RNA–Protein interactions for RNA: ENSMUST00000025263.14

Tnf-201, Transcript of Tumor necrosis factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tnf, Length 1,639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tnf-201ENSMUST00000025263 Chic1Q8CBW7 227 aa30.31■■■□□ 2.44
Tnf-201ENSMUST00000025263 Mapk8ip2Q9ERE9 830 aa29.27■■■□□ 2.28
Tnf-201ENSMUST00000025263 Phf23Q8BSN5 401 aa27.33■■□□□ 1.97
Tnf-201ENSMUST00000025263 Plppr3Q7TPB0 716 aa26.57■■□□□ 1.84
Tnf-201ENSMUST00000025263 Gab3Q8BSM5 595 aa26.23■■□□□ 1.79
Tnf-201ENSMUST00000025263 Senp3Q9EP97 568 aaKnown RBP25.15■■□□□ 1.62
Tnf-201ENSMUST00000025263 Kcna4Q61423 654 aa24.45■■□□□ 1.5
Tnf-201ENSMUST00000025263 Trap1aP19473 224 aa22.19■■□□□ 1.14
Tnf-201ENSMUST00000025263 Hoxd11P23813 323 aa22.06■■□□□ 1.12
Tnf-201ENSMUST00000025263 Dmrt2Q8BG36 561 aa21.85■■□□□ 1.09
Tnf-201ENSMUST00000025263 Ppargc1bQ8VHJ7 1014 aa21.69■■□□□ 1.06
Tnf-201ENSMUST00000025263 Fam163aQ8CAA5 168 aa21.59■■□□□ 1.05
Tnf-201ENSMUST00000025263 Znf219Q6IQX8 726 aa21.13■□□□□ 0.97
Tnf-201ENSMUST00000025263 Slc4a1apE9PX68 744 aa21.07■□□□□ 0.96
Tnf-201ENSMUST00000025263 Chrna2Q91X60 512 aa20.97■□□□□ 0.95
Tnf-201ENSMUST00000025263 Rsph4aQ8BYM7 716 aa20.79■□□□□ 0.92
Tnf-201ENSMUST00000025263 Atf5O70191 283 aa20.68■□□□□ 0.9
Tnf-201ENSMUST00000025263 Dnajc5bQ9CQ94 199 aa20.6■□□□□ 0.89
Tnf-201ENSMUST00000025263 Rimbp2Q80U40 1072 aa20.5■□□□□ 0.87
Tnf-201ENSMUST00000025263 Ppp4r2Q0VGB7 417 aa20.47■□□□□ 0.87
Tnf-201ENSMUST00000025263 Hs6st3Q9QYK4 470 aa20.42■□□□□ 0.86
Tnf-201ENSMUST00000025263 Gm35339A0A140LHH9 1649 aa20.22■□□□□ 0.83
Tnf-201ENSMUST00000025263 1700123L14RikQ3V2K7 440 aa20.05■□□□□ 0.8
Tnf-201ENSMUST00000025263 NischQ80TM9 1593 aa20.04■□□□□ 0.8
Tnf-201ENSMUST00000025263 ArsiQ32KI9 573 aa20.01■□□□□ 0.79
Tnf-201ENSMUST00000025263 Akt1s1Q9D1F4 257 aa19.98■□□□□ 0.79
Tnf-201ENSMUST00000025263 Slc34a2Q9DBP0 697 aa19.69■□□□□ 0.74
Tnf-201ENSMUST00000025263 Ube2uB1AUC4 352 aa19.64■□□□□ 0.73
Tnf-201ENSMUST00000025263 Bach1P97302 739 aa19.62■□□□□ 0.73
Tnf-201ENSMUST00000025263 Fam71e1A1L3C1 212 aa19.56■□□□□ 0.72
Tnf-201ENSMUST00000025263 Abcc8B2RUS7 1588 aa19.37■□□□□ 0.69
Tnf-201ENSMUST00000025263 Abcc9P70170 1546 aa19.36■□□□□ 0.69
Tnf-201ENSMUST00000025263 Sox12Q04890 314 aa19.35■□□□□ 0.69
Tnf-201ENSMUST00000025263 Nlrp6Q91WS2 869 aa19.25■□□□□ 0.67
Tnf-201ENSMUST00000025263 Cdca7Q9D0M2 382 aa19.24■□□□□ 0.67
Tnf-201ENSMUST00000025263 WdpcpQ8C456 722 aa19.16■□□□□ 0.66
Tnf-201ENSMUST00000025263 C1qtnf12Q8R2Z0 308 aa19■□□□□ 0.63
Tnf-201ENSMUST00000025263 AcrbpQ3V140 540 aa18.96■□□□□ 0.63
Tnf-201ENSMUST00000025263 Pde4cQ3UEI1 686 aa18.92■□□□□ 0.62
Tnf-201ENSMUST00000025263 ScribQ80U72 1612 aa18.72■□□□□ 0.59
Tnf-201ENSMUST00000025263 Riok3Q9DBU3 519 aaKnown RBP18.67■□□□□ 0.58
Tnf-201ENSMUST00000025263 Npm2Q80W85 207 aa18.63■□□□□ 0.57
Tnf-201ENSMUST00000025263 Prm3Q62100 101 aa18.58■□□□□ 0.56
Tnf-201ENSMUST00000025263 MyclP10166 368 aa18.54■□□□□ 0.56
Tnf-201ENSMUST00000025263 Rtn4Q99P72 1162 aaKnown RBP18.52■□□□□ 0.55
Tnf-201ENSMUST00000025263 G430095P16RikE9Q913 147 aa18.47■□□□□ 0.55
Tnf-201ENSMUST00000025263 Ms4a5Q810P8 197 aa18.46■□□□□ 0.55
Tnf-201ENSMUST00000025263 Ifnlr1Q8CGK5 535 aa18.45■□□□□ 0.54
Tnf-201ENSMUST00000025263 Trim41Q5NCC3 630 aa18.4■□□□□ 0.54
Tnf-201ENSMUST00000025263 Tshz2Q68FE9 1030 aa18.38■□□□□ 0.53
Tnf-201ENSMUST00000025263 Zbtb7aO88939 569 aaKnown RBP18.33■□□□□ 0.52
Tnf-201ENSMUST00000025263 Egfem1Q8C088 590 aa18.31■□□□□ 0.52
Tnf-201ENSMUST00000025263 Styxl1Q9DAR2 321 aa18.27■□□□□ 0.51
Tnf-201ENSMUST00000025263 Grwd1Q810D6 446 aaKnown RBP18.2■□□□□ 0.5
Tnf-201ENSMUST00000025263 NacadQ5SWP3 1504 aa18.11■□□□□ 0.49
Tnf-201ENSMUST00000025263 Kdm5dQ62240 1548 aa18.11■□□□□ 0.49
Tnf-201ENSMUST00000025263 Ehmt2Q9Z148 1263 aaKnown RBP18.07■□□□□ 0.48
Tnf-201ENSMUST00000025263 Zbtb12Q9Z150 459 aa18.07■□□□□ 0.48
Tnf-201ENSMUST00000025263 Znf704Q9ERQ3 566 aa18■□□□□ 0.47
Tnf-201ENSMUST00000025263 Rnf216P58283 853 aa17.95■□□□□ 0.46
Tnf-201ENSMUST00000025263 Abcb7Q61102 752 aaKnown RBP17.95■□□□□ 0.46
Tnf-201ENSMUST00000025263 Gtpbp6Q3U6U5 514 aa17.91■□□□□ 0.46
Tnf-201ENSMUST00000025263 Slc4a5E9Q3M5 1116 aa17.9■□□□□ 0.46
Tnf-201ENSMUST00000025263 Sycp2Q9CUU3 1500 aa17.76■□□□□ 0.43
Tnf-201ENSMUST00000025263 Fbln2P37889 1221 aa17.74■□□□□ 0.43
Tnf-201ENSMUST00000025263 Dcaf1Q80TR8 1506 aa17.74■□□□□ 0.43
Tnf-201ENSMUST00000025263 Nkx1-1G3UXB3 402 aa17.69■□□□□ 0.42
Tnf-201ENSMUST00000025263 MpndQ3TV65 487 aa17.65■□□□□ 0.42
Tnf-201ENSMUST00000025263 Npm3Q9CPP0 175 aaKnown RBP17.63■□□□□ 0.41
Tnf-201ENSMUST00000025263 Ecm2Q5FW85 670 aa17.55■□□□□ 0.4
Tnf-201ENSMUST00000025263 BicraF8VPZ9 1578 aa17.54■□□□□ 0.4
Tnf-201ENSMUST00000025263 Tcf3P15806 651 aa17.52■□□□□ 0.4
Tnf-201ENSMUST00000025263 Rb1cc1Q9ESK9 1588 aa17.47■□□□□ 0.39
Tnf-201ENSMUST00000025263 Rhox8Q6VSS7 320 aa17.47■□□□□ 0.39
Tnf-201ENSMUST00000025263 Skida1Q80YR3 822 aa17.39■□□□□ 0.37
Tnf-201ENSMUST00000025263 Ppp1r37Q8BKR5 712 aa17.32■□□□□ 0.36
Tnf-201ENSMUST00000025263 Ccdc180J3QNE4 1664 aa17.25■□□□□ 0.35
Tnf-201ENSMUST00000025263 Rtl1Q7M732 1744 aa17.24■□□□□ 0.35
Tnf-201ENSMUST00000025263 Prdm10Q3UTQ7 1184 aa17.23■□□□□ 0.35
Tnf-201ENSMUST00000025263 Baz1aO88379 1555 aa17.19■□□□□ 0.34
Tnf-201ENSMUST00000025263 Zcchc6Q5BLK4 1491 aaKnown RBP17.05■□□□□ 0.32
Tnf-201ENSMUST00000025263 Crybg2B7ZCC2 1516 aa17.05■□□□□ 0.32
Tnf-201ENSMUST00000025263 Pds5bQ4VA53 1446 aaKnown RBP17.04■□□□□ 0.32
Tnf-201ENSMUST00000025263 Lrrc43Q3V0L5 667 aa17■□□□□ 0.31
Tnf-201ENSMUST00000025263 Jarid2Q62315 1234 aa16.94■□□□□ 0.3
Tnf-201ENSMUST00000025263 Thoc2B1AZI6 1594 aaKnown RBP16.91■□□□□ 0.3
Tnf-201ENSMUST00000025263 Pitpnm1O35954 1243 aa16.89■□□□□ 0.29
Tnf-201ENSMUST00000025263 Atad2bE9Q166 1460 aaKnown RBP16.87■□□□□ 0.29
Tnf-201ENSMUST00000025263 GapdhsQ64467 440 aa16.81■□□□□ 0.28
Tnf-201ENSMUST00000025263 Kcnn1Q9EQR3 537 aa16.79■□□□□ 0.28
Tnf-201ENSMUST00000025263 Trim35Q8C006 501 aa16.78■□□□□ 0.28
Tnf-201ENSMUST00000025263 Cecr2E9Q2Z1 1453 aa16.73■□□□□ 0.27
Tnf-201ENSMUST00000025263 Smarca4Q3TKT4 1613 aaKnown RBP16.71■□□□□ 0.27
Tnf-201ENSMUST00000025263 Ercc6F8VPZ5 1481 aa16.7■□□□□ 0.26
Tnf-201ENSMUST00000025263 Prr29B1ARI9 187 aa16.7■□□□□ 0.26
Tnf-201ENSMUST00000025263 Smarca2Q6DIC0 1577 aa16.69■□□□□ 0.26
Tnf-201ENSMUST00000025263 Cadps2Q8BYR5 1297 aa16.69■□□□□ 0.26
Tnf-201ENSMUST00000025263 Znf703P0CL69 594 aa16.68■□□□□ 0.26
Tnf-201ENSMUST00000025263 Cc2d2aQ8CFW7 1633 aa16.68■□□□□ 0.26
Tnf-201ENSMUST00000025263 Ildr2B5TVM2 661 aa16.65■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 152.3 ms