RNA–Protein interactions for RNA: ENSMUST00000173370.1

Hmgb1-ps7-201, mousemouse

BASIC

Gene Hmgb1-ps7, Length 648 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps7-201ENSMUST00000173370 Chic1Q8CBW7 227 aa17.77■□□□□ 0.44
Hmgb1-ps7-201ENSMUST00000173370 Mapk8ip2Q9ERE9 830 aa17.63■□□□□ 0.41
Hmgb1-ps7-201ENSMUST00000173370 Phf23Q8BSN5 401 aa15.94■□□□□ 0.14
Hmgb1-ps7-201ENSMUST00000173370 Plppr3Q7TPB0 716 aa15.62■□□□□ 0.09
Hmgb1-ps7-201ENSMUST00000173370 Gab3Q8BSM5 595 aa15.34■□□□□ 0.05
Hmgb1-ps7-201ENSMUST00000173370 Senp3Q9EP97 568 aaKnown RBP14.73□□□□□ -0.05
Hmgb1-ps7-201ENSMUST00000173370 Kcna4Q61423 654 aa14.46□□□□□ -0.09
Hmgb1-ps7-201ENSMUST00000173370 Fam163aQ8CAA5 168 aa13.31□□□□□ -0.28
Hmgb1-ps7-201ENSMUST00000173370 Hoxd11P23813 323 aa12.98□□□□□ -0.33
Hmgb1-ps7-201ENSMUST00000173370 Dmrt2Q8BG36 561 aa12.98□□□□□ -0.33
Hmgb1-ps7-201ENSMUST00000173370 Trap1aP19473 224 aa12.94□□□□□ -0.34
Hmgb1-ps7-201ENSMUST00000173370 Ppargc1bQ8VHJ7 1014 aa12.83□□□□□ -0.36
Hmgb1-ps7-201ENSMUST00000173370 Slc4a1apE9PX68 744 aa12.57□□□□□ -0.4
Hmgb1-ps7-201ENSMUST00000173370 Dnajc5bQ9CQ94 199 aa12.42□□□□□ -0.42
Hmgb1-ps7-201ENSMUST00000173370 Znf219Q6IQX8 726 aa12.35□□□□□ -0.43
Hmgb1-ps7-201ENSMUST00000173370 Chrna2Q91X60 512 aa12.23□□□□□ -0.45
Hmgb1-ps7-201ENSMUST00000173370 Atf5O70191 283 aa12.17□□□□□ -0.46
Hmgb1-ps7-201ENSMUST00000173370 ArsiQ32KI9 573 aa12.15□□□□□ -0.46
Hmgb1-ps7-201ENSMUST00000173370 Ube2uB1AUC4 352 aa12.11□□□□□ -0.47
Hmgb1-ps7-201ENSMUST00000173370 Hs6st3Q9QYK4 470 aa12.09□□□□□ -0.47
Hmgb1-ps7-201ENSMUST00000173370 Rsph4aQ8BYM7 716 aa12.08□□□□□ -0.48
Hmgb1-ps7-201ENSMUST00000173370 Ppp4r2Q0VGB7 417 aa12□□□□□ -0.49
Hmgb1-ps7-201ENSMUST00000173370 Rimbp2Q80U40 1072 aa11.94□□□□□ -0.5
Hmgb1-ps7-201ENSMUST00000173370 Fam71e1A1L3C1 212 aa11.79□□□□□ -0.52
Hmgb1-ps7-201ENSMUST00000173370 1700123L14RikQ3V2K7 440 aa11.78□□□□□ -0.52
Hmgb1-ps7-201ENSMUST00000173370 Slc34a2Q9DBP0 697 aa11.75□□□□□ -0.53
Hmgb1-ps7-201ENSMUST00000173370 Akt1s1Q9D1F4 257 aa11.66□□□□□ -0.54
Hmgb1-ps7-201ENSMUST00000173370 GapdhsQ64467 440 aa11.54□□□□□ -0.56
Hmgb1-ps7-201ENSMUST00000173370 Nlrp6Q91WS2 869 aa11.53□□□□□ -0.56
Hmgb1-ps7-201ENSMUST00000173370 Cdca7Q9D0M2 382 aa11.49□□□□□ -0.57
Hmgb1-ps7-201ENSMUST00000173370 Bach1P97302 739 aa11.45□□□□□ -0.58
Hmgb1-ps7-201ENSMUST00000173370 AcrbpQ3V140 540 aa11.41□□□□□ -0.58
Hmgb1-ps7-201ENSMUST00000173370 Pde4cQ3UEI1 686 aa11.4□□□□□ -0.58
Hmgb1-ps7-201ENSMUST00000173370 C1qtnf12Q8R2Z0 308 aa11.38□□□□□ -0.59
Hmgb1-ps7-201ENSMUST00000173370 Sox12Q04890 314 aa11.37□□□□□ -0.59
Hmgb1-ps7-201ENSMUST00000173370 Rtn4Q99P72 1162 aaKnown RBP11.22□□□□□ -0.61
Hmgb1-ps7-201ENSMUST00000173370 Npm2Q80W85 207 aa11.15□□□□□ -0.62
Hmgb1-ps7-201ENSMUST00000173370 WdpcpQ8C456 722 aa11.15□□□□□ -0.62
Hmgb1-ps7-201ENSMUST00000173370 Riok3Q9DBU3 519 aaKnown RBP11.13□□□□□ -0.63
Hmgb1-ps7-201ENSMUST00000173370 Prm3Q62100 101 aa11.08□□□□□ -0.64
Hmgb1-ps7-201ENSMUST00000173370 MyclP10166 368 aa11.02□□□□□ -0.65
Hmgb1-ps7-201ENSMUST00000173370 Trim41Q5NCC3 630 aa11□□□□□ -0.65
Hmgb1-ps7-201ENSMUST00000173370 Tshz2Q68FE9 1030 aa10.98□□□□□ -0.65
Hmgb1-ps7-201ENSMUST00000173370 Ms4a5Q810P8 197 aa10.9□□□□□ -0.66
Hmgb1-ps7-201ENSMUST00000173370 Styxl1Q9DAR2 321 aa10.9□□□□□ -0.66
Hmgb1-ps7-201ENSMUST00000173370 Ehmt2Q9Z148 1263 aaKnown RBP10.9□□□□□ -0.66
Hmgb1-ps7-201ENSMUST00000173370 Znf704Q9ERQ3 566 aa10.89□□□□□ -0.67
Hmgb1-ps7-201ENSMUST00000173370 Slc4a5E9Q3M5 1116 aa10.85□□□□□ -0.67
Hmgb1-ps7-201ENSMUST00000173370 G430095P16RikE9Q913 147 aa10.75□□□□□ -0.69
Hmgb1-ps7-201ENSMUST00000173370 Ifnlr1Q8CGK5 535 aa10.74□□□□□ -0.69
Hmgb1-ps7-201ENSMUST00000173370 Zbtb12Q9Z150 459 aa10.66□□□□□ -0.7
Hmgb1-ps7-201ENSMUST00000173370 Zbtb7aO88939 569 aaKnown RBP10.64□□□□□ -0.71
Hmgb1-ps7-201ENSMUST00000173370 Ecm2Q5FW85 670 aa10.61□□□□□ -0.71
Hmgb1-ps7-201ENSMUST00000173370 Egfem1Q8C088 590 aa10.61□□□□□ -0.71
Hmgb1-ps7-201ENSMUST00000173370 Rnf216P58283 853 aa10.56□□□□□ -0.72
Hmgb1-ps7-201ENSMUST00000173370 Grwd1Q810D6 446 aaKnown RBP10.5□□□□□ -0.73
Hmgb1-ps7-201ENSMUST00000173370 Tcf3P15806 651 aa10.49□□□□□ -0.73
Hmgb1-ps7-201ENSMUST00000173370 Gtpbp6Q3U6U5 514 aa10.47□□□□□ -0.73
Hmgb1-ps7-201ENSMUST00000173370 Prdm10Q3UTQ7 1184 aa10.45□□□□□ -0.74
Hmgb1-ps7-201ENSMUST00000173370 Fbln2P37889 1221 aa10.41□□□□□ -0.74
Hmgb1-ps7-201ENSMUST00000173370 Npm3Q9CPP0 175 aaKnown RBP10.4□□□□□ -0.74
Hmgb1-ps7-201ENSMUST00000173370 MpndQ3TV65 487 aa10.35□□□□□ -0.75
Hmgb1-ps7-201ENSMUST00000173370 Abcb7Q61102 752 aaKnown RBP10.34□□□□□ -0.75
Hmgb1-ps7-201ENSMUST00000173370 Ppp1r37Q8BKR5 712 aa10.31□□□□□ -0.76
Hmgb1-ps7-201ENSMUST00000173370 Cacnb1Q8R3Z5 597 aa10.31□□□□□ -0.76
Hmgb1-ps7-201ENSMUST00000173370 Nkx1-1G3UXB3 402 aa10.21□□□□□ -0.77
Hmgb1-ps7-201ENSMUST00000173370 Ildr2B5TVM2 661 aa10.2□□□□□ -0.78
Hmgb1-ps7-201ENSMUST00000173370 Znf703P0CL69 594 aa10.2□□□□□ -0.78
Hmgb1-ps7-201ENSMUST00000173370 Skida1Q80YR3 822 aa10.19□□□□□ -0.78
Hmgb1-ps7-201ENSMUST00000173370 CatipB9EKE5 520 aa10.18□□□□□ -0.78
Hmgb1-ps7-201ENSMUST00000173370 Lrrc43Q3V0L5 667 aa10.1□□□□□ -0.79
Hmgb1-ps7-201ENSMUST00000173370 Kcnn1Q9EQR3 537 aa10.03□□□□□ -0.8
Hmgb1-ps7-201ENSMUST00000173370 Prr29B1ARI9 187 aa10.02□□□□□ -0.81
Hmgb1-ps7-201ENSMUST00000173370 Jarid2Q62315 1234 aa9.95□□□□□ -0.82
Hmgb1-ps7-201ENSMUST00000173370 Spock2Q9ER58 423 aa9.93□□□□□ -0.82
Hmgb1-ps7-201ENSMUST00000173370 MycnP03966 462 aaKnown RBP9.92□□□□□ -0.82
Hmgb1-ps7-201ENSMUST00000173370 Ppp6r1Q7TSI3 856 aa9.92□□□□□ -0.82
Hmgb1-ps7-201ENSMUST00000173370 Pitpnm1O35954 1243 aa9.85□□□□□ -0.83
Hmgb1-ps7-201ENSMUST00000173370 Cadps2Q8BYR5 1297 aa9.85□□□□□ -0.83
Hmgb1-ps7-201ENSMUST00000173370 Sra1Q80VJ2 232 aa9.83□□□□□ -0.84
Hmgb1-ps7-201ENSMUST00000173370 Hnrnpul2Q00PI9 745 aaKnown RBP9.82□□□□□ -0.84
Hmgb1-ps7-201ENSMUST00000173370 Prdm16A2A935 1275 aa9.81□□□□□ -0.84
Hmgb1-ps7-201ENSMUST00000173370 Nyap1Q6PFX7 833 aa9.76□□□□□ -0.85
Hmgb1-ps7-201ENSMUST00000173370 Pip4p2Q9CZX7 257 aa9.76□□□□□ -0.85
Hmgb1-ps7-201ENSMUST00000173370 Repin1Q5U4E2 545 aa9.75□□□□□ -0.85
Hmgb1-ps7-201ENSMUST00000173370 Ferd3lQ923Z4 168 aa9.75□□□□□ -0.85
Hmgb1-ps7-201ENSMUST00000173370 Clcn6O35454 870 aa9.74□□□□□ -0.85
Hmgb1-ps7-201ENSMUST00000173370 Trim35Q8C006 501 aa9.74□□□□□ -0.85
Hmgb1-ps7-201ENSMUST00000173370 Zbtb22Q9Z0G7 638 aa9.74□□□□□ -0.85
Hmgb1-ps7-201ENSMUST00000173370 Fam117bQ3U3E2 584 aa9.73□□□□□ -0.85
Hmgb1-ps7-201ENSMUST00000173370 Slc4a2P13808 1237 aaKnown RBP9.72□□□□□ -0.85
Hmgb1-ps7-201ENSMUST00000173370 Taok2Q6ZQ29 1240 aa9.71□□□□□ -0.86
Hmgb1-ps7-201ENSMUST00000173370 Kank3Q9Z1P7 791 aa9.69□□□□□ -0.86
Hmgb1-ps7-201ENSMUST00000173370 Pde4dQ01063 747 aa9.66□□□□□ -0.86
Hmgb1-ps7-201ENSMUST00000173370 Hdac5Q9Z2V6 1113 aa9.66□□□□□ -0.86
Hmgb1-ps7-201ENSMUST00000173370 TimelessQ9R1X4 1197 aa9.65□□□□□ -0.86
Hmgb1-ps7-201ENSMUST00000173370 Slc24a1Q91WD8 1130 aa9.63□□□□□ -0.87
Hmgb1-ps7-201ENSMUST00000173370 Chrm1P12657 460 aa9.61□□□□□ -0.87
Hmgb1-ps7-201ENSMUST00000173370 Zbtb7bQ64321 544 aa9.61□□□□□ -0.87
Hmgb1-ps7-201ENSMUST00000173370 Pdap1Q3UHX2 181 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 79.6 ms