RNA–Protein interactions for RNA: YNL007C

SIS1, Transcript of Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p, yeast

Gene SIS1, Length 1,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS1	YNL007C	TOM71	P38825	639 aa	Known RBP	13.97	□□□□□ -0.17
SIS1	YNL007C	NAF1	P53919	492 aa	Known RBP	13.97	□□□□□ -0.17
SIS1	YNL007C	EIS1	Q05050	843 aa	Known RBP	13.97	□□□□□ -0.17
SIS1	YNL007C	DSE3	Q08729	430 aa		13.97	□□□□□ -0.17
SIS1	YNL007C	NUC1	P08466	329 aa		13.96	□□□□□ -0.17
SIS1	YNL007C	SRP54	P20424	541 aa	Known RBP	13.96	□□□□□ -0.17
SIS1	YNL007C	MCM4	P30665	933 aa	Known RBP	13.96	□□□□□ -0.17
SIS1	YNL007C	MIC60	P36112	540 aa		13.96	□□□□□ -0.17
SIS1	YNL007C	MDM1	Q01846	1127 aa		13.96	□□□□□ -0.17
SIS1	YNL007C	JIP4	Q03361	876 aa		13.96	□□□□□ -0.17
SIS1	YNL007C	URA1	P28272	314 aa	Predicted RBP	13.95	□□□□□ -0.18
SIS1	YNL007C	PES4	P39684	611 aa		13.95	□□□□□ -0.18
SIS1	YNL007C	YGL138C	P53122	345 aa		13.95	□□□□□ -0.18
SIS1	YNL007C	YPR148C	Q06523	435 aa		13.95	□□□□□ -0.18
SIS1	YNL007C	RAD53	P22216	821 aa		13.94	□□□□□ -0.18
SIS1	YNL007C	RRM3	P38766	723 aa		13.94	□□□□□ -0.18
SIS1	YNL007C	KEL1	P38853	1164 aa	Known RBP	13.94	□□□□□ -0.18
SIS1	YNL007C	SSL2	Q00578	843 aa		13.94	□□□□□ -0.18
SIS1	YNL007C	ATE1	P16639	503 aa		13.93	□□□□□ -0.18
SIS1	YNL007C	ASH1	P34233	588 aa		13.93	□□□□□ -0.18
SIS1	YNL007C	MRPL10	P36520	322 aa		13.93	□□□□□ -0.18
SIS1	YNL007C	VPS45	P38932	577 aa		13.93	□□□□□ -0.18
SIS1	YNL007C	SNU71	P53207	620 aa	Known RBP	13.93	□□□□□ -0.18
SIS1	YNL007C	SMD2	Q06217	110 aa	Known RBP	13.93	□□□□□ -0.18
SIS1	YNL007C	YOR296W	Q08748	1289 aa		13.93	□□□□□ -0.18
SIS1	YNL007C	LAP2	Q10740	671 aa		13.93	□□□□□ -0.18
SIS1	YNL007C	TIP41	Q12199	356 aa		13.93	□□□□□ -0.18
SIS1	YNL007C	PTC5	Q12511	572 aa		13.93	□□□□□ -0.18
SIS1	YNL007C	SAM2	P19358	384 aa	Known RBP	13.92	□□□□□ -0.18
SIS1	YNL007C	MAK11	P20484	414 aa	Known RBP	13.92	□□□□□ -0.18
SIS1	YNL007C	SPB4	P25808	606 aa	Predicted RBP	13.92	□□□□□ -0.18
SIS1	YNL007C	CUE3	P53137	624 aa	Known RBP	13.92	□□□□□ -0.18
SIS1	YNL007C	PEX29	Q03370	554 aa		13.92	□□□□□ -0.18
SIS1	YNL007C	SPT21	P35209	758 aa		13.91	□□□□□ -0.18
SIS1	YNL007C	CCT3	P39077	534 aa	Known RBP	13.91	□□□□□ -0.18
SIS1	YNL007C	UBP9	P39967	754 aa		13.91	□□□□□ -0.18
SIS1	YNL007C	GIN4	Q12263	1142 aa		13.91	□□□□□ -0.18
SIS1	YNL007C	TUS1	Q06412	1307 aa		13.9	□□□□□ -0.18
SIS1	YNL007C	TUB2	P02557	457 aa	Known RBP	13.9	□□□□□ -0.18
SIS1	YNL007C	GSY2	P27472	705 aa		13.9	□□□□□ -0.18
SIS1	YNL007C	SRP40	P32583	406 aa	Predicted RBP	13.9	□□□□□ -0.18
SIS1	YNL007C	NOC2	P39744	710 aa	Known RBP	13.9	□□□□□ -0.18
SIS1	YNL007C	FYV10	P40492	516 aa		13.9	□□□□□ -0.18
SIS1	YNL007C	RTC4	P53850	401 aa		13.9	□□□□□ -0.18
SIS1	YNL007C	MMR1	Q06324	491 aa		13.9	□□□□□ -0.18
SIS1	YNL007C	MCM3	P24279	971 aa	Known RBP	13.89	□□□□□ -0.19
SIS1	YNL007C	TPS3	P38426	1054 aa	Known RBP	13.89	□□□□□ -0.19
SIS1	YNL007C	ASE1	P50275	885 aa		13.89	□□□□□ -0.19
SIS1	YNL007C	TRS120	Q04183	1289 aa		13.89	□□□□□ -0.19
SIS1	YNL007C	THR4	P16120	514 aa	Known RBP	13.88	□□□□□ -0.19
SIS1	YNL007C	ALG1	P16661	449 aa		13.88	□□□□□ -0.19
SIS1	YNL007C	BMH1	P29311	267 aa	Known RBP	13.88	□□□□□ -0.19
SIS1	YNL007C	MCM2	P29469	868 aa		13.88	□□□□□ -0.19
SIS1	YNL007C	SAC6	P32599	642 aa	Known RBP	13.88	□□□□□ -0.19
SIS1	YNL007C	SAS3	P34218	831 aa		13.88	□□□□□ -0.19
SIS1	YNL007C	TPM2	P40414	161 aa		13.88	□□□□□ -0.19
SIS1	YNL007C	RPL22A	P05749	121 aa	Known RBP	13.87	□□□□□ -0.19
SIS1	YNL007C	SES1	P07284	462 aa	Known RBP	13.87	□□□□□ -0.19
SIS1	YNL007C	SEC20	P28791	383 aa		13.87	□□□□□ -0.19
SIS1	YNL007C	SPR3	P41901	512 aa		13.87	□□□□□ -0.19
SIS1	YNL007C	LSB1	P53281	241 aa		13.87	□□□□□ -0.19
SIS1	YNL007C	YLR225C	Q05948	407 aa	Known RBP	13.87	□□□□□ -0.19
SIS1	YNL007C	VIP1	Q06685	1146 aa	Known RBP	13.87	□□□□□ -0.19
SIS1	YNL007C	MYO1	P08964	1928 aa		13.86	□□□□□ -0.19
SIS1	YNL007C	RPL8A	P17076	256 aa	Known RBP	13.86	□□□□□ -0.19
SIS1	YNL007C	STT3	P39007	718 aa	Known RBP	13.86	□□□□□ -0.19
SIS1	YNL007C	LYS14	P40971	790 aa		13.86	□□□□□ -0.19
SIS1	YNL007C	RET3	P53600	189 aa		13.86	□□□□□ -0.19
SIS1	YNL007C	BNI5	P53890	448 aa	Known RBP	13.86	□□□□□ -0.19
SIS1	YNL007C	SUE1	Q06524	206 aa		13.86	□□□□□ -0.19
SIS1	YNL007C	SLK19	Q08581	821 aa	Known RBP	13.86	□□□□□ -0.19
SIS1	YNL007C	TUF1	P02992	437 aa	Known RBP	13.85	□□□□□ -0.19
SIS1	YNL007C	CDC15	P27636	974 aa		13.85	□□□□□ -0.19
SIS1	YNL007C	DSE4	P53753	1117 aa		13.85	□□□□□ -0.19
SIS1	YNL007C	CSM3	Q04659	317 aa		13.85	□□□□□ -0.19
SIS1	YNL007C	PSR2	Q07949	397 aa		13.85	□□□□□ -0.19
SIS1	YNL007C	HIS4	P00815	799 aa	Known RBP	13.84	□□□□□ -0.19
SIS1	YNL007C	KRS1	P15180	591 aa	Known RBP	13.84	□□□□□ -0.19
SIS1	YNL007C	SDA1	P53313	767 aa	Known RBP	13.84	□□□□□ -0.19
SIS1	YNL007C	TFC8	Q12308	588 aa		13.84	□□□□□ -0.19
SIS1	YNL007C	ERG12	P07277	443 aa		13.83	□□□□□ -0.2
SIS1	YNL007C	PWP2	P25635	923 aa	Known RBP	13.83	□□□□□ -0.2
SIS1	YNL007C	MPE1	P35728	441 aa	Known RBP	13.83	□□□□□ -0.2
SIS1	YNL007C	TIF4631	P39935	952 aa	Known RBP	13.83	□□□□□ -0.2
SIS1	YNL007C	ACA1	P39970	489 aa		13.83	□□□□□ -0.2
SIS1	YNL007C	UTP4	Q06679	776 aa	Known RBP	13.83	□□□□□ -0.2
SIS1	YNL007C	DAK2	P43550	591 aa		13.82	□□□□□ -0.2
SIS1	YNL007C	TAO3	P40468	2376 aa		13.81	□□□□□ -0.2
SIS1	YNL007C	EBP2	P36049	427 aa	Known RBP	13.81	□□□□□ -0.2
SIS1	YNL007C	TFG2	P41896	400 aa	Predicted RBP	13.81	□□□□□ -0.2
SIS1	YNL007C	CIT3	P43635	486 aa		13.81	□□□□□ -0.2
SIS1	YNL007C	SOL4	P53315	255 aa		13.81	□□□□□ -0.2
SIS1	YNL007C	WAR1	Q03631	944 aa		13.81	□□□□□ -0.2
SIS1	YNL007C	ATG32	P40458	529 aa		13.8	□□□□□ -0.2
SIS1	YNL007C	UBA2	P52488	636 aa		13.8	□□□□□ -0.2
SIS1	YNL007C	AFT2	Q08957	416 aa		13.8	□□□□□ -0.2
SIS1	YNL007C	HIR1	P32479	840 aa		13.79	□□□□□ -0.2
SIS1	YNL007C	ORC6	P38826	435 aa		13.79	□□□□□ -0.2
SIS1	YNL007C	YGR153W	P48238	217 aa		13.79	□□□□□ -0.2
SIS1	YNL007C	HCR1	Q05775	265 aa	Known RBP	13.79	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms