RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	NAF1	P53919	492 aa	Known RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	PKH1	Q03407	766 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	PSR1	Q07800	427 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	VMA1	P17255	1071 aa	Known RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	BET2	P20133	325 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	MSH3	P25336	1018 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	CSE4	P36012	229 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	RRP14	P36080	434 aa	Known RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	GUA1	P38625	525 aa	Known RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	FAF1	P40546	346 aa	Predicted RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	IOC3	P43596	787 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	YPP1	P46951	817 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	YBP2	P53169	641 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	SKY1	Q03656	742 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	YLR281C	Q05863	155 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	YLR326W	Q06170	240 aa	Known RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	PEX19	Q07418	342 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	HSP104	P31539	908 aa	Known RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	SPT16	P32558	1035 aa	Known RBP	1.74	□□□□□ -2.13
SSK2	YNR031C	MET13	P53128	600 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	SPO71	Q03868	1245 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	PSK2	Q08217	1101 aa		1.74	□□□□□ -2.13
SSK2	YNR031C	CIT2	P08679	460 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	RKM3	P38222	552 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	AFG3	P39925	761 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	OSW7	P43611	510 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	TCB2	P48231	1178 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	KIP3	P53086	805 aa	Known RBP	1.73	□□□□□ -2.13
SSK2	YNR031C	DNM1	P54861	757 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	YML020W	Q03722	664 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	RPL43A	P0CX25	92 aa	Known RBP	1.73	□□□□□ -2.13
SSK2	YNR031C	RPL43B	P0CX26	92 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	KEX2	P13134	814 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	RPA135	P22138	1203 aa	Known RBP	1.73	□□□□□ -2.13
SSK2	YNR031C	PUP2	P32379	260 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	BUD2	P33314	1104 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	MAF1	P41910	395 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	VPS53	P47061	822 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	MPP10	P47083	593 aa	Known RBP	1.73	□□□□□ -2.13
SSK2	YNR031C	YDR524C-B	Q3E6R4	66 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	RAD50	P12753	1312 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	1.73	□□□□□ -2.13	not detected
SSK2	YNR031C	HOM2	P13663	365 aa	Known RBP	1.73	□□□□□ -2.13
SSK2	YNR031C	COQ8	P27697	501 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	OCT1	P35999	772 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	LEU5	P38702	357 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	DSD1	P53095	428 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	PAP2	P53632	584 aa	Known RBP	1.73	□□□□□ -2.13
SSK2	YNR031C	GDE1	Q02979	1223 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	SYF1	Q04048	859 aa	Predicted RBP	1.73	□□□□□ -2.13
SSK2	YNR031C	LCD1	Q04377	747 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	AOS1	Q06624	347 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	SSP2	Q08646	371 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	SAM3	Q08986	587 aa		1.73	□□□□□ -2.13
SSK2	YNR031C	PIM1	P36775	1133 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	CSM2	P40465	213 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	YSH1	Q06224	779 aa	Predicted RBP	1.72	□□□□□ -2.13
SSK2	YNR031C	PLP2	Q12017	286 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	PSF3	Q12146	194 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	CCP1	P00431	361 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	EST1	P17214	699 aa	Predicted RBP	1.72	□□□□□ -2.13
SSK2	YNR031C	PWP2	P25635	923 aa	Known RBP	1.72	□□□□□ -2.13
SSK2	YNR031C	SPC110	P32380	944 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	PET127	P32606	800 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	RTG1	P32607	177 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	LYS14	P40971	790 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	CIT3	P43635	486 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	TAF1	P46677	1066 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	VTC4	P47075	721 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	1.72	□□□□□ -2.13	not detected
SSK2	YNR031C	BRE5	P53741	515 aa	Known RBP	1.72	□□□□□ -2.13
SSK2	YNR031C	SLP1	Q12232	587 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	YOR097C	Q12274	175 aa	Predicted RBP	1.72	□□□□□ -2.13
SSK2	YNR031C	VPS5	Q92331	675 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	RAD2	P07276	1031 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	SEC15	P22224	910 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	URK1	P27515	501 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	MRF1	P30775	413 aa	Predicted RBP	1.72	□□□□□ -2.13
SSK2	YNR031C	PCA1	P38360	1216 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	PMC1	P38929	1173 aa	Predicted RBP	1.72	□□□□□ -2.13
SSK2	YNR031C	RRP8	P38961	392 aa	Known RBP	1.72	□□□□□ -2.13
SSK2	YNR031C	AIM20	P40451	204 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	RAD17	P48581	401 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	NAN1	Q02931	896 aa	Known RBP	1.72	□□□□□ -2.13
SSK2	YNR031C	CLF1	Q12309	687 aa	Predicted RBP	1.72	□□□□□ -2.13
SSK2	YNR031C	SWI6	P09959	803 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	CMP2	P14747	604 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	PSE1	P32337	1089 aa	Known RBP	1.72	□□□□□ -2.13
SSK2	YNR031C	SMC1	P32908	1225 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	SET3	P36124	751 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	DJP1	P40564	432 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	CUR1	Q06469	252 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	UTP4	Q06679	776 aa	Known RBP	1.72	□□□□□ -2.13
SSK2	YNR031C	PPM2	Q08282	695 aa		1.72	□□□□□ -2.13
SSK2	YNR031C	RPS24A	P0CX31	135 aa	Known RBP	1.71	□□□□□ -2.14
SSK2	YNR031C	RPS24B	P0CX32	135 aa	Known RBP	1.71	□□□□□ -2.14
SSK2	YNR031C	PCK1	P10963	549 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	KCC4	P25389	1037 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	RGT1	P32862	1170 aa		1.71	□□□□□ -2.14
SSK2	YNR031C	APL6	P46682	809 aa		1.71	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms