgb1-ps8, Length 626 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps8-201ENSMUST00000181542 Mapk8ip2Q9ERE9 830 aa15□□□□□ -0.01
Hmgb1-ps8-201ENSMUST00000181542 Chic1Q8CBW7 227 aa14.75□□□□□ -0.05
Hmgb1-ps8-201ENSMUST00000181542 Phf23Q8BSN5 401 aa13.24□□□□□ -0.29
Hmgb1-ps8-201ENSMUST00000181542 Gab3Q8BSM5 595 aa12.47□□□□□ -0.41
Hmgb1-ps8-201ENSMUST00000181542 Plppr3Q7TPB0 716 aa12.29□□□□□ -0.44
Hmgb1-ps8-201ENSMUST00000181542 Senp3Q9EP97 568 aaKnown RBP11.91□□□□□ -0.5
Hmgb1-ps8-201ENSMUST00000181542 Fam163aQ8CAA5 168 aa11.36□□□□□ -0.59
Hmgb1-ps8-201ENSMUST00000181542 Kcna4Q61423 654 aa10.86□□□□□ -0.67
Hmgb1-ps8-201ENSMUST00000181542 Hoxd11P23813 323 aa10.66□□□□□ -0.7
Hmgb1-ps8-201ENSMUST00000181542 Trap1aP19473 224 aa10.48□□□□□ -0.73
Hmgb1-ps8-201ENSMUST00000181542 Znf219Q6IQX8 726 aa10.35□□□□□ -0.75
Hmgb1-ps8-201ENSMUST00000181542 ArsiQ32KI9 573 aa10.34□□□□□ -0.75
Hmgb1-ps8-201ENSMUST00000181542 Chrna2Q91X60 512 aa10.01□□□□□ -0.81
Hmgb1-ps8-201ENSMUST00000181542 Rsph4aQ8BYM7 716 aa9.97□□□□□ -0.81
Hmgb1-ps8-201ENSMUST00000181542 Slc34a2Q9DBP0 697 aa9.93□□□□□ -0.82
Hmgb1-ps8-201ENSMUST00000181542 GapdhsQ64467 440 aa9.91□□□□□ -0.82
Hmgb1-ps8-201ENSMUST00000181542 Rimbp2Q80U40 1072 aa9.88□□□□□ -0.83
Hmgb1-ps8-201ENSMUST00000181542 Dnajc5bQ9CQ94 199 aa9.84□□□□□ -0.83
Hmgb1-ps8-201ENSMUST00000181542 Akt1s1Q9D1F4 257 aa9.82□□□□□ -0.84
Hmgb1-ps8-201ENSMUST00000181542 Dmrt2Q8BG36 561 aa9.64□□□□□ -0.87
Hmgb1-ps8-201ENSMUST00000181542 Gm35339A0A140LHH9 1649 aa9.62□□□□□ -0.87
Hmgb1-ps8-201ENSMUST00000181542 NischQ80TM9 1593 aa9.62□□□□□ -0.87
Hmgb1-ps8-201ENSMUST00000181542 Atf5O70191 283 aa9.42□□□□□ -0.9
Hmgb1-ps8-201ENSMUST00000181542 Abcc9P70170 1546 aa9.31□□□□□ -0.92
Hmgb1-ps8-201ENSMUST00000181542 Abcc8B2RUS7 1588 aa9.25□□□□□ -0.93
Hmgb1-ps8-201ENSMUST00000181542 Znf704Q9ERQ3 566 aa9.25□□□□□ -0.93
Hmgb1-ps8-201ENSMUST00000181542 Hs6st3Q9QYK4 470 aa9.25□□□□□ -0.93
Hmgb1-ps8-201ENSMUST00000181542 Slc4a5E9Q3M5 1116 aa9.22□□□□□ -0.93
Hmgb1-ps8-201ENSMUST00000181542 Ppp4r2Q0VGB7 417 aa9.22□□□□□ -0.93
Hmgb1-ps8-201ENSMUST00000181542 Bach1P97302 739 aa9.18□□□□□ -0.94
Hmgb1-ps8-201ENSMUST00000181542 Sox12Q04890 314 aa9.11□□□□□ -0.95
Hmgb1-ps8-201ENSMUST00000181542 Ppargc1bQ8VHJ7 1014 aa9.05□□□□□ -0.96
Hmgb1-ps8-201ENSMUST00000181542 Slc4a1apE9PX68 744 aa8.93□□□□□ -0.98
Hmgb1-ps8-201ENSMUST00000181542 Ube2uB1AUC4 352 aa8.83□□□□□ -1
Hmgb1-ps8-201ENSMUST00000181542 Egfem1Q8C088 590 aa8.83□□□□□ -1
Hmgb1-ps8-201ENSMUST00000181542 Cacnb1Q8R3Z5 597 aa8.82□□□□□ -1
Hmgb1-ps8-201ENSMUST00000181542 Grwd1Q810D6 446 aaKnown RBP8.81□□□□□ -1
Hmgb1-ps8-201ENSMUST00000181542 WdpcpQ8C456 722 aa8.81□□□□□ -1
Hmgb1-ps8-201ENSMUST00000181542 1700123L14RikQ3V2K7 440 aa8.8□□□□□ -1
Hmgb1-ps8-201ENSMUST00000181542 Zbtb7aO88939 569 aaKnown RBP8.79□□□□□ -1
Hmgb1-ps8-201ENSMUST00000181542 ScribQ80U72 1612 aa8.72□□□□□ -1.01
Hmgb1-ps8-201ENSMUST00000181542 Znf703P0CL69 594 aa8.69□□□□□ -1.02
Hmgb1-ps8-201ENSMUST00000181542 Dcaf1Q80TR8 1506 aa8.66□□□□□ -1.02
Hmgb1-ps8-201ENSMUST00000181542 Abcb7Q61102 752 aaKnown RBP8.66□□□□□ -1.02
Hmgb1-ps8-201ENSMUST00000181542 Ildr2B5TVM2 661 aa8.65□□□□□ -1.02
Hmgb1-ps8-201ENSMUST00000181542 Ifnlr1Q8CGK5 535 aa8.65□□□□□ -1.02
Hmgb1-ps8-201ENSMUST00000181542 NacadQ5SWP3 1504 aa8.64□□□□□ -1.03
Hmgb1-ps8-201ENSMUST00000181542 G430095P16RikE9Q913 147 aa8.62□□□□□ -1.03
Hmgb1-ps8-201ENSMUST00000181542 Prr29B1ARI9 187 aa8.56□□□□□ -1.04
Hmgb1-ps8-201ENSMUST00000181542 Kdm5dQ62240 1548 aa8.54□□□□□ -1.04
Hmgb1-ps8-201ENSMUST00000181542 Kcnn1Q9EQR3 537 aa8.51□□□□□ -1.05
Hmgb1-ps8-201ENSMUST00000181542 Rnf216P58283 853 aa8.5□□□□□ -1.05
Hmgb1-ps8-201ENSMUST00000181542 Rhox8Q6VSS7 320 aa8.5□□□□□ -1.05
Hmgb1-ps8-201ENSMUST00000181542 Nkx1-1G3UXB3 402 aa8.45□□□□□ -1.06
Hmgb1-ps8-201ENSMUST00000181542 Sycp2Q9CUU3 1500 aa8.43□□□□□ -1.06
Hmgb1-ps8-201ENSMUST00000181542 Zbtb12Q9Z150 459 aa8.4□□□□□ -1.06
Hmgb1-ps8-201ENSMUST00000181542 Gtpbp6Q3U6U5 514 aa8.39□□□□□ -1.07
Hmgb1-ps8-201ENSMUST00000181542 C1qtnf12Q8R2Z0 308 aa8.38□□□□□ -1.07
Hmgb1-ps8-201ENSMUST00000181542 Crybg2B7ZCC2 1516 aa8.37□□□□□ -1.07
Hmgb1-ps8-201ENSMUST00000181542 Rb1cc1Q9ESK9 1588 aa8.35□□□□□ -1.07
Hmgb1-ps8-201ENSMUST00000181542 Cdca7Q9D0M2 382 aa8.33□□□□□ -1.08
Hmgb1-ps8-201ENSMUST00000181542 Pip4p2Q9CZX7 257 aa8.31□□□□□ -1.08
Hmgb1-ps8-201ENSMUST00000181542 Ccdc180J3QNE4 1664 aa8.3□□□□□ -1.08
Hmgb1-ps8-201ENSMUST00000181542 Ms4a5Q810P8 197 aa8.3□□□□□ -1.08
Hmgb1-ps8-201ENSMUST00000181542 Baz1aO88379 1555 aa8.29□□□□□ -1.08
Hmgb1-ps8-201ENSMUST00000181542 Kank3Q9Z1P7 791 aa8.23□□□□□ -1.09
Hmgb1-ps8-201ENSMUST00000181542 BicraF8VPZ9 1578 aa8.2□□□□□ -1.1
Hmgb1-ps8-201ENSMUST00000181542 Pitpnm1O35954 1243 aa8.18□□□□□ -1.1
Hmgb1-ps8-201ENSMUST00000181542 Clcn6O35454 870 aa8.15□□□□□ -1.1
Hmgb1-ps8-201ENSMUST00000181542 Zcchc6Q5BLK4 1491 aaKnown RBP8.14□□□□□ -1.11
Hmgb1-ps8-201ENSMUST00000181542 Trim35Q8C006 501 aa8.14□□□□□ -1.11
Hmgb1-ps8-201ENSMUST00000181542 Fam71e1A1L3C1 212 aa8.12□□□□□ -1.11
Hmgb1-ps8-201ENSMUST00000181542 Pds5bQ4VA53 1446 aaKnown RBP8.12□□□□□ -1.11
Hmgb1-ps8-201ENSMUST00000181542 Trim41Q5NCC3 630 aa8.04□□□□□ -1.12
Hmgb1-ps8-201ENSMUST00000181542 Riok3Q9DBU3 519 aaKnown RBP8.04□□□□□ -1.12
Hmgb1-ps8-201ENSMUST00000181542 Smarca2Q6DIC0 1577 aa8.04□□□□□ -1.12
Hmgb1-ps8-201ENSMUST00000181542 Atad2bE9Q166 1460 aaKnown RBP8.03□□□□□ -1.12
Hmgb1-ps8-201ENSMUST00000181542 Fbln2P37889 1221 aa7.98□□□□□ -1.13
Hmgb1-ps8-201ENSMUST00000181542 Ehmt2Q9Z148 1263 aaKnown RBP7.98□□□□□ -1.13
Hmgb1-ps8-201ENSMUST00000181542 Smarca4Q3TKT4 1613 aaKnown RBP7.95□□□□□ -1.14
Hmgb1-ps8-201ENSMUST00000181542 Rtl1Q7M732 1744 aa7.94□□□□□ -1.14
Hmgb1-ps8-201ENSMUST00000181542 Brd4Q9ESU6 1400 aaKnown RBP7.94□□□□□ -1.14
Hmgb1-ps8-201ENSMUST00000181542 Cecr2E9Q2Z1 1453 aa7.94□□□□□ -1.14
Hmgb1-ps8-201ENSMUST00000181542 Nlrp6Q91WS2 869 aa7.92□□□□□ -1.14
Hmgb1-ps8-201ENSMUST00000181542 Ccdc136Q3TVA9 1136 aa7.91□□□□□ -1.14
Hmgb1-ps8-201ENSMUST00000181542 Foxp4Q9DBY0 795 aaKnown RBP7.91□□□□□ -1.14
Hmgb1-ps8-201ENSMUST00000181542 Npm3Q9CPP0 175 aaKnown RBP7.9□□□□□ -1.14
Hmgb1-ps8-201ENSMUST00000181542 Ercc6F8VPZ5 1481 aa7.89□□□□□ -1.15
Hmgb1-ps8-201ENSMUST00000181542 AcrbpQ3V140 540 aa7.89□□□□□ -1.15
Hmgb1-ps8-201ENSMUST00000181542 MyclP10166 368 aa7.87□□□□□ -1.15
Hmgb1-ps8-201ENSMUST00000181542 ArntlQ9WTL8 632 aa7.87□□□□□ -1.15
Hmgb1-ps8-201ENSMUST00000181542 Iqgap2Q3UQ44 1575 aa7.87□□□□□ -1.15
Hmgb1-ps8-201ENSMUST00000181542 Npm2Q80W85 207 aa7.86□□□□□ -1.15
Hmgb1-ps8-201ENSMUST00000181542 CftrP26361 1476 aa7.85□□□□□ -1.15
Hmgb1-ps8-201ENSMUST00000181542 Thoc2B1AZI6 1594 aaKnown RBP7.84□□□□□ -1.15
Hmgb1-ps8-201ENSMUST00000181542 Baz1bQ9Z277 1479 aa7.84□□□□□ -1.15
Hmgb1-ps8-201ENSMUST00000181542 Phldb1Q6PDH0 1371 aaKnown RBP7.82□□□□□ -1.16
Hmgb1-ps8-201ENSMUST00000181542 Wdr62Q3U3T8 1523 aa7.8□□□□□ -1.16
Hmgb1-ps8-201ENSMUST00000181542 Esf1Q3V1V3 845 aaKnown RBP7.8□□□□□ -1.16
Hmgb1-ps8-201ENSMUST00000181542 Frmpd1A2AKB4 1549 aa7.79□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms