RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W SUM1P46676 1062 aa4.37□□□□□ -1.71
SRO7YPR032W VAC14Q06708 880 aa4.37□□□□□ -1.71
SRO7YPR032W PSR1Q07800 427 aa4.37□□□□□ -1.71
SRO7YPR032W GPN2Q08726 347 aaPredicted RBP4.37□□□□□ -1.71
SRO7YPR032W OCA6Q12454 224 aa4.37□□□□□ -1.71
SRO7YPR032W LAM1P38851 1228 aa4.37□□□□□ -1.71
SRO7YPR032W YLR407WQ06070 228 aa4.37□□□□□ -1.71
SRO7YPR032W ATG26Q06321 1198 aa4.37□□□□□ -1.71
SRO7YPR032W TSR1Q07381 788 aaKnown RBP4.37□□□□□ -1.71
SRO7YPR032W CFT2Q12102 859 aaPredicted RBP4.37□□□□□ -1.71
SRO7YPR032W TOM70P07213 617 aaKnown RBP4.37□□□□□ -1.71
SRO7YPR032W SMF1P38925 575 aa4.37□□□□□ -1.71
SRO7YPR032W SYG1P40528 902 aa4.37□□□□□ -1.71
SRO7YPR032W SPC24Q04477 213 aa4.37□□□□□ -1.71
SRO7YPR032W MMR1Q06324 491 aa4.37□□□□□ -1.71
SRO7YPR032W NOB1Q08444 459 aaKnown RBP4.37□□□□□ -1.71
SRO7YPR032W MET4P32389 672 aa4.36□□□□□ -1.71
SRO7YPR032W NAB3P38996 802 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
SRO7YPR032W YIR042CP40586 236 aa4.36□□□□□ -1.71
SRO7YPR032W MTR4P47047 1073 aaKnown RBP4.36□□□□□ -1.71
SRO7YPR032W BET4Q00618 327 aa4.36□□□□□ -1.71
SRO7YPR032W NGL3Q03210 505 aa4.36□□□□□ -1.71
SRO7YPR032W POB3Q04636 552 aaKnown RBP4.36□□□□□ -1.71
SRO7YPR032W DNL4Q08387 944 aaPredicted RBP4.36□□□□□ -1.71
SRO7YPR032W LEU2P04173 364 aaPredicted RBP4.36□□□□□ -1.71
SRO7YPR032W PDC1P06169 563 aaKnown RBP4.36□□□□□ -1.71
SRO7YPR032W RAD53P22216 821 aa4.36□□□□□ -1.71
SRO7YPR032W RAD24P32641 659 aa4.36□□□□□ -1.71
SRO7YPR032W SCS2P40075 244 aaKnown RBP4.36□□□□□ -1.71
SRO7YPR032W ERG5P54781 538 aa4.36□□□□□ -1.71
SRO7YPR032W YPL109CQ02981 657 aa4.36□□□□□ -1.71
SRO7YPR032W YLH47Q06493 454 aa4.36□□□□□ -1.71
SRO7YPR032W MPC54Q08550 464 aa4.36□□□□□ -1.71
SRO7YPR032W MATALPHA2P0CY08 210 aa4.35□□□□□ -1.71
SRO7YPR032W HMLALPHA2P0CY09 210 aa4.35□□□□□ -1.71
SRO7YPR032W PYC1P11154 1178 aaKnown RBP4.35□□□□□ -1.71
SRO7YPR032W LOS1P33418 1100 aaPredicted RBP4.35□□□□□ -1.71
SRO7YPR032W SHC1P39000 512 aa4.35□□□□□ -1.71
SRO7YPR032W SAP185P40856 1058 aa4.35□□□□□ -1.71
SRO7YPR032W RBL2P48606 106 aaKnown RBP4.35□□□□□ -1.71
SRO7YPR032W TEL2P53038 688 aa4.35□□□□□ -1.71
SRO7YPR032W YKR005CQ02203 525 aa4.35□□□□□ -1.71
SRO7YPR032W SPN1Q06505 410 aaPredicted RBP4.35□□□□□ -1.71
SRO7YPR032W SLK19Q08581 821 aaKnown RBP4.35□□□□□ -1.71
SRO7YPR032W HMI1Q12039 706 aa4.35□□□□□ -1.71
SRO7YPR032W IOC2Q12072 812 aa4.35□□□□□ -1.71
SRO7YPR032W GNT1Q12096 491 aa4.35□□□□□ -1.71
SRO7YPR032W YPR089WO13585 888 aa4.35□□□□□ -1.71
SRO7YPR032W SUI3P09064 285 aaKnown RBP4.35□□□□□ -1.71
SRO7YPR032W MCM4P30665 933 aaKnown RBP4.35□□□□□ -1.71
SRO7YPR032W GCD6P32501 712 aaKnown RBP4.35□□□□□ -1.71
SRO7YPR032W GCG1P32656 232 aaKnown RBP4.35□□□□□ -1.71
SRO7YPR032W VPS35P34110 944 aa4.35□□□□□ -1.71
SRO7YPR032W ECM21P38167 1117 aaKnown RBP4.35□□□□□ -1.71
SRO7YPR032W EFM2P38347 419 aa4.35□□□□□ -1.71
SRO7YPR032W BOI2P39969 1040 aa4.35□□□□□ -1.71
SRO7YPR032W FAP1P53971 965 aa4.35□□□□□ -1.71
SRO7YPR032W VPS16Q03308 798 aa4.35□□□□□ -1.71
SRO7YPR032W VAM6Q07468 1049 aa4.35□□□□□ -1.71
SRO7YPR032W FKS3Q04952 1785 aa4.35□□□□□ -1.71
SRO7YPR032W RPB2P08518 1224 aaKnown RBP4.35□□□□□ -1.71
SRO7YPR032W PDR1P12383 1068 aa4.35□□□□□ -1.71
SRO7YPR032W HSC82P15108 705 aaKnown RBP4.35□□□□□ -1.71
SRO7YPR032W ESBP6P53918 673 aa4.35□□□□□ -1.71
SRO7YPR032W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SRO7YPR032W OSW1Q08692 278 aa4.35□□□□□ -1.71
SRO7YPR032W ADH4P10127 382 aa4.34□□□□□ -1.71
SRO7YPR032W PGI1P12709 554 aaKnown RBP4.34□□□□□ -1.71
SRO7YPR032W HXT1P32465 570 aa4.34□□□□□ -1.71
SRO7YPR032W HEK2P38199 381 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71 RIP-Chip
SRO7YPR032W HSM3P38348 480 aa4.34□□□□□ -1.71
SRO7YPR032W ZDS1P50111 915 aaKnown RBP4.34□□□□□ -1.71
SRO7YPR032W MRPS35P53292 345 aa4.34□□□□□ -1.71
SRO7YPR032W TIM11P81449 96 aaPredicted RBP4.34□□□□□ -1.71
SRO7YPR032W TAF10Q12030 206 aa4.34□□□□□ -1.71
SRO7YPR032W SNA3P14359 133 aa4.34□□□□□ -1.72
SRO7YPR032W YCR051WP25631 222 aa4.34□□□□□ -1.72
SRO7YPR032W SEC8P32855 1065 aa4.34□□□□□ -1.72
SRO7YPR032W ATO2P32907 282 aa4.34□□□□□ -1.72
SRO7YPR032W PIM1P36775 1133 aa4.34□□□□□ -1.72
SRO7YPR032W AKL1P38080 1108 aaKnown RBP4.34□□□□□ -1.72
SRO7YPR032W FAR11P53917 953 aa4.34□□□□□ -1.72
SRO7YPR032W BRE1Q07457 700 aaKnown RBP4.34□□□□□ -1.72
SRO7YPR032W NEW1Q08972 1196 aaKnown RBP4.34□□□□□ -1.72
SRO7YPR032W SPO11P23179 398 aa4.33□□□□□ -1.72
SRO7YPR032W VAN1P23642 535 aa4.33□□□□□ -1.72
SRO7YPR032W RIB7P33312 244 aa4.33□□□□□ -1.72
SRO7YPR032W YKL091CP33324 310 aaKnown RBP4.33□□□□□ -1.72
SRO7YPR032W PET112P33893 541 aa4.33□□□□□ -1.72
SRO7YPR032W NTH2P35172 780 aa4.33□□□□□ -1.72
SRO7YPR032W DBP7P36120 742 aaKnown RBP4.33□□□□□ -1.72
SRO7YPR032W NOC2P39744 710 aaKnown RBP4.33□□□□□ -1.72
SRO7YPR032W YJR039WP47107 1121 aa4.33□□□□□ -1.72
SRO7YPR032W HFM1P51979 1187 aa4.33□□□□□ -1.72
SRO7YPR032W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72 RIP-Chip
SRO7YPR032W RSM24Q03976 319 aa4.33□□□□□ -1.72
SRO7YPR032W SXM1Q04175 944 aaKnown RBP4.33□□□□□ -1.72
SRO7YPR032W SPP382Q06411 708 aaPredicted RBP4.33□□□□□ -1.72
SRO7YPR032W CDC8P00572 216 aa4.33□□□□□ -1.72
SRO7YPR032W CKI1P20485 582 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 73.9 ms