RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ADAMDEC1O15204 470 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 CSPG5O95196 566 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 IL15P40933 162 aaPredicted RBP5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 LMAN1P49257 510 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 PNLIPRP2P54317 469 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 BACE1P56817 501 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 TFCP2Q12800 502 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 KLF9Q13886 244 aaPredicted RBP5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 RABEP1Q15276 862 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 PRTGQ2VWP7 1150 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 PXDC1Q5TGL8 231 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 FAM109BQ6ICB4 259 aaPredicted RBP5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 SYCE2Q6PIF2 218 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 B3GNT6Q6ZMB0 384 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 AACSQ86V21 672 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 TRPV1Q8NER1 839 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 APPL2Q8NEU8 664 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 URB1-AS1Q96HZ7 61 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 RADILQ96JH8 1075 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 EGLN2Q96KS0 407 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 PIGMQ9H3S5 423 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 MARCH4Q9P2E8 410 aaPredicted RBP5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 SLC9A2Q9UBY0 812 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 GIMAP2Q9UG22 337 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 FBXW11Q9UKB1 542 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 ZNF711Q9Y462 761 aa5.6□□□□□ -1.51
RNU4-39P-201ENST00000362455 DNAH12Q6ZR08 3092 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 MUC3AQ02505 3323 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 PDS5AQ29RF7 1337 aaKnown RBP5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 MYH3P11055 1940 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 A0A1B0GUL7 405 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 BECN2A8MW95 431 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 WNT9BO14905 357 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 VNN2O95498 520 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 SYF2O95926 243 aaKnown RBP5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 LCATP04180 440 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 HIST1H2ABP04908 130 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 MMP9P14780 707 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 NAGAP17050 411 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 HIST1H2ADP20671 130 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 TBXAS1P24557 533 aaPredicted RBP5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 SUOXP51687 545 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 PRPF4BQ13523 1007 aaKnown RBP5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 KCNC3Q14003 757 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 HNF4GQ14541 408 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 PNLIPRP3Q17RR3 467 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 C9orf50Q5SZB4 431 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 RARS2Q5T160 578 aaKnown RBP5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 HIST3H2AQ7L7L0 130 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 MRPL10Q7Z7H8 261 aaKnown RBP5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 SDCCAG8Q86SQ7 713 aaPredicted RBP5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 AADATQ8N5Z0 425 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 SYT2Q8N9I0 419 aaPredicted RBP5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 AVL9Q8NBF6 648 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 GPRC5AQ8NFJ5 357 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 DENND1AQ8TEH3 1009 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 TRPC4APQ8TEL6 797 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 MEIS3Q99687 375 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 BAG1Q99933 345 aaPredicted RBP5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 HAUS8Q9BT25 410 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 KIFC3Q9BVG8 833 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 OSGEPL1Q9H4B0 414 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 PLAC1Q9HBJ0 212 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 SLC35C2Q9NQQ7 365 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 ACSS1Q9NUB1 689 aaPredicted RBP5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 COPG2Q9UBF2 871 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 CDC14AQ9UNH5 594 aa5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 EXO1Q9UQ84 846 aaKnown RBP5.59□□□□□ -1.51
RNU4-39P-201ENST00000362455 COL2A1P02458 1487 aaPredicted RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 LY6G6EA0A0G2JKS1 128 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 UBE2CO00762 179 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 HSPA12AO43301 675 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 PPFIA2O75334 1257 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 SOX30O94993 753 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 ICAM1P05362 532 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 UBTFL1P0CB47 393 aaPredicted RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 DDX5P17844 614 aaKnown RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 TRIM21P19474 475 aaKnown RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 UBA1P22314 1058 aaKnown RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 ITGB8P26012 769 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 HNRNPH1P31943 449 aaKnown RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 GPR143P51810 404 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 RAD23BP54727 409 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 NANOS3P60323 173 aaKnown RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 ECT2LQ008S8 904 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 CDC16Q13042 620 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 SHHQ15465 462 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 EFNB3Q15768 340 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 ZNF805Q5CZA5 627 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 OTUD1Q5VV17 481 aaPredicted RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 DENND5BQ6ZUT9 1274 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 CACNA2D4Q7Z3S7 1137 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 GPR142Q7Z601 462 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 DZIP1Q86YF9 867 aaKnown RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 FAM9BQ8IZU0 186 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 NSMCE1Q8WV22 266 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 RPL36ALQ969Q0 106 aaKnown RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 MOAP1Q96BY2 351 aa5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 CNDP2Q96KP4 475 aaKnown RBP5.58□□□□□ -1.52
RNU4-39P-201ENST00000362455 CDX2Q99626 313 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms