RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C EBS1Q03466 884 aaKnown RBP10.34□□□□□ -0.75
SPT20YOL148C STE20Q03497 939 aaKnown RBP10.34□□□□□ -0.75
SPT20YOL148C SPC24Q04477 213 aa10.34□□□□□ -0.75
SPT20YOL148C EST2Q06163 884 aa10.34□□□□□ -0.75
SPT20YOL148C PIF1P07271 859 aa10.33□□□□□ -0.76
SPT20YOL148C YMR085WP0CF18 432 aa10.33□□□□□ -0.76
SPT20YOL148C RCR1P38212 213 aa10.33□□□□□ -0.76
SPT20YOL148C BCD1P38772 366 aa10.33□□□□□ -0.76
SPT20YOL148C TIF4632P39936 914 aaKnown RBP10.33□□□□□ -0.76
SPT20YOL148C ZPR1P53303 486 aaKnown RBP10.33□□□□□ -0.76
SPT20YOL148C CSC1Q06538 782 aa10.33□□□□□ -0.76
SPT20YOL148C YLR001CQ07895 862 aa10.33□□□□□ -0.76
SPT20YOL148C SLP1Q12232 587 aa10.33□□□□□ -0.76
SPT20YOL148C RPB2P08518 1224 aaKnown RBP10.33□□□□□ -0.76
SPT20YOL148C MCM3P24279 971 aaKnown RBP10.33□□□□□ -0.76
SPT20YOL148C SIP3P38717 1229 aa10.33□□□□□ -0.76
SPT20YOL148C VFA1P40080 203 aa10.33□□□□□ -0.76
SPT20YOL148C MFM1Q02783 413 aa10.33□□□□□ -0.76
SPT20YOL148C UME1Q03010 460 aa10.33□□□□□ -0.76
SPT20YOL148C YLR177WQ06251 628 aa10.33□□□□□ -0.76
SPT20YOL148C SPN1Q06505 410 aaPredicted RBP10.33□□□□□ -0.76
SPT20YOL148C INP54Q08227 384 aaKnown RBP10.33□□□□□ -0.76
SPT20YOL148C GET3Q12154 354 aaKnown RBP10.33□□□□□ -0.76
SPT20YOL148C LAM4P38800 1345 aa10.32□□□□□ -0.76
SPT20YOL148C AI2P03876 854 aa10.32□□□□□ -0.76
SPT20YOL148C MET1P36150 593 aa10.32□□□□□ -0.76
SPT20YOL148C CRG1P38892 291 aaRIP-Chip data10.32□□□□□ -0.76not detected
SPT20YOL148C YML119WQ03208 357 aa10.32□□□□□ -0.76
SPT20YOL148C SOV1Q04748 898 aa10.32□□□□□ -0.76
SPT20YOL148C APL5Q08951 932 aaKnown RBP10.32□□□□□ -0.76
SPT20YOL148C UTP10P42945 1769 aaKnown RBP10.32□□□□□ -0.76
SPT20YOL148C RSF2P46974 1380 aa10.31□□□□□ -0.76
SPT20YOL148C ARG4P04076 463 aaPredicted RBP10.31□□□□□ -0.76
SPT20YOL148C TOM70P07213 617 aaKnown RBP10.31□□□□□ -0.76
SPT20YOL148C BMH2P34730 273 aaKnown RBP10.31□□□□□ -0.76
SPT20YOL148C IAH1P41734 238 aa10.31□□□□□ -0.76
SPT20YOL148C SNU71P53207 620 aaKnown RBP10.31□□□□□ -0.76
SPT20YOL148C BET4Q00618 327 aa10.31□□□□□ -0.76
SPT20YOL148C PKH3Q03306 898 aaPredicted RBP10.31□□□□□ -0.76
SPT20YOL148C GRX3Q03835 250 aa10.31□□□□□ -0.76
SPT20YOL148C ARO80Q04052 950 aa10.31□□□□□ -0.76
SPT20YOL148C FAR8Q05040 523 aa10.31□□□□□ -0.76
SPT20YOL148C TAF10Q12030 206 aa10.31□□□□□ -0.76
SPT20YOL148C CDC6P09119 513 aa10.3□□□□□ -0.76
SPT20YOL148C OAF3P36023 863 aa10.3□□□□□ -0.76
SPT20YOL148C AKR1P39010 764 aa10.3□□□□□ -0.76
SPT20YOL148C HFM1P51979 1187 aa10.3□□□□□ -0.76
SPT20YOL148C YPL109CQ02981 657 aa10.3□□□□□ -0.76
SPT20YOL148C MTC5Q03897 1148 aa10.3□□□□□ -0.76
SPT20YOL148C ITT1Q04638 464 aa10.3□□□□□ -0.76
SPT20YOL148C MMR1Q06324 491 aa10.3□□□□□ -0.76
SPT20YOL148C OPY2Q06810 360 aa10.3□□□□□ -0.76
SPT20YOL148C SLM3Q12093 417 aa10.3□□□□□ -0.76
SPT20YOL148C NBL1Q3E7Y6 73 aa10.3□□□□□ -0.76
SPT20YOL148C SEC18P18759 758 aaKnown RBP10.3□□□□□ -0.76
SPT20YOL148C SWI4P25302 1093 aaKnown RBP10.3□□□□□ -0.76
SPT20YOL148C PDC6P26263 563 aaKnown RBP10.3□□□□□ -0.76
SPT20YOL148C UBC6P33296 250 aaPredicted RBP10.3□□□□□ -0.76
SPT20YOL148C HEK2P38199 381 aaKnown RBP RIP-Chip data10.3□□□□□ -0.76not detected
SPT20YOL148C YMR147WP40218 223 aaKnown RBP10.3□□□□□ -0.76
SPT20YOL148C RSA3Q05942 220 aaKnown RBP10.3□□□□□ -0.76
SPT20YOL148C NOB1Q08444 459 aaKnown RBP10.3□□□□□ -0.76
SPT20YOL148C SLK19Q08581 821 aaKnown RBP10.3□□□□□ -0.76
SPT20YOL148C IME1P21190 360 aa10.29□□□□□ -0.76
SPT20YOL148C GCG1P32656 232 aaKnown RBP10.29□□□□□ -0.76
SPT20YOL148C LIN1P38852 340 aaPredicted RBP10.29□□□□□ -0.76
SPT20YOL148C URH1Q04179 340 aa10.29□□□□□ -0.76
SPT20YOL148C YMR114CQ04471 368 aaKnown RBP10.29□□□□□ -0.76
SPT20YOL148C ORM2Q06144 216 aa10.29□□□□□ -0.76
SPT20YOL148C MAG2Q06436 670 aaKnown RBP10.29□□□□□ -0.76
SPT20YOL148C TAH18Q12181 623 aa10.29□□□□□ -0.76
SPT20YOL148C PRP4P20053 465 aaKnown RBP10.28□□□□□ -0.76
SPT20YOL148C VAN1P23642 535 aa10.28□□□□□ -0.76
SPT20YOL148C ASF1P32447 279 aa10.28□□□□□ -0.76
SPT20YOL148C HXT1P32465 570 aa10.28□□□□□ -0.76
SPT20YOL148C RER2P35196 286 aa10.28□□□□□ -0.76
SPT20YOL148C CCT2P39076 527 aaKnown RBP10.28□□□□□ -0.76
SPT20YOL148C AIP1P46680 615 aaKnown RBP10.28□□□□□ -0.76
SPT20YOL148C YJR039WP47107 1121 aa10.28□□□□□ -0.76
SPT20YOL148C PKH1Q03407 766 aa10.28□□□□□ -0.76
SPT20YOL148C SPP382Q06411 708 aaPredicted RBP10.28□□□□□ -0.76
SPT20YOL148C CSR1Q06705 408 aaKnown RBP10.28□□□□□ -0.76
SPT20YOL148C SNU66Q12420 587 aaPredicted RBP10.28□□□□□ -0.76
SPT20YOL148C PPR1P07272 904 aaPredicted RBP10.28□□□□□ -0.76
SPT20YOL148C KEX2P13134 814 aa10.28□□□□□ -0.76
SPT20YOL148C RPL5P26321 297 aaKnown RBP10.28□□□□□ -0.76
SPT20YOL148C UBP14P38237 781 aaKnown RBP10.28□□□□□ -0.76
SPT20YOL148C PIH1P38768 344 aa10.28□□□□□ -0.76
SPT20YOL148C TMA22P47089 198 aaPredicted RBP10.28□□□□□ -0.76
SPT20YOL148C LSC2P53312 427 aa10.28□□□□□ -0.76
SPT20YOL148C YNL193WP53870 558 aa10.28□□□□□ -0.76
SPT20YOL148C YNL144CP53907 740 aa10.28□□□□□ -0.76
SPT20YOL148C INP2Q03824 705 aa10.28□□□□□ -0.76
SPT20YOL148C YKU80Q04437 629 aa10.28□□□□□ -0.76
SPT20YOL148C YLR271WQ06152 274 aa10.28□□□□□ -0.76
SPT20YOL148C VPS1P21576 704 aaKnown RBP10.27□□□□□ -0.77
SPT20YOL148C PSO2P30620 661 aa10.27□□□□□ -0.77
SPT20YOL148C MDJ2P42834 146 aa10.27□□□□□ -0.77
SPT20YOL148C YSH1Q06224 779 aaPredicted RBP10.27□□□□□ -0.77
SPT20YOL148C PSR2Q07949 397 aa10.27□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms