RNA–Protein interactions for RNA: ENSMUST00000003599.8

Pcdhgb6-201, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhgb6, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb6-201ENSMUST00000003599 Rhox8Q6VSS7 320 aa22.41■■□□□ 1.18
Pcdhgb6-201ENSMUST00000003599 NischQ80TM9 1593 aa20.39■□□□□ 0.85
Pcdhgb6-201ENSMUST00000003599 Ccdc136Q3TVA9 1136 aa20.06■□□□□ 0.8
Pcdhgb6-201ENSMUST00000003599 Esf1Q3V1V3 845 aaKnown RBP19.95■□□□□ 0.78
Pcdhgb6-201ENSMUST00000003599 Cngb1E1AZ71 1325 aa19.76■□□□□ 0.75
Pcdhgb6-201ENSMUST00000003599 Trim41Q5NCC3 630 aa19.63■□□□□ 0.73
Pcdhgb6-201ENSMUST00000003599 Zeb1Q64318 1117 aa19.41■□□□□ 0.7
Pcdhgb6-201ENSMUST00000003599 Ehmt2Q9Z148 1263 aaKnown RBP19.39■□□□□ 0.69
Pcdhgb6-201ENSMUST00000003599 Gab3Q8BSM5 595 aa19.37■□□□□ 0.69
Pcdhgb6-201ENSMUST00000003599 Abcc9P70170 1546 aa19.35■□□□□ 0.69
Pcdhgb6-201ENSMUST00000003599 Npm2Q80W85 207 aa19.29■□□□□ 0.68
Pcdhgb6-201ENSMUST00000003599 Myt1lP97500 1187 aa19.1■□□□□ 0.65
Pcdhgb6-201ENSMUST00000003599 Ube2uB1AUC4 352 aa19.01■□□□□ 0.63
Pcdhgb6-201ENSMUST00000003599 Gm35339A0A140LHH9 1649 aa19■□□□□ 0.63
Pcdhgb6-201ENSMUST00000003599 Rpgrip1Q9EPQ2 1331 aa18.98■□□□□ 0.63
Pcdhgb6-201ENSMUST00000003599 Il27Q8K3I6 234 aa18.89■□□□□ 0.61
Pcdhgb6-201ENSMUST00000003599 Zcchc6Q5BLK4 1491 aaKnown RBP18.88■□□□□ 0.61
Pcdhgb6-201ENSMUST00000003599 Abcc8B2RUS7 1588 aa18.76■□□□□ 0.59
Pcdhgb6-201ENSMUST00000003599 Las1lA2BE28 776 aaKnown RBP18.67■□□□□ 0.58
Pcdhgb6-201ENSMUST00000003599 Wdr66E9Q743 1299 aa18.6■□□□□ 0.57
Pcdhgb6-201ENSMUST00000003599 HrcG5E8J6 738 aa18.47■□□□□ 0.55
Pcdhgb6-201ENSMUST00000003599 UbtfP25976 765 aaKnown RBP18.46■□□□□ 0.55
Pcdhgb6-201ENSMUST00000003599 Ccdc180J3QNE4 1664 aa18.31■□□□□ 0.52
Pcdhgb6-201ENSMUST00000003599 Npm1Q61937 292 aaKnown RBP18.28■□□□□ 0.52
Pcdhgb6-201ENSMUST00000003599 Ap3b1Q9Z1T1 1105 aa18.21■□□□□ 0.51
Pcdhgb6-201ENSMUST00000003599 Rtl1Q7M732 1744 aa18.12■□□□□ 0.49
Pcdhgb6-201ENSMUST00000003599 NefmP08553 848 aa18.07■□□□□ 0.48
Pcdhgb6-201ENSMUST00000003599 Fam50aQ9WV03 339 aaKnown RBP18.05■□□□□ 0.48
Pcdhgb6-201ENSMUST00000003599 Acin1Q9JIX8 1338 aaKnown RBP17.97■□□□□ 0.47
Pcdhgb6-201ENSMUST00000003599 Brd4Q9ESU6 1400 aaKnown RBP17.94■□□□□ 0.46
Pcdhgb6-201ENSMUST00000003599 Ubl4bQ9CQ84 188 aa17.92■□□□□ 0.46
Pcdhgb6-201ENSMUST00000003599 Rb1cc1Q9ESK9 1588 aa17.89■□□□□ 0.45
Pcdhgb6-201ENSMUST00000003599 NacadQ5SWP3 1504 aa17.88■□□□□ 0.45
Pcdhgb6-201ENSMUST00000003599 Lmod2Q3UHZ5 550 aa17.81■□□□□ 0.44
Pcdhgb6-201ENSMUST00000003599 Ifnlr1Q8CGK5 535 aa17.78■□□□□ 0.44
Pcdhgb6-201ENSMUST00000003599 Neurod1Q60867 357 aa17.78■□□□□ 0.44
Pcdhgb6-201ENSMUST00000003599 Slc24a1Q91WD8 1130 aa17.73■□□□□ 0.43
Pcdhgb6-201ENSMUST00000003599 Os9Q8K2C7 672 aa17.72■□□□□ 0.43
Pcdhgb6-201ENSMUST00000003599 NclP09405 707 aaKnown RBP17.69■□□□□ 0.42
Pcdhgb6-201ENSMUST00000003599 Plekhg3Q4VAC9 1341 aa17.67■□□□□ 0.42
Pcdhgb6-201ENSMUST00000003599 Zbtb7cQ8VCZ7 619 aa17.66■□□□□ 0.42
Pcdhgb6-201ENSMUST00000003599 Fkbp15Q6P9Q6 1216 aaKnown RBP17.64■□□□□ 0.41
Pcdhgb6-201ENSMUST00000003599 Chic1Q8CBW7 227 aa17.63■□□□□ 0.41
Pcdhgb6-201ENSMUST00000003599 Stra8P70278 393 aa17.58■□□□□ 0.41
Pcdhgb6-201ENSMUST00000003599 Hnrnpul2Q00PI9 745 aaKnown RBP17.58■□□□□ 0.41
Pcdhgb6-201ENSMUST00000003599 Dcaf1Q80TR8 1506 aa17.58■□□□□ 0.41
Pcdhgb6-201ENSMUST00000003599 Pelp1Q9DBD5 1123 aaKnown RBP17.53■□□□□ 0.4
Pcdhgb6-201ENSMUST00000003599 Anp32bQ9EST5 272 aaKnown RBP17.51■□□□□ 0.39
Pcdhgb6-201ENSMUST00000003599 Gm13697A2AK42 830 aa17.5■□□□□ 0.39
Pcdhgb6-201ENSMUST00000003599 Baz1aO88379 1555 aa17.48■□□□□ 0.39
Pcdhgb6-201ENSMUST00000003599 Kdm5dQ62240 1548 aa17.45■□□□□ 0.38
Pcdhgb6-201ENSMUST00000003599 Mier1Q5UAK0 511 aa17.45■□□□□ 0.38
Pcdhgb6-201ENSMUST00000003599 Clip1Q922J3 1391 aa17.43■□□□□ 0.38
Pcdhgb6-201ENSMUST00000003599 TonslQ6NZL6 1363 aa17.42■□□□□ 0.38
Pcdhgb6-201ENSMUST00000003599 Ttbk1Q6PCN3 1308 aa17.41■□□□□ 0.38
Pcdhgb6-201ENSMUST00000003599 Kif15Q6P9L6 1387 aa17.41■□□□□ 0.38
Pcdhgb6-201ENSMUST00000003599 NrdcQ8BHG1 1161 aa17.4■□□□□ 0.38
Pcdhgb6-201ENSMUST00000003599 Cep164Q5DU05 1446 aa17.4■□□□□ 0.38
Pcdhgb6-201ENSMUST00000003599 Ercc6F8VPZ5 1481 aa17.39■□□□□ 0.37
Pcdhgb6-201ENSMUST00000003599 Rsf1E9PWW9 1441 aaKnown RBP17.38■□□□□ 0.37
Pcdhgb6-201ENSMUST00000003599 Ppargc1bQ8VHJ7 1014 aa17.37■□□□□ 0.37
Pcdhgb6-201ENSMUST00000003599 Plppr3Q7TPB0 716 aa17.36■□□□□ 0.37
Pcdhgb6-201ENSMUST00000003599 Erich6D3Z6S9 713 aa17.32■□□□□ 0.36
Pcdhgb6-201ENSMUST00000003599 CenpbP27790 599 aa17.29■□□□□ 0.36
Pcdhgb6-201ENSMUST00000003599 Cdk11bP24788 784 aaKnown RBP17.26■□□□□ 0.35
Pcdhgb6-201ENSMUST00000003599 Atp1b4Q99ME6 356 aa17.24■□□□□ 0.35
Pcdhgb6-201ENSMUST00000003599 Golga3P55937 1487 aa17.23■□□□□ 0.35
Pcdhgb6-201ENSMUST00000003599 Pds5bQ4VA53 1446 aaKnown RBP17.2■□□□□ 0.34
Pcdhgb6-201ENSMUST00000003599 Eid3Q3V124 375 aa17.19■□□□□ 0.34
Pcdhgb6-201ENSMUST00000003599 Zbtb4Q5F293 982 aa17.18■□□□□ 0.34
Pcdhgb6-201ENSMUST00000003599 Gm13695A2AK44 830 aa17.18■□□□□ 0.34
Pcdhgb6-201ENSMUST00000003599 Myt1Q8CFC2 1127 aa17.17■□□□□ 0.34
Pcdhgb6-201ENSMUST00000003599 Ccdc18Q640L5 1455 aa17.16■□□□□ 0.34
Pcdhgb6-201ENSMUST00000003599 Pcgf6Q99NA9 353 aa17.15■□□□□ 0.34
Pcdhgb6-201ENSMUST00000003599 Nop58Q6DFW4 536 aaKnown RBP17.14■□□□□ 0.33
Pcdhgb6-201ENSMUST00000003599 BlmO88700 1416 aa17.12■□□□□ 0.33
Pcdhgb6-201ENSMUST00000003599 Chic2Q9D9G3 165 aa17.12■□□□□ 0.33
Pcdhgb6-201ENSMUST00000003599 Setd5Q5XJV7 1441 aa17.11■□□□□ 0.33
Pcdhgb6-201ENSMUST00000003599 Hdac5Q9Z2V6 1113 aa17.11■□□□□ 0.33
Pcdhgb6-201ENSMUST00000003599 Eif5bQ05D44 1216 aaKnown RBP17.08■□□□□ 0.32
Pcdhgb6-201ENSMUST00000003599 Sycp2Q9CUU3 1500 aa17.06■□□□□ 0.32
Pcdhgb6-201ENSMUST00000003599 Ccer2J3QPU5 274 aa17.05■□□□□ 0.32
Pcdhgb6-201ENSMUST00000003599 Arhgap27A2AB59 869 aa17.04■□□□□ 0.32
Pcdhgb6-201ENSMUST00000003599 NeflP08551 543 aa17.01■□□□□ 0.31
Pcdhgb6-201ENSMUST00000003599 Prdm10Q3UTQ7 1184 aa17■□□□□ 0.31
Pcdhgb6-201ENSMUST00000003599 Safb2Q80YR5 991 aaKnown RBP16.99■□□□□ 0.31
Pcdhgb6-201ENSMUST00000003599 Supt5hO55201 1082 aaKnown RBP16.99■□□□□ 0.31
Pcdhgb6-201ENSMUST00000003599 Clstn2Q9ER65 966 aa16.97■□□□□ 0.31
Pcdhgb6-201ENSMUST00000003599 Tnnt3Q9QZ47 272 aa16.91■□□□□ 0.3
Pcdhgb6-201ENSMUST00000003599 Mapk8ip2Q9ERE9 830 aa16.89■□□□□ 0.29
Pcdhgb6-201ENSMUST00000003599 ClspnQ80YR7 1315 aa16.86■□□□□ 0.29
Pcdhgb6-201ENSMUST00000003599 Nlrp6Q91WS2 869 aa16.86■□□□□ 0.29
Pcdhgb6-201ENSMUST00000003599 Eea1Q8BL66 1411 aa16.86■□□□□ 0.29
Pcdhgb6-201ENSMUST00000003599 Amer1Q7TS75 1132 aa16.8■□□□□ 0.28
Pcdhgb6-201ENSMUST00000003599 ScribQ80U72 1612 aa16.8■□□□□ 0.28
Pcdhgb6-201ENSMUST00000003599 Crybg2B7ZCC2 1516 aa16.79■□□□□ 0.28
Pcdhgb6-201ENSMUST00000003599 Phldb1Q6PDH0 1371 aaKnown RBP16.78■□□□□ 0.28
Pcdhgb6-201ENSMUST00000003599 Atad2bE9Q166 1460 aaKnown RBP16.77■□□□□ 0.28
Pcdhgb6-201ENSMUST00000003599 Cux2P70298 1426 aa16.77■□□□□ 0.27
Pcdhgb6-201ENSMUST00000003599 P3h3Q8CG70 732 aa16.76■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 379.8 ms