RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W MRPS18P42847 217 aa6.9□□□□□ -1.3
SSU72YNL222W YNR063WP53749 607 aa6.9□□□□□ -1.3
SSU72YNL222W GCD1P09032 578 aaPredicted RBP6.89□□□□□ -1.31
SSU72YNL222W SEC23P15303 768 aaKnown RBP6.89□□□□□ -1.31
SSU72YNL222W LIP5P32875 414 aa6.89□□□□□ -1.31
SSU72YNL222W RDH54P38086 958 aa6.89□□□□□ -1.31
SSU72YNL222W SDH1Q00711 640 aa6.89□□□□□ -1.31
SSU72YNL222W MCD1Q12158 566 aa6.89□□□□□ -1.31
SSU72YNL222W ASF1P32447 279 aa6.88□□□□□ -1.31
SSU72YNL222W SEC8P32855 1065 aa6.88□□□□□ -1.31
SSU72YNL222W NNK1P36003 928 aa6.88□□□□□ -1.31
SSU72YNL222W ATG14P38270 344 aa6.88□□□□□ -1.31
SSU72YNL222W RCM1P53972 490 aa6.88□□□□□ -1.31
SSU72YNL222W NMD3P38861 518 aaKnown RBP6.87□□□□□ -1.31
SSU72YNL222W CTH1P47976 325 aa6.87□□□□□ -1.31
SSU72YNL222W BRE4Q07660 1125 aa6.87□□□□□ -1.31
SSU72YNL222W DED1P06634 604 aaKnown RBP6.86□□□□□ -1.31
SSU72YNL222W PUB1P32588 453 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
SSU72YNL222W OYE2Q03558 400 aaKnown RBP6.86□□□□□ -1.31
SSU72YNL222W MAG2Q06436 670 aaKnown RBP6.86□□□□□ -1.31
SSU72YNL222W ADD66P36040 267 aa6.85□□□□□ -1.31
SSU72YNL222W SEA4P38164 1038 aa6.85□□□□□ -1.31
SSU72YNL222W OYE3P41816 400 aaPredicted RBP6.85□□□□□ -1.31
SSU72YNL222W TPP1Q03796 238 aa6.85□□□□□ -1.31
SSU72YNL222W RSA3Q05942 220 aaKnown RBP6.85□□□□□ -1.31
SSU72YNL222W YLR257WQ06146 321 aaKnown RBP6.85□□□□□ -1.31
SSU72YNL222W YOR059CQ08448 450 aaKnown RBP6.85□□□□□ -1.31
SSU72YNL222W LAP2Q10740 671 aa6.85□□□□□ -1.31
SSU72YNL222W RET1P22276 1149 aaKnown RBP6.84□□□□□ -1.31
SSU72YNL222W PEP7P32609 515 aa6.84□□□□□ -1.31
SSU72YNL222W HSE1P38753 452 aa6.84□□□□□ -1.31
SSU72YNL222W EST2Q06163 884 aa6.84□□□□□ -1.31
SSU72YNL222W HDA2Q06629 674 aa6.84□□□□□ -1.31
SSU72YNL222W PUS7Q08647 676 aaKnown RBP6.84□□□□□ -1.31
SSU72YNL222W YVC1Q12324 675 aa6.84□□□□□ -1.31
SSU72YNL222W NSI1Q12457 570 aa6.84□□□□□ -1.31
SSU72YNL222W RKM2Q03942 479 aa6.83□□□□□ -1.32
SSU72YNL222W ESF1Q06344 628 aaKnown RBP6.82□□□□□ -1.32
SSU72YNL222W MRL1Q06815 381 aa6.82□□□□□ -1.32
SSU72YNL222W AFG2P32794 780 aa6.81□□□□□ -1.32
SSU72YNL222W ROD1Q02805 837 aa6.81□□□□□ -1.32
SSU72YNL222W QNS1P38795 714 aaKnown RBP6.8□□□□□ -1.32
SSU72YNL222W GCR1P07261 785 aa6.79□□□□□ -1.32
SSU72YNL222W TAF13P11747 167 aa6.79□□□□□ -1.32
SSU72YNL222W IRC24P40580 263 aa6.79□□□□□ -1.32
SSU72YNL222W YJL045WP47052 634 aa6.79□□□□□ -1.32
SSU72YNL222W AVT1P47082 602 aa6.79□□□□□ -1.32
SSU72YNL222W GNP1P48813 663 aa6.79□□□□□ -1.32
SSU72YNL222W HRK1Q08732 759 aaKnown RBP6.79□□□□□ -1.32
SSU72YNL222W TRE1Q08919 783 aa6.79□□□□□ -1.32
SSU72YNL222W PEX7P39108 375 aa6.78□□□□□ -1.32
SSU72YNL222W VPS53P47061 822 aa6.78□□□□□ -1.32
SSU72YNL222W SIW14P53965 281 aa6.78□□□□□ -1.32
SSU72YNL222W PRO1P32264 428 aa6.77□□□□□ -1.33
SSU72YNL222W ALG3P38179 458 aa6.77□□□□□ -1.33
SSU72YNL222W RAT1Q02792 1006 aaKnown RBP6.77□□□□□ -1.33
SSU72YNL222W SSY1Q03770 852 aa6.77□□□□□ -1.33
SSU72YNL222W PTC5Q12511 572 aa6.77□□□□□ -1.33
SSU72YNL222W YHL012WP38709 493 aa6.76□□□□□ -1.33
SSU72YNL222W PTC7P38797 343 aa6.76□□□□□ -1.33
SSU72YNL222W HXT13P39924 564 aa6.76□□□□□ -1.33
SSU72YNL222W HXT17P53631 564 aa6.76□□□□□ -1.33
SSU72YNL222W HXT15P54854 567 aa6.76□□□□□ -1.33
SSU72YNL222W ADP1P25371 1049 aa6.75□□□□□ -1.33
SSU72YNL222W MKK2P32491 506 aa6.75□□□□□ -1.33
SSU72YNL222W GPB2P39717 880 aa6.75□□□□□ -1.33
SSU72YNL222W GTS1P40956 396 aa6.75□□□□□ -1.33
SSU72YNL222W RMD1Q03441 430 aa6.75□□□□□ -1.33
SSU72YNL222W KIP1P28742 1111 aa6.74□□□□□ -1.33
SSU72YNL222W HSP78P33416 811 aa6.74□□□□□ -1.33
SSU72YNL222W SAM35P14693 329 aa6.73□□□□□ -1.33
SSU72YNL222W POL12P38121 705 aaPredicted RBP6.73□□□□□ -1.33
SSU72YNL222W PET112P33893 541 aa6.72□□□□□ -1.33
SSU72YNL222W LRG1P35688 1017 aa6.72□□□□□ -1.33
SSU72YNL222W ENT3P47160 408 aa6.72□□□□□ -1.33
SSU72YNL222W RTT10Q08924 1013 aa6.72□□□□□ -1.33
SSU72YNL222W YSC84P32793 468 aa6.71□□□□□ -1.34
SSU72YNL222W LPX1Q12405 387 aaKnown RBP6.71□□□□□ -1.34
SSU72YNL222W DFG16Q99234 619 aa6.71□□□□□ -1.34
SSU72YNL222W SYP1P25623 870 aaKnown RBP6.7□□□□□ -1.34
SSU72YNL222W SPO21Q12411 609 aa6.7□□□□□ -1.34
SSU72YNL222W RAD27P26793 382 aa6.69□□□□□ -1.34
SSU72YNL222W MDL2P33311 773 aa6.69□□□□□ -1.34
SSU72YNL222W DUT1P33317 147 aa6.69□□□□□ -1.34
SSU72YNL222W RER2P35196 286 aa6.69□□□□□ -1.34
SSU72YNL222W AOS1Q06624 347 aa6.69□□□□□ -1.34
SSU72YNL222W RCL1Q08096 367 aaPredicted RBP6.69□□□□□ -1.34
SSU72YNL222W ELM1P32801 640 aa6.68□□□□□ -1.34
SSU72YNL222W CNN1P43618 361 aa6.68□□□□□ -1.34
SSU72YNL222W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
SSU72YNL222W CDC34P14682 295 aa6.67□□□□□ -1.34
SSU72YNL222W DBP5P20449 482 aaKnown RBP6.67□□□□□ -1.34
SSU72YNL222W MLS1P30952 554 aa6.67□□□□□ -1.34
SSU72YNL222W AIM26P32858 118 aa6.67□□□□□ -1.34
SSU72YNL222W SEG2P34250 1132 aa6.67□□□□□ -1.34
SSU72YNL222W RGD1P38339 666 aa6.67□□□□□ -1.34
SSU72YNL222W YPL260WQ08977 551 aa6.67□□□□□ -1.34
SSU72YNL222W COQ4O13525 335 aa6.66□□□□□ -1.34
SSU72YNL222W SRO9P25567 434 aaKnown RBP6.66□□□□□ -1.34
SSU72YNL222W TNA1P53322 534 aa6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 85.7 ms