Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.76■■■■□ 3.15
MID1O15344 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.9■■■■□ 3.02
MID1O15344 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
MID1O15344 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
MID1O15344 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
MID1O15344 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.6■■■□□ 2.97
MID1O15344 AL356512.1-201ENST00000607453 1739 ntBASIC33.47■■■□□ 2.95
MID1O15344 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.34■■■□□ 2.93
MID1O15344 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.63■■■□□ 2.81
MID1O15344 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.57■■■□□ 2.8
MID1O15344 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.55■■■□□ 2.8
MID1O15344 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.46■■■□□ 2.79
MID1O15344 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.44■■■□□ 2.78
MID1O15344 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.37■■■□□ 2.77
MID1O15344 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.36■■■□□ 2.77
MID1O15344 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.31■■■□□ 2.76
MID1O15344 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
MID1O15344 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.1■■■□□ 2.73
MID1O15344 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
MID1O15344 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
MID1O15344 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
MID1O15344 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
MID1O15344 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
MID1O15344 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.53■■■□□ 2.64
MID1O15344 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
MID1O15344 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
MID1O15344 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
MID1O15344 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.42■■■□□ 2.62
MID1O15344 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
MID1O15344 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.29■■■□□ 2.6
MID1O15344 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
MID1O15344 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
MID1O15344 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
MID1O15344 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
MID1O15344 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31■■■□□ 2.55
MID1O15344 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
MID1O15344 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.53
MID1O15344 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
MID1O15344 AC015813.7-201ENST00000623294 581 ntBASIC30.84■■■□□ 2.53
MID1O15344 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.78■■■□□ 2.52
MID1O15344 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.72■■■□□ 2.51
MID1O15344 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
MID1O15344 AC006077.2-201ENST00000623591 457 ntBASIC30.69■■■□□ 2.5
MID1O15344 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
MID1O15344 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
MID1O15344 ZNRF2P1-201ENST00000441407 443 ntBASIC30.62■■■□□ 2.49
MID1O15344 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
MID1O15344 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.44■■■□□ 2.46
MID1O15344 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.43■■■□□ 2.46
MID1O15344 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
MID1O15344 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
MID1O15344 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.39■■■□□ 2.45
MID1O15344 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.38■■■□□ 2.45
MID1O15344 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
MID1O15344 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.25■■■□□ 2.43
MID1O15344 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
MID1O15344 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
MID1O15344 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
MID1O15344 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
MID1O15344 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
MID1O15344 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
MID1O15344 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.03■■■□□ 2.4
MID1O15344 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
MID1O15344 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
MID1O15344 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.95■■■□□ 2.38
MID1O15344 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.92■■■□□ 2.38
MID1O15344 AP002365.1-201ENST00000603448 772 ntBASIC29.9■■■□□ 2.38
MID1O15344 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
MID1O15344 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
MID1O15344 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
MID1O15344 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
MID1O15344 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
MID1O15344 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.76■■■□□ 2.35
MID1O15344 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.75■■■□□ 2.35
MID1O15344 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
MID1O15344 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.7■■■□□ 2.35
MID1O15344 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.7■■■□□ 2.34
MID1O15344 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.69■■■□□ 2.34
MID1O15344 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
MID1O15344 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
MID1O15344 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.66■■■□□ 2.34
MID1O15344 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.65■■■□□ 2.34
MID1O15344 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
MID1O15344 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.62■■■□□ 2.33
MID1O15344 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
MID1O15344 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
MID1O15344 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.53■■■□□ 2.32
MID1O15344 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
MID1O15344 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
MID1O15344 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
MID1O15344 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.5■■■□□ 2.31
MID1O15344 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
MID1O15344 DYNLL1-208ENST00000550178 581 ntBASIC29.5■■■□□ 2.31
MID1O15344 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.48■■■□□ 2.31
MID1O15344 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
MID1O15344 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.44■■■□□ 2.3
MID1O15344 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
MID1O15344 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.41■■■□□ 2.3
MID1O15344 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
MID1O15344 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms