RNA–Protein interactions for RNA: ENSMUST00000016907.7

Scube1-201, Transcript of Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Scube1, Length 3,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1-201ENSMUST00000016907 Rhox8Q6VSS7 320 aa26.53■■□□□ 1.84
Scube1-201ENSMUST00000016907 NischQ80TM9 1593 aa24.09■■□□□ 1.45
Scube1-201ENSMUST00000016907 Ccdc136Q3TVA9 1136 aa24.02■■□□□ 1.44
Scube1-201ENSMUST00000016907 Ehmt2Q9Z148 1263 aaKnown RBP24.01■■□□□ 1.43
Scube1-201ENSMUST00000016907 Gm35339A0A140LHH9 1649 aa23.66■■□□□ 1.38
Scube1-201ENSMUST00000016907 Cngb1E1AZ71 1325 aa23.32■■□□□ 1.32
Scube1-201ENSMUST00000016907 Esf1Q3V1V3 845 aaKnown RBP23.28■■□□□ 1.32
Scube1-201ENSMUST00000016907 Gab3Q8BSM5 595 aa23.24■■□□□ 1.31
Scube1-201ENSMUST00000016907 Trim41Q5NCC3 630 aa23.04■■□□□ 1.28
Scube1-201ENSMUST00000016907 Abcc9P70170 1546 aa22.81■■□□□ 1.24
Scube1-201ENSMUST00000016907 Rpgrip1Q9EPQ2 1331 aa22.76■■□□□ 1.23
Scube1-201ENSMUST00000016907 Abcc8B2RUS7 1588 aa22.75■■□□□ 1.23
Scube1-201ENSMUST00000016907 Myt1lP97500 1187 aa22.67■■□□□ 1.22
Scube1-201ENSMUST00000016907 Zeb1Q64318 1117 aa22.58■■□□□ 1.21
Scube1-201ENSMUST00000016907 Npm2Q80W85 207 aa22.57■■□□□ 1.2
Scube1-201ENSMUST00000016907 Wdr66E9Q743 1299 aa22.4■■□□□ 1.18
Scube1-201ENSMUST00000016907 Ube2uB1AUC4 352 aa22.27■■□□□ 1.16
Scube1-201ENSMUST00000016907 Zcchc6Q5BLK4 1491 aaKnown RBP22.23■■□□□ 1.15
Scube1-201ENSMUST00000016907 Il27Q8K3I6 234 aa22.22■■□□□ 1.15
Scube1-201ENSMUST00000016907 UbtfP25976 765 aaKnown RBP22.19■■□□□ 1.14
Scube1-201ENSMUST00000016907 Las1lA2BE28 776 aaKnown RBP22.11■■□□□ 1.13
Scube1-201ENSMUST00000016907 HrcG5E8J6 738 aa22.02■■□□□ 1.12
Scube1-201ENSMUST00000016907 Acin1Q9JIX8 1338 aaKnown RBP22.02■■□□□ 1.12
Scube1-201ENSMUST00000016907 Ccdc180J3QNE4 1664 aa21.82■■□□□ 1.08
Scube1-201ENSMUST00000016907 Ap3b1Q9Z1T1 1105 aa21.76■■□□□ 1.07
Scube1-201ENSMUST00000016907 Rtl1Q7M732 1744 aa21.76■■□□□ 1.07
Scube1-201ENSMUST00000016907 ScribQ80U72 1612 aa21.7■■□□□ 1.06
Scube1-201ENSMUST00000016907 Ppargc1bQ8VHJ7 1014 aa21.68■■□□□ 1.06
Scube1-201ENSMUST00000016907 NefmP08553 848 aa21.54■■□□□ 1.04
Scube1-201ENSMUST00000016907 Fam50aQ9WV03 339 aaKnown RBP21.45■■□□□ 1.02
Scube1-201ENSMUST00000016907 Chic1Q8CBW7 227 aa21.42■■□□□ 1.02
Scube1-201ENSMUST00000016907 Pcgf6Q99NA9 353 aa21.4■■□□□ 1.02
Scube1-201ENSMUST00000016907 Slc24a1Q91WD8 1130 aa21.38■■□□□ 1.01
Scube1-201ENSMUST00000016907 NacadQ5SWP3 1504 aa21.36■■□□□ 1.01
Scube1-201ENSMUST00000016907 Plekhg3Q4VAC9 1341 aa21.28■■□□□ 1
Scube1-201ENSMUST00000016907 Mier1Q5UAK0 511 aa21.27■■□□□ 1
Scube1-201ENSMUST00000016907 Supt5hO55201 1082 aaKnown RBP21.26■□□□□ 0.99
Scube1-201ENSMUST00000016907 Neurod1Q60867 357 aa21.25■□□□□ 0.99
Scube1-201ENSMUST00000016907 Lmod2Q3UHZ5 550 aa21.23■□□□□ 0.99
Scube1-201ENSMUST00000016907 Kdm5dQ62240 1548 aa21.19■□□□□ 0.98
Scube1-201ENSMUST00000016907 Npm1Q61937 292 aaKnown RBP21.13■□□□□ 0.97
Scube1-201ENSMUST00000016907 Rb1cc1Q9ESK9 1588 aa21.12■□□□□ 0.97
Scube1-201ENSMUST00000016907 Dcaf1Q80TR8 1506 aa21.06■□□□□ 0.96
Scube1-201ENSMUST00000016907 NclP09405 707 aaKnown RBP21.04■□□□□ 0.96
Scube1-201ENSMUST00000016907 Eid3Q3V124 375 aa20.98■□□□□ 0.95
Scube1-201ENSMUST00000016907 Zbtb7cQ8VCZ7 619 aa20.98■□□□□ 0.95
Scube1-201ENSMUST00000016907 Cdk11bP24788 784 aaKnown RBP20.95■□□□□ 0.94
Scube1-201ENSMUST00000016907 Brd4Q9ESU6 1400 aaKnown RBP20.94■□□□□ 0.94
Scube1-201ENSMUST00000016907 TonslQ6NZL6 1363 aa20.89■□□□□ 0.94
Scube1-201ENSMUST00000016907 Nop58Q6DFW4 536 aaKnown RBP20.87■□□□□ 0.93
Scube1-201ENSMUST00000016907 Mapk8ip2Q9ERE9 830 aa20.87■□□□□ 0.93
Scube1-201ENSMUST00000016907 Sycp2Q9CUU3 1500 aa20.85■□□□□ 0.93
Scube1-201ENSMUST00000016907 Ifnlr1Q8CGK5 535 aa20.82■□□□□ 0.92
Scube1-201ENSMUST00000016907 Cep164Q5DU05 1446 aa20.79■□□□□ 0.92
Scube1-201ENSMUST00000016907 Ubl4bQ9CQ84 188 aa20.76■□□□□ 0.91
Scube1-201ENSMUST00000016907 Fkbp15Q6P9Q6 1216 aaKnown RBP20.76■□□□□ 0.91
Scube1-201ENSMUST00000016907 Clip1Q922J3 1391 aa20.71■□□□□ 0.91
Scube1-201ENSMUST00000016907 Zbtb4Q5F293 982 aa20.68■□□□□ 0.9
Scube1-201ENSMUST00000016907 Eif5bQ05D44 1216 aaKnown RBP20.67■□□□□ 0.9
Scube1-201ENSMUST00000016907 Os9Q8K2C7 672 aa20.62■□□□□ 0.89
Scube1-201ENSMUST00000016907 Sall2Q9QX96 1004 aa20.62■□□□□ 0.89
Scube1-201ENSMUST00000016907 CenpbP27790 599 aa20.61■□□□□ 0.89
Scube1-201ENSMUST00000016907 Stra8P70278 393 aa20.61■□□□□ 0.89
Scube1-201ENSMUST00000016907 Hnrnpul2Q00PI9 745 aaKnown RBP20.61■□□□□ 0.89
Scube1-201ENSMUST00000016907 Baz1aO88379 1555 aa20.59■□□□□ 0.89
Scube1-201ENSMUST00000016907 NrdcQ8BHG1 1161 aa20.55■□□□□ 0.88
Scube1-201ENSMUST00000016907 Chic2Q9D9G3 165 aa20.47■□□□□ 0.87
Scube1-201ENSMUST00000016907 Rsf1E9PWW9 1441 aaKnown RBP20.46■□□□□ 0.87
Scube1-201ENSMUST00000016907 Pelp1Q9DBD5 1123 aaKnown RBP20.44■□□□□ 0.86
Scube1-201ENSMUST00000016907 ClspnQ80YR7 1315 aa20.4■□□□□ 0.86
Scube1-201ENSMUST00000016907 Golga3P55937 1487 aa20.38■□□□□ 0.85
Scube1-201ENSMUST00000016907 BicraF8VPZ9 1578 aa20.36■□□□□ 0.85
Scube1-201ENSMUST00000016907 Prdm10Q3UTQ7 1184 aa20.36■□□□□ 0.85
Scube1-201ENSMUST00000016907 Gm38655A0A286YDK6 273 aa20.35■□□□□ 0.85
Scube1-201ENSMUST00000016907 Kif15Q6P9L6 1387 aa20.34■□□□□ 0.85
Scube1-201ENSMUST00000016907 Erich6D3Z6S9 713 aa20.33■□□□□ 0.85
Scube1-201ENSMUST00000016907 BlmO88700 1416 aa20.33■□□□□ 0.84
Scube1-201ENSMUST00000016907 Anp32bQ9EST5 272 aaKnown RBP20.29■□□□□ 0.84
Scube1-201ENSMUST00000016907 Crybg2B7ZCC2 1516 aa20.29■□□□□ 0.84
Scube1-201ENSMUST00000016907 Setd5Q5XJV7 1441 aa20.26■□□□□ 0.83
Scube1-201ENSMUST00000016907 Ccdc88bQ4QRL3 1481 aa20.25■□□□□ 0.83
Scube1-201ENSMUST00000016907 Aebp2Q9Z248 504 aaKnown RBP20.24■□□□□ 0.83
Scube1-201ENSMUST00000016907 Plppr3Q7TPB0 716 aa20.22■□□□□ 0.83
Scube1-201ENSMUST00000016907 Pds5bQ4VA53 1446 aaKnown RBP20.17■□□□□ 0.82
Scube1-201ENSMUST00000016907 Tnnt3Q9QZ47 272 aa20.15■□□□□ 0.82
Scube1-201ENSMUST00000016907 Ttbk1Q6PCN3 1308 aa20.12■□□□□ 0.81
Scube1-201ENSMUST00000016907 Cecr2E9Q2Z1 1453 aa20.08■□□□□ 0.81
Scube1-201ENSMUST00000016907 Atp1b4Q99ME6 356 aa20.07■□□□□ 0.8
Scube1-201ENSMUST00000016907 Gm13697A2AK42 830 aa20.07■□□□□ 0.8
Scube1-201ENSMUST00000016907 Csrnp3P59055 597 aa20.04■□□□□ 0.8
Scube1-201ENSMUST00000016907 NeflP08551 543 aa20.02■□□□□ 0.8
Scube1-201ENSMUST00000016907 Arhgap27A2AB59 869 aa19.94■□□□□ 0.78
Scube1-201ENSMUST00000016907 Atad2bE9Q166 1460 aaKnown RBP19.91■□□□□ 0.78
Scube1-201ENSMUST00000016907 Eea1Q8BL66 1411 aa19.91■□□□□ 0.78
Scube1-201ENSMUST00000016907 Rgl3Q3UYI5 709 aa19.9■□□□□ 0.78
Scube1-201ENSMUST00000016907 Ccer2J3QPU5 274 aa19.89■□□□□ 0.77
Scube1-201ENSMUST00000016907 Amer1Q7TS75 1132 aa19.88■□□□□ 0.77
Scube1-201ENSMUST00000016907 Ercc6F8VPZ5 1481 aa19.87■□□□□ 0.77
Scube1-201ENSMUST00000016907 Mrs2Q5NCE8 434 aa19.86■□□□□ 0.77
Scube1-201ENSMUST00000016907 Ccdc18Q640L5 1455 aa19.84■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms