RNA–Protein interactions for RNA: ENSMUST00000168910.1

Ccr9-204, Transcript of C-C chemokine receptor type 9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccr9, Length 2,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-204ENSMUST00000168910 Mapk8ip2Q9ERE9 830 aa19.03■□□□□ 0.64
Ccr9-204ENSMUST00000168910 Chic1Q8CBW7 227 aa17.52■□□□□ 0.4
Ccr9-204ENSMUST00000168910 Phf23Q8BSN5 401 aa15.37■□□□□ 0.05
Ccr9-204ENSMUST00000168910 GapdhsQ64467 440 aa14.89□□□□□ -0.03
Ccr9-204ENSMUST00000168910 Fam163aQ8CAA5 168 aa14.89□□□□□ -0.03
Ccr9-204ENSMUST00000168910 Gab3Q8BSM5 595 aa14.25□□□□□ -0.13
Ccr9-204ENSMUST00000168910 Senp3Q9EP97 568 aaKnown RBP13.42□□□□□ -0.26
Ccr9-204ENSMUST00000168910 ArsiQ32KI9 573 aa13.39□□□□□ -0.27
Ccr9-204ENSMUST00000168910 Plppr3Q7TPB0 716 aa13.38□□□□□ -0.27
Ccr9-204ENSMUST00000168910 Slc34a2Q9DBP0 697 aa13.37□□□□□ -0.27
Ccr9-204ENSMUST00000168910 Hoxd11P23813 323 aa12.56□□□□□ -0.4
Ccr9-204ENSMUST00000168910 Znf219Q6IQX8 726 aa12.47□□□□□ -0.41
Ccr9-204ENSMUST00000168910 Dnajc5bQ9CQ94 199 aa12.29□□□□□ -0.44
Ccr9-204ENSMUST00000168910 Cacnb1Q8R3Z5 597 aa12□□□□□ -0.49
Ccr9-204ENSMUST00000168910 Slc4a5E9Q3M5 1116 aa11.9□□□□□ -0.5
Ccr9-204ENSMUST00000168910 Akt1s1Q9D1F4 257 aa11.9□□□□□ -0.5
Ccr9-204ENSMUST00000168910 Znf704Q9ERQ3 566 aa11.87□□□□□ -0.51
Ccr9-204ENSMUST00000168910 Trap1aP19473 224 aa11.86□□□□□ -0.51
Ccr9-204ENSMUST00000168910 Rsph4aQ8BYM7 716 aa11.56□□□□□ -0.56
Ccr9-204ENSMUST00000168910 Chrna2Q91X60 512 aa11.51□□□□□ -0.57
Ccr9-204ENSMUST00000168910 Rimbp2Q80U40 1072 aa11.44□□□□□ -0.58
Ccr9-204ENSMUST00000168910 Znf703P0CL69 594 aa11.32□□□□□ -0.6
Ccr9-204ENSMUST00000168910 Ildr2B5TVM2 661 aa11.31□□□□□ -0.6
Ccr9-204ENSMUST00000168910 Prr29B1ARI9 187 aa10.81□□□□□ -0.68
Ccr9-204ENSMUST00000168910 Kcnn1Q9EQR3 537 aa10.81□□□□□ -0.68
Ccr9-204ENSMUST00000168910 Kcna4Q61423 654 aa10.69□□□□□ -0.7
Ccr9-204ENSMUST00000168910 Evx2P49749 475 aa10.57□□□□□ -0.72
Ccr9-204ENSMUST00000168910 NischQ80TM9 1593 aa10.5□□□□□ -0.73
Ccr9-204ENSMUST00000168910 Sox12Q04890 314 aa10.45□□□□□ -0.74
Ccr9-204ENSMUST00000168910 Grwd1Q810D6 446 aaKnown RBP10.37□□□□□ -0.75
Ccr9-204ENSMUST00000168910 Clcn6O35454 870 aa10.36□□□□□ -0.75
Ccr9-204ENSMUST00000168910 Egfem1Q8C088 590 aa10.29□□□□□ -0.76
Ccr9-204ENSMUST00000168910 Krtap4-1Q3UUY3 169 aa10.23□□□□□ -0.77
Ccr9-204ENSMUST00000168910 Gm35339A0A140LHH9 1649 aa10.23□□□□□ -0.77
Ccr9-204ENSMUST00000168910 Pip4p2Q9CZX7 257 aa10.22□□□□□ -0.77
Ccr9-204ENSMUST00000168910 Abcc9P70170 1546 aa10.11□□□□□ -0.79
Ccr9-204ENSMUST00000168910 Zbtb7aO88939 569 aaKnown RBP10.06□□□□□ -0.8
Ccr9-204ENSMUST00000168910 Abcc8B2RUS7 1588 aa10.03□□□□□ -0.8
Ccr9-204ENSMUST00000168910 Foxp4Q9DBY0 795 aaKnown RBP10.01□□□□□ -0.81
Ccr9-204ENSMUST00000168910 Lhx8O35652 367 aa9.97□□□□□ -0.81
Ccr9-204ENSMUST00000168910 Kank3Q9Z1P7 791 aa9.96□□□□□ -0.81
Ccr9-204ENSMUST00000168910 Bach1P97302 739 aa9.96□□□□□ -0.82
Ccr9-204ENSMUST00000168910 ArntlQ9WTL8 632 aa9.92□□□□□ -0.82
Ccr9-204ENSMUST00000168910 Rnf216P58283 853 aa9.91□□□□□ -0.82
Ccr9-204ENSMUST00000168910 Abcb7Q61102 752 aaKnown RBP9.81□□□□□ -0.84
Ccr9-204ENSMUST00000168910 Rhox8Q6VSS7 320 aa9.78□□□□□ -0.84
Ccr9-204ENSMUST00000168910 Ifnlr1Q8CGK5 535 aa9.77□□□□□ -0.84
Ccr9-204ENSMUST00000168910 Hs6st3Q9QYK4 470 aa9.76□□□□□ -0.85
Ccr9-204ENSMUST00000168910 Fxr2Q9WVR4 673 aaKnown RBP9.66□□□□□ -0.86
Ccr9-204ENSMUST00000168910 Gm11555B1AQ89 175 aa9.62□□□□□ -0.87
Ccr9-204ENSMUST00000168910 Nkx1-1G3UXB3 402 aa9.61□□□□□ -0.87
Ccr9-204ENSMUST00000168910 Atf5O70191 283 aa9.61□□□□□ -0.87
Ccr9-204ENSMUST00000168910 Ppp4r2Q0VGB7 417 aa9.61□□□□□ -0.87
Ccr9-204ENSMUST00000168910 Dmrt2Q8BG36 561 aa9.52□□□□□ -0.89
Ccr9-204ENSMUST00000168910 ScribQ80U72 1612 aa9.5□□□□□ -0.89
Ccr9-204ENSMUST00000168910 Gm11563B1AQ90 168 aa9.48□□□□□ -0.89
Ccr9-204ENSMUST00000168910 Pitpnm1O35954 1243 aa9.48□□□□□ -0.89
Ccr9-204ENSMUST00000168910 Krtap4-7Q9D732 168 aa9.48□□□□□ -0.89
Ccr9-204ENSMUST00000168910 Zbtb12Q9Z150 459 aa9.48□□□□□ -0.89
Ccr9-204ENSMUST00000168910 Cdca7Q9D0M2 382 aa9.47□□□□□ -0.89
Ccr9-204ENSMUST00000168910 WdpcpQ8C456 722 aa9.46□□□□□ -0.89
Ccr9-204ENSMUST00000168910 A0A1Y7VJH8 109 aa9.44□□□□□ -0.9
Ccr9-204ENSMUST00000168910 G430095P16RikE9Q913 147 aa9.44□□□□□ -0.9
Ccr9-204ENSMUST00000168910 Gtpbp6Q3U6U5 514 aa9.38□□□□□ -0.91
Ccr9-204ENSMUST00000168910 Trim35Q8C006 501 aa9.37□□□□□ -0.91
Ccr9-204ENSMUST00000168910 Pcdh10E9PXQ7 1057 aa9.36□□□□□ -0.91
Ccr9-204ENSMUST00000168910 Kiaa1522A2A7S8 1013 aa9.33□□□□□ -0.92
Ccr9-204ENSMUST00000168910 Rnf225Q9D7D1 332 aa9.33□□□□□ -0.92
Ccr9-204ENSMUST00000168910 Kdm5dQ62240 1548 aa9.27□□□□□ -0.92
Ccr9-204ENSMUST00000168910 Ppargc1bQ8VHJ7 1014 aa9.24□□□□□ -0.93
Ccr9-204ENSMUST00000168910 Ehmt2Q9Z148 1263 aaKnown RBP9.22□□□□□ -0.93
Ccr9-204ENSMUST00000168910 NacadQ5SWP3 1504 aa9.17□□□□□ -0.94
Ccr9-204ENSMUST00000168910 Rb1cc1Q9ESK9 1588 aa9.17□□□□□ -0.94
Ccr9-204ENSMUST00000168910 Ccdc136Q3TVA9 1136 aa9.16□□□□□ -0.94
Ccr9-204ENSMUST00000168910 Dcbld2Q91ZV3 769 aa9.15□□□□□ -0.94
Ccr9-204ENSMUST00000168910 Dcaf1Q80TR8 1506 aa9.12□□□□□ -0.95
Ccr9-204ENSMUST00000168910 Krtap28-10A0A1Y7VP58 119 aa9.08□□□□□ -0.96
Ccr9-204ENSMUST00000168910 Zcchc6Q5BLK4 1491 aaKnown RBP9.04□□□□□ -0.96
Ccr9-204ENSMUST00000168910 Pelp1Q9DBD5 1123 aaKnown RBP9.03□□□□□ -0.96
Ccr9-204ENSMUST00000168910 Dok7Q18PE0 504 aa9.01□□□□□ -0.97
Ccr9-204ENSMUST00000168910 Sycp2Q9CUU3 1500 aa9.01□□□□□ -0.97
Ccr9-204ENSMUST00000168910 Baz1aO88379 1555 aa9□□□□□ -0.97
Ccr9-204ENSMUST00000168910 A0A1Y7VLE6 161 aa9□□□□□ -0.97
Ccr9-204ENSMUST00000168910 Gjc2Q8BQU6 440 aa9□□□□□ -0.97
Ccr9-204ENSMUST00000168910 Krtap28-13A0A087WQP5 138 aa8.92□□□□□ -0.98
Ccr9-204ENSMUST00000168910 BicraF8VPZ9 1578 aa8.89□□□□□ -0.99
Ccr9-204ENSMUST00000168910 Cecr2E9Q2Z1 1453 aa8.84□□□□□ -0.99
Ccr9-204ENSMUST00000168910 Map3k10Q66L42 940 aa8.83□□□□□ -1
Ccr9-204ENSMUST00000168910 Rtl1Q7M732 1744 aa8.8□□□□□ -1
Ccr9-204ENSMUST00000168910 Smarca2Q6DIC0 1577 aa8.78□□□□□ -1
Ccr9-204ENSMUST00000168910 Crybg2B7ZCC2 1516 aa8.78□□□□□ -1
Ccr9-204ENSMUST00000168910 Trim41Q5NCC3 630 aa8.74□□□□□ -1.01
Ccr9-204ENSMUST00000168910 Ccdc180J3QNE4 1664 aa8.74□□□□□ -1.01
Ccr9-204ENSMUST00000168910 A030005K14RikA0A1Y7VNY1 122 aa8.72□□□□□ -1.01
Ccr9-204ENSMUST00000168910 Cngb1E1AZ71 1325 aa8.72□□□□□ -1.01
Ccr9-204ENSMUST00000168910 Hmx1O70218 332 aa8.7□□□□□ -1.02
Ccr9-204ENSMUST00000168910 Esf1Q3V1V3 845 aaKnown RBP8.69□□□□□ -1.02
Ccr9-204ENSMUST00000168910 SnphQ80U23 495 aa8.62□□□□□ -1.03
Ccr9-204ENSMUST00000168910 TMEM121BQ99MX7 572 aa8.62□□□□□ -1.03
Ccr9-204ENSMUST00000168910 Lce6aD3YV94 81 aa8.62□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms