RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A ISA1Q07821 250 aaPredicted RBP9.4□□□□□ -0.9
TGA1tA(UGC)A ISW2Q08773 1120 aa9.4□□□□□ -0.9
TGA1tA(UGC)A FKS1P38631 1876 aaKnown RBP9.4□□□□□ -0.91
TGA1tA(UGC)A TKL1P23254 680 aaKnown RBP9.39□□□□□ -0.91
TGA1tA(UGC)A DBP1P24784 617 aaKnown RBP9.39□□□□□ -0.91
TGA1tA(UGC)A FBP26P32604 452 aa9.39□□□□□ -0.91
TGA1tA(UGC)A UIP5P36137 443 aa9.39□□□□□ -0.91
TGA1tA(UGC)A FMS1P50264 508 aa9.39□□□□□ -0.91
TGA1tA(UGC)A PTA1Q01329 785 aaPredicted RBP9.39□□□□□ -0.91
TGA1tA(UGC)A SEC20P28791 383 aa9.38□□□□□ -0.91
TGA1tA(UGC)A PAN5P38787 379 aa9.38□□□□□ -0.91
TGA1tA(UGC)A AKR1P39010 764 aa9.38□□□□□ -0.91
TGA1tA(UGC)A YJR107WP47145 328 aa9.38□□□□□ -0.91
TGA1tA(UGC)A LIF1P53150 421 aa9.38□□□□□ -0.91
TGA1tA(UGC)A SLD5Q03406 294 aa9.38□□□□□ -0.91
TGA1tA(UGC)A VIP1Q06685 1146 aaKnown RBP9.38□□□□□ -0.91
TGA1tA(UGC)A MATALPHA2P0CY08 210 aa9.37□□□□□ -0.91
TGA1tA(UGC)A HMLALPHA2P0CY09 210 aa9.37□□□□□ -0.91
TGA1tA(UGC)A POX1P13711 748 aa9.37□□□□□ -0.91
TGA1tA(UGC)A NOC2P39744 710 aaKnown RBP9.37□□□□□ -0.91
TGA1tA(UGC)A CLA4P48562 842 aa9.37□□□□□ -0.91
TGA1tA(UGC)A ESF1Q06344 628 aaKnown RBP9.37□□□□□ -0.91
TGA1tA(UGC)A MCM4P30665 933 aaKnown RBP9.36□□□□□ -0.91
TGA1tA(UGC)A TIM23P32897 222 aa9.36□□□□□ -0.91
TGA1tA(UGC)A TFC4P33339 1025 aa9.36□□□□□ -0.91
TGA1tA(UGC)A FIR1P40020 876 aa9.36□□□□□ -0.91
TGA1tA(UGC)A VID28P40547 921 aa9.36□□□□□ -0.91
TGA1tA(UGC)A ASE1P50275 885 aa9.36□□□□□ -0.91
TGA1tA(UGC)A WHI4Q07655 649 aaKnown RBP9.36□□□□□ -0.91
TGA1tA(UGC)A MSC6Q08818 692 aaKnown RBP9.36□□□□□ -0.91
TGA1tA(UGC)A TRM11Q12463 433 aa9.36□□□□□ -0.91
TGA1tA(UGC)A YDR461C-AQ2V2P7 80 aa9.36□□□□□ -0.91
TGA1tA(UGC)A PDC1P06169 563 aaKnown RBP9.35□□□□□ -0.91
TGA1tA(UGC)A SEC8P32855 1065 aa9.35□□□□□ -0.91
TGA1tA(UGC)A REG2P38232 338 aa9.35□□□□□ -0.91
TGA1tA(UGC)A SKP2P42843 763 aa9.35□□□□□ -0.91
TGA1tA(UGC)A YPL034WQ03083 165 aa9.35□□□□□ -0.91
TGA1tA(UGC)A TY1B-AO13527 1196 aaKnown RBP9.34□□□□□ -0.91
TGA1tA(UGC)A CIT1P00890 479 aa9.34□□□□□ -0.91
TGA1tA(UGC)A MET6P05694 767 aaKnown RBP9.34□□□□□ -0.91
TGA1tA(UGC)A RPL8AP17076 256 aaKnown RBP9.34□□□□□ -0.91
TGA1tA(UGC)A RXT2P38255 430 aa9.34□□□□□ -0.91
TGA1tA(UGC)A FMP30Q02883 468 aa9.34□□□□□ -0.91
TGA1tA(UGC)A YDR341CQ05506 607 aaKnown RBP9.34□□□□□ -0.91
TGA1tA(UGC)A YLR407WQ06070 228 aa9.34□□□□□ -0.91
TGA1tA(UGC)A STI1P15705 589 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
TGA1tA(UGC)A SWI4P25302 1093 aaKnown RBP9.33□□□□□ -0.92
TGA1tA(UGC)A BMH2P34730 273 aaKnown RBP9.33□□□□□ -0.92
TGA1tA(UGC)A WHI3P34761 661 aaKnown RBP9.33□□□□□ -0.92
TGA1tA(UGC)A FLR1P38124 548 aa9.33□□□□□ -0.92
TGA1tA(UGC)A CCT3P39077 534 aaKnown RBP9.33□□□□□ -0.92
TGA1tA(UGC)A TPM2P40414 161 aa9.33□□□□□ -0.92
TGA1tA(UGC)A PCI8P40512 444 aa9.33□□□□□ -0.92
TGA1tA(UGC)A VPS53P47061 822 aa9.33□□□□□ -0.92
TGA1tA(UGC)A YGL138CP53122 345 aa9.33□□□□□ -0.92
TGA1tA(UGC)A UBP10P53874 792 aaPredicted RBP9.33□□□□□ -0.92
TGA1tA(UGC)A MAM3Q12296 706 aa9.33□□□□□ -0.92
TGA1tA(UGC)A RKM4Q12504 494 aa9.33□□□□□ -0.92
TGA1tA(UGC)A MAK11P20484 414 aaKnown RBP9.32□□□□□ -0.92
TGA1tA(UGC)A YFL040WP43562 540 aa9.32□□□□□ -0.92
TGA1tA(UGC)A EPL1P43572 832 aa9.32□□□□□ -0.92
TGA1tA(UGC)A KTR2P33550 425 aa9.31□□□□□ -0.92
TGA1tA(UGC)A OPY1P38271 328 aa9.31□□□□□ -0.92
TGA1tA(UGC)A SUL1P38359 859 aa9.31□□□□□ -0.92
TGA1tA(UGC)A DAK1P54838 584 aaKnown RBP9.31□□□□□ -0.92
TGA1tA(UGC)A TSR3Q12094 313 aaKnown RBP9.31□□□□□ -0.92
TGA1tA(UGC)A LDB19Q12502 818 aa9.31□□□□□ -0.92
TGA1tA(UGC)A RIF1P29539 1916 aa9.31□□□□□ -0.92
TGA1tA(UGC)A YKE2P52553 114 aa9.3□□□□□ -0.92
TGA1tA(UGC)A ORC4P54791 529 aa9.3□□□□□ -0.92
TGA1tA(UGC)A GDE1Q02979 1223 aa9.3□□□□□ -0.92
TGA1tA(UGC)A ARP6Q12509 438 aa9.3□□□□□ -0.92
TGA1tA(UGC)A CBP3P21560 335 aa9.29□□□□□ -0.92
TGA1tA(UGC)A KIN82P25341 720 aa9.29□□□□□ -0.92
TGA1tA(UGC)A UBP11P36026 717 aa9.29□□□□□ -0.92
TGA1tA(UGC)A RPS7BP48164 190 aaKnown RBP9.29□□□□□ -0.92
TGA1tA(UGC)A OYE2Q03558 400 aaKnown RBP9.29□□□□□ -0.92
TGA1tA(UGC)A RNR2P09938 399 aaKnown RBP9.28□□□□□ -0.92
TGA1tA(UGC)A SIS2P36024 562 aa9.28□□□□□ -0.92
TGA1tA(UGC)A GPT2P36148 743 aa9.28□□□□□ -0.92
TGA1tA(UGC)A RPN10P38886 268 aaKnown RBP9.28□□□□□ -0.92
TGA1tA(UGC)A RET3P53600 189 aa9.28□□□□□ -0.92
TGA1tA(UGC)A UBR2Q07963 1872 aa9.28□□□□□ -0.92
TGA1tA(UGC)A CDC6P09119 513 aa9.27□□□□□ -0.93
TGA1tA(UGC)A MAS2P11914 482 aa9.27□□□□□ -0.93
TGA1tA(UGC)A MIP1P15801 1254 aa9.27□□□□□ -0.93
TGA1tA(UGC)A VPS1P21576 704 aaKnown RBP9.27□□□□□ -0.93
TGA1tA(UGC)A SRO9P25567 434 aaKnown RBP9.27□□□□□ -0.93
TGA1tA(UGC)A PWP2P25635 923 aaKnown RBP9.27□□□□□ -0.93
TGA1tA(UGC)A CLB5P30283 435 aa9.27□□□□□ -0.93
TGA1tA(UGC)A KRI1P42846 591 aaKnown RBP9.27□□□□□ -0.93
TGA1tA(UGC)A CIT3P43635 486 aa9.27□□□□□ -0.93
TGA1tA(UGC)A OXR1Q08952 273 aa9.27□□□□□ -0.93
TGA1tA(UGC)A RTP1Q12751 981 aa9.27□□□□□ -0.93
TGA1tA(UGC)A YDR524C-BQ3E6R4 66 aa9.27□□□□□ -0.93
TGA1tA(UGC)A HEM1P09950 548 aaPredicted RBP9.26□□□□□ -0.93
TGA1tA(UGC)A SNA3P14359 133 aa9.26□□□□□ -0.93
TGA1tA(UGC)A RPC31P17890 251 aa9.26□□□□□ -0.93
TGA1tA(UGC)A ESS1P22696 170 aa9.26□□□□□ -0.93
TGA1tA(UGC)A GRS1P38088 690 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms