RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 VARSP26640 1264 aaKnown RBP13.95□□□□□ -0.18
COL1A2-201ENST00000297268 DCDC1P59894 354 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 CD83Q01151 205 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 DPY19L1Q2PZI1 675 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 ADGRG6Q86SQ4 1221 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 PIM3Q86V86 326 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 CRELD1Q96HD1 420 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 GPR88Q9GZN0 384 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 ADAM7Q9H2U9 754 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 SPIN1Q9Y657 262 aaPredicted RBP13.95□□□□□ -0.18
COL1A2-201ENST00000297268 MANSC4A6NHS7 340 aaPredicted RBP13.95□□□□□ -0.18
COL1A2-201ENST00000297268 SLC9A3R1O14745 358 aaPredicted RBP13.95□□□□□ -0.18
COL1A2-201ENST00000297268 FFAR2O15552 330 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 C22orf31O95567 290 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 OR1D2P34982 312 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 MAPK12P53778 367 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 TUBA1BP68363 451 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 HSPB3Q12988 150 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 TARDBPQ13148 414 aaKnown RBP eCLIP13.95□□□□□ -0.18
COL1A2-201ENST00000297268 WSCD2Q2TBF2 565 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 KLHL22Q53GT1 634 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 LBX2Q6XYB7 198 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 TUBA1AQ71U36 451 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 PQLC3Q8N755 202 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 TNFAIP8L1Q8WVP5 186 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 SIPA1Q96FS4 1042 aa13.95□□□□□ -0.18
COL1A2-201ENST00000297268 PRR11Q96HE9 360 aaPredicted RBP13.95□□□□□ -0.18
COL1A2-201ENST00000297268 ZNF641Q96N77 438 aaPredicted RBP13.95□□□□□ -0.18
COL1A2-201ENST00000297268 EIF3KQ9UBQ5 218 aaKnown RBP13.95□□□□□ -0.18
COL1A2-201ENST00000297268 TREHO43280 583 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 SLC2A2P11168 524 aaPredicted RBP13.94□□□□□ -0.18
COL1A2-201ENST00000297268 CASP9P55211 416 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 RAB39AQ14964 217 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 MPPE1Q53F39 396 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 SYCE2Q6PIF2 218 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 ZNF517Q6ZMY9 492 aaPredicted RBP13.94□□□□□ -0.18
COL1A2-201ENST00000297268 AURKBQ96GD4 344 aaPredicted RBP13.94□□□□□ -0.18
COL1A2-201ENST00000297268 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 BCL2L14Q9BZR8 327 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 PAK6Q9NQU5 681 aaPredicted RBP13.94□□□□□ -0.18
COL1A2-201ENST00000297268 FCF1Q9Y324 198 aaKnown RBP13.94□□□□□ -0.18
COL1A2-201ENST00000297268 C1QTNF3-AMACRE9PGA6 284 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 NIPSNAP2O75323 286 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 ATF6P18850 670 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 PTGS2P35354 604 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 NFKB2Q00653 900 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 MAP2K5Q13163 448 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 DSC3Q14574 896 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 SERPINA13PQ6UXR4 307 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 CDHR3Q6ZTQ4 885 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 CLEC20AQ6ZU45 233 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 CHST15Q7LFX5 561 aaPredicted RBP13.94□□□□□ -0.18
COL1A2-201ENST00000297268 CAND1Q86VP6 1230 aaKnown RBP13.94□□□□□ -0.18
COL1A2-201ENST00000297268 SNX33Q8WV41 574 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 ZNF558Q96NG5 402 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 PEBP4Q96S96 227 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 PCDHGB3Q9Y5G1 929 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 CAMTA1Q9Y6Y1 1673 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 SNED1Q8TER0 1413 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 NOTOA8MTQ0 251 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 CPNE3O75131 537 aaKnown RBP13.94□□□□□ -0.18
COL1A2-201ENST00000297268 CDK14O94921 469 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 VBP1P61758 197 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 LSAMPQ13449 338 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 ZNF404Q494X3 552 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 LGI4Q8N135 537 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 LMO3Q8TAP4 145 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 RERGQ96A58 199 aaPredicted RBP13.94□□□□□ -0.18
COL1A2-201ENST00000297268 ZUFSPQ96AP4 578 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 IRF2BPLQ9H1B7 796 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 GALPQ9UBC7 116 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 IKZF2Q9UKS7 526 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 SLIT2O94813 1529 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 MON2Q7Z3U7 1717 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 RIIAD1A6NNX1 92 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 MID1O15344 667 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 DNAJB1P25685 340 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 SCNN1AP37088 669 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 NUDT6P53370 316 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 LARS2Q15031 903 aaKnown RBP13.94□□□□□ -0.18
COL1A2-201ENST00000297268 DENND1AQ8TEH3 1009 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 PIGKQ92643 395 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 ZFP3Q96NJ6 502 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 UCKL1Q9NWZ5 548 aa13.94□□□□□ -0.18
COL1A2-201ENST00000297268 CPSF4LA6NMK7 179 aaKnown RBP13.93□□□□□ -0.18
COL1A2-201ENST00000297268 GTPBP1O00178 669 aaKnown RBP13.93□□□□□ -0.18
COL1A2-201ENST00000297268 SLC25A12O75746 678 aa13.93□□□□□ -0.18
COL1A2-201ENST00000297268 C8GP07360 202 aa13.93□□□□□ -0.18
COL1A2-201ENST00000297268 PRKACGP22612 351 aa13.93□□□□□ -0.18
COL1A2-201ENST00000297268 ELK4P28324 431 aa13.93□□□□□ -0.18
COL1A2-201ENST00000297268 CSTF1Q05048 431 aaKnown RBP13.93□□□□□ -0.18
COL1A2-201ENST00000297268 ERMAPQ96PL5 475 aaPredicted RBP13.93□□□□□ -0.18
COL1A2-201ENST00000297268 HAPLN3Q96S86 360 aa13.93□□□□□ -0.18
COL1A2-201ENST00000297268 POLR2J3Q9H1A7 115 aaKnown RBP13.93□□□□□ -0.18
COL1A2-201ENST00000297268 ELL3Q9HB65 397 aaPredicted RBP13.93□□□□□ -0.18
COL1A2-201ENST00000297268 NCKAP1Q9Y2A7 1128 aa13.93□□□□□ -0.18
COL1A2-201ENST00000297268 PCDHGA4Q9Y5G9 962 aa13.93□□□□□ -0.18
COL1A2-201ENST00000297268 ZNF24P17028 368 aa13.93□□□□□ -0.18
COL1A2-201ENST00000297268 CLCN4P51793 760 aa13.93□□□□□ -0.18
COL1A2-201ENST00000297268 MTERF1Q99551 399 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms