RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Rhox8Q6VSS7 320 aa20.66■□□□□ 0.9
Chd3-202ENSMUST00000108661 Esf1Q3V1V3 845 aaKnown RBP18.65■□□□□ 0.58
Chd3-202ENSMUST00000108661 Cngb1E1AZ71 1325 aa18.39■□□□□ 0.53
Chd3-202ENSMUST00000108661 Zeb1Q64318 1117 aa18.35■□□□□ 0.53
Chd3-202ENSMUST00000108661 Ccdc136Q3TVA9 1136 aa18.3■□□□□ 0.52
Chd3-202ENSMUST00000108661 Ehmt2Q9Z148 1263 aaKnown RBP18.2■□□□□ 0.5
Chd3-202ENSMUST00000108661 Ube2uB1AUC4 352 aa18.16■□□□□ 0.5
Chd3-202ENSMUST00000108661 Npm2Q80W85 207 aa18.08■□□□□ 0.48
Chd3-202ENSMUST00000108661 NischQ80TM9 1593 aa17.9■□□□□ 0.46
Chd3-202ENSMUST00000108661 Trim41Q5NCC3 630 aa17.89■□□□□ 0.45
Chd3-202ENSMUST00000108661 Gab3Q8BSM5 595 aa17.84■□□□□ 0.45
Chd3-202ENSMUST00000108661 Myt1lP97500 1187 aa17.78■□□□□ 0.44
Chd3-202ENSMUST00000108661 Wdr66E9Q743 1299 aa17.57■□□□□ 0.4
Chd3-202ENSMUST00000108661 Il27Q8K3I6 234 aa17.53■□□□□ 0.4
Chd3-202ENSMUST00000108661 Las1lA2BE28 776 aaKnown RBP17.5■□□□□ 0.39
Chd3-202ENSMUST00000108661 Abcc9P70170 1546 aa17.49■□□□□ 0.39
Chd3-202ENSMUST00000108661 Rpgrip1Q9EPQ2 1331 aa17.4■□□□□ 0.38
Chd3-202ENSMUST00000108661 Amer1Q7TS75 1132 aa17.36■□□□□ 0.37
Chd3-202ENSMUST00000108661 Gm35339A0A140LHH9 1649 aa17.36■□□□□ 0.37
Chd3-202ENSMUST00000108661 Pelp1Q9DBD5 1123 aaKnown RBP17.26■□□□□ 0.35
Chd3-202ENSMUST00000108661 Zcchc6Q5BLK4 1491 aaKnown RBP17.04■□□□□ 0.32
Chd3-202ENSMUST00000108661 UbtfP25976 765 aaKnown RBP17■□□□□ 0.31
Chd3-202ENSMUST00000108661 Ap3b1Q9Z1T1 1105 aa16.94■□□□□ 0.3
Chd3-202ENSMUST00000108661 Slc24a1Q91WD8 1130 aa16.91■□□□□ 0.3
Chd3-202ENSMUST00000108661 Os9Q8K2C7 672 aa16.91■□□□□ 0.3
Chd3-202ENSMUST00000108661 Npm1Q61937 292 aaKnown RBP16.89■□□□□ 0.29
Chd3-202ENSMUST00000108661 Ifnlr1Q8CGK5 535 aa16.89■□□□□ 0.29
Chd3-202ENSMUST00000108661 Gm13697A2AK42 830 aa16.83■□□□□ 0.28
Chd3-202ENSMUST00000108661 Ttbk1Q6PCN3 1308 aa16.8■□□□□ 0.28
Chd3-202ENSMUST00000108661 Plppr3Q7TPB0 716 aa16.74■□□□□ 0.27
Chd3-202ENSMUST00000108661 Fam50aQ9WV03 339 aaKnown RBP16.74■□□□□ 0.27
Chd3-202ENSMUST00000108661 Neurod1Q60867 357 aa16.67■□□□□ 0.26
Chd3-202ENSMUST00000108661 HrcG5E8J6 738 aa16.64■□□□□ 0.25
Chd3-202ENSMUST00000108661 Zbtb7cQ8VCZ7 619 aa16.64■□□□□ 0.25
Chd3-202ENSMUST00000108661 NclP09405 707 aaKnown RBP16.57■□□□□ 0.24
Chd3-202ENSMUST00000108661 CenpbP27790 599 aa16.55■□□□□ 0.24
Chd3-202ENSMUST00000108661 Hnrnpul2Q00PI9 745 aaKnown RBP16.54■□□□□ 0.24
Chd3-202ENSMUST00000108661 Anp32bQ9EST5 272 aaKnown RBP16.51■□□□□ 0.23
Chd3-202ENSMUST00000108661 Atp1b4Q99ME6 356 aa16.46■□□□□ 0.23
Chd3-202ENSMUST00000108661 Fkbp15Q6P9Q6 1216 aaKnown RBP16.46■□□□□ 0.23
Chd3-202ENSMUST00000108661 4930567H17RikQ3V0K5 233 aa16.46■□□□□ 0.23
Chd3-202ENSMUST00000108661 Ubl4bQ9CQ84 188 aa16.45■□□□□ 0.22
Chd3-202ENSMUST00000108661 Gm13695A2AK44 830 aa16.45■□□□□ 0.22
Chd3-202ENSMUST00000108661 Stra8P70278 393 aa16.44■□□□□ 0.22
Chd3-202ENSMUST00000108661 Ccdc180J3QNE4 1664 aa16.44■□□□□ 0.22
Chd3-202ENSMUST00000108661 NefmP08553 848 aa16.43■□□□□ 0.22
Chd3-202ENSMUST00000108661 Rtl1Q7M732 1744 aa16.39■□□□□ 0.21
Chd3-202ENSMUST00000108661 Chic1Q8CBW7 227 aa16.38■□□□□ 0.21
Chd3-202ENSMUST00000108661 Lmod2Q3UHZ5 550 aa16.37■□□□□ 0.21
Chd3-202ENSMUST00000108661 Erich6D3Z6S9 713 aa16.35■□□□□ 0.21
Chd3-202ENSMUST00000108661 4933416C03RikQ3V063 378 aa16.33■□□□□ 0.21
Chd3-202ENSMUST00000108661 NrdcQ8BHG1 1161 aa16.3■□□□□ 0.2
Chd3-202ENSMUST00000108661 Safb2Q80YR5 991 aaKnown RBP16.3■□□□□ 0.2
Chd3-202ENSMUST00000108661 Ppargc1bQ8VHJ7 1014 aa16.29■□□□□ 0.2
Chd3-202ENSMUST00000108661 Eif5bQ05D44 1216 aaKnown RBP16.2■□□□□ 0.18
Chd3-202ENSMUST00000108661 Abcc8B2RUS7 1588 aa16.15■□□□□ 0.18
Chd3-202ENSMUST00000108661 Zbtb4Q5F293 982 aa16.1■□□□□ 0.17
Chd3-202ENSMUST00000108661 NeflP08551 543 aa16.09■□□□□ 0.17
Chd3-202ENSMUST00000108661 Hdac5Q9Z2V6 1113 aa16.07■□□□□ 0.16
Chd3-202ENSMUST00000108661 DiexfQ8BTT6 772 aaKnown RBP16.07■□□□□ 0.16
Chd3-202ENSMUST00000108661 Plekhg3Q4VAC9 1341 aa16.04■□□□□ 0.16
Chd3-202ENSMUST00000108661 Prdm10Q3UTQ7 1184 aa16.03■□□□□ 0.16
Chd3-202ENSMUST00000108661 Brd4Q9ESU6 1400 aaKnown RBP16.01■□□□□ 0.15
Chd3-202ENSMUST00000108661 Acin1Q9JIX8 1338 aaKnown RBP15.98■□□□□ 0.15
Chd3-202ENSMUST00000108661 Nlrp6Q91WS2 869 aa15.95■□□□□ 0.14
Chd3-202ENSMUST00000108661 Ercc6F8VPZ5 1481 aa15.92■□□□□ 0.14
Chd3-202ENSMUST00000108661 TonslQ6NZL6 1363 aa15.91■□□□□ 0.14
Chd3-202ENSMUST00000108661 Myt1Q8CFC2 1127 aa15.9■□□□□ 0.14
Chd3-202ENSMUST00000108661 P3h3Q8CG70 732 aa15.89■□□□□ 0.13
Chd3-202ENSMUST00000108661 Cdk11bP24788 784 aaKnown RBP15.87■□□□□ 0.13
Chd3-202ENSMUST00000108661 MyclP10166 368 aa15.87■□□□□ 0.13
Chd3-202ENSMUST00000108661 Rb1cc1Q9ESK9 1588 aa15.85■□□□□ 0.13
Chd3-202ENSMUST00000108661 NacadQ5SWP3 1504 aa15.75■□□□□ 0.11
Chd3-202ENSMUST00000108661 Polr3glQ8R0C0 218 aa15.75■□□□□ 0.11
Chd3-202ENSMUST00000108661 Clip1Q922J3 1391 aa15.71■□□□□ 0.11
Chd3-202ENSMUST00000108661 Ppp1r18Q8BQ30 594 aa15.71■□□□□ 0.11
Chd3-202ENSMUST00000108661 Arhgap27A2AB59 869 aa15.7■□□□□ 0.1
Chd3-202ENSMUST00000108661 Kif15Q6P9L6 1387 aa15.7■□□□□ 0.1
Chd3-202ENSMUST00000108661 Pcgf6Q99NA9 353 aa15.67■□□□□ 0.1
Chd3-202ENSMUST00000108661 Rangap1P46061 589 aaKnown RBP15.66■□□□□ 0.1
Chd3-202ENSMUST00000108661 Clstn2Q9ER65 966 aa15.66■□□□□ 0.1
Chd3-202ENSMUST00000108661 Nop58Q6DFW4 536 aaKnown RBP15.66■□□□□ 0.1
Chd3-202ENSMUST00000108661 Mier1Q5UAK0 511 aa15.66■□□□□ 0.1
Chd3-202ENSMUST00000108661 Rsf1E9PWW9 1441 aaKnown RBP15.64■□□□□ 0.1
Chd3-202ENSMUST00000108661 Chic2Q9D9G3 165 aa15.64■□□□□ 0.09
Chd3-202ENSMUST00000108661 ArxO35085 564 aa15.6■□□□□ 0.09
Chd3-202ENSMUST00000108661 Mapk8ip2Q9ERE9 830 aa15.6■□□□□ 0.09
Chd3-202ENSMUST00000108661 Tnnt3Q9QZ47 272 aa15.59■□□□□ 0.09
Chd3-202ENSMUST00000108661 Ccdc18Q640L5 1455 aa15.59■□□□□ 0.09
Chd3-202ENSMUST00000108661 Cep164Q5DU05 1446 aa15.57■□□□□ 0.08
Chd3-202ENSMUST00000108661 DaxxO35613 739 aa15.53■□□□□ 0.08
Chd3-202ENSMUST00000108661 BlmO88700 1416 aa15.51■□□□□ 0.07
Chd3-202ENSMUST00000108661 MlecQ6ZQI3 291 aaKnown RBP15.5■□□□□ 0.07
Chd3-202ENSMUST00000108661 Eid3Q3V124 375 aa15.49■□□□□ 0.07
Chd3-202ENSMUST00000108661 Gm38655A0A286YDK6 273 aa15.47■□□□□ 0.07
Chd3-202ENSMUST00000108661 Supt5hO55201 1082 aaKnown RBP15.47■□□□□ 0.07
Chd3-202ENSMUST00000108661 Ccer2J3QPU5 274 aa15.45■□□□□ 0.06
Chd3-202ENSMUST00000108661 Ggt6Q6PDE7 497 aa15.45■□□□□ 0.06
Chd3-202ENSMUST00000108661 Ythdc1E9Q5K9 736 aaKnown RBP15.45■□□□□ 0.06
Chd3-202ENSMUST00000108661 IqubQ8CDK3 788 aa15.44■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 99 ms