RNA–Protein interactions for RNA: YMR258C

ROY1, Transcript of GTPase inhibitor with similarity to F-box proteins, yeast

Gene ROY1, Length 1,662 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROY1	YMR258C	TRE1	Q08919	783 aa		4.13	□□□□□ -1.75
ROY1	YMR258C	NMD3	P38861	518 aa	Known RBP	4.12	□□□□□ -1.75
ROY1	YMR258C	PEX7	P39108	375 aa		4.12	□□□□□ -1.75
ROY1	YMR258C	PIC2	P40035	300 aa		4.12	□□□□□ -1.75
ROY1	YMR258C	PUS7	Q08647	676 aa	Known RBP	4.12	□□□□□ -1.75
ROY1	YMR258C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	RIP-Chip
ROY1	YMR258C	RET1	P22276	1149 aa	Known RBP	4.11	□□□□□ -1.75
ROY1	YMR258C	TPP1	Q03796	238 aa		4.11	□□□□□ -1.75
ROY1	YMR258C	SEC23	P15303	768 aa	Known RBP	4.1	□□□□□ -1.75
ROY1	YMR258C	HSP78	P33416	811 aa		4.1	□□□□□ -1.75
ROY1	YMR258C	POL12	P38121	705 aa	Predicted RBP	4.1	□□□□□ -1.75
ROY1	YMR258C	YGR122W	P53272	402 aa		4.1	□□□□□ -1.75
ROY1	YMR258C	YNR063W	P53749	607 aa		4.1	□□□□□ -1.75
ROY1	YMR258C	SSY1	Q03770	852 aa		4.1	□□□□□ -1.75
ROY1	YMR258C	RSA3	Q05942	220 aa	Known RBP	4.1	□□□□□ -1.75
ROY1	YMR258C	YLR257W	Q06146	321 aa	Known RBP	4.1	□□□□□ -1.75
ROY1	YMR258C	DFG16	Q99234	619 aa		4.1	□□□□□ -1.75
ROY1	YMR258C	ATE1	P16639	503 aa		4.1	□□□□□ -1.75
ROY1	YMR258C	ADP1	P25371	1049 aa		4.1	□□□□□ -1.75
ROY1	YMR258C	ELM1	P32801	640 aa		4.1	□□□□□ -1.75
ROY1	YMR258C	SEG2	P34250	1132 aa		4.1	□□□□□ -1.75
ROY1	YMR258C	IRC24	P40580	263 aa		4.1	□□□□□ -1.75
ROY1	YMR258C	LAP2	Q10740	671 aa		4.1	□□□□□ -1.75
ROY1	YMR258C	PRO1	P32264	428 aa		4.09	□□□□□ -1.76
ROY1	YMR258C	ADD66	P36040	267 aa		4.09	□□□□□ -1.76
ROY1	YMR258C	POL32	P47110	350 aa		4.09	□□□□□ -1.76
ROY1	YMR258C	ORC3	P54790	616 aa		4.09	□□□□□ -1.76
ROY1	YMR258C	RKM2	Q03942	479 aa		4.09	□□□□□ -1.76
ROY1	YMR258C	AOS1	Q06624	347 aa		4.09	□□□□□ -1.76
ROY1	YMR258C	SAM35	P14693	329 aa		4.08	□□□□□ -1.76
ROY1	YMR258C	PRE9	P23638	258 aa	Known RBP	4.08	□□□□□ -1.76
ROY1	YMR258C	ATG14	P38270	344 aa		4.08	□□□□□ -1.76
ROY1	YMR258C	HSE1	P38753	452 aa		4.08	□□□□□ -1.76
ROY1	YMR258C	LPX1	Q12405	387 aa	Known RBP	4.08	□□□□□ -1.76
ROY1	YMR258C	RAD2	P07276	1031 aa		4.07	□□□□□ -1.76
ROY1	YMR258C	CYC8	P14922	966 aa		4.07	□□□□□ -1.76
ROY1	YMR258C	RNQ1	P25367	405 aa		4.07	□□□□□ -1.76
ROY1	YMR258C	AFG2	P32794	780 aa		4.07	□□□□□ -1.76
ROY1	YMR258C	QNS1	P38795	714 aa	Known RBP	4.07	□□□□□ -1.76
ROY1	YMR258C	PTC7	P38797	343 aa		4.07	□□□□□ -1.76
ROY1	YMR258C	RPS26A	P39938	119 aa	Known RBP	4.07	□□□□□ -1.76
ROY1	YMR258C	RPS26B	P39939	119 aa	Known RBP	4.07	□□□□□ -1.76
ROY1	YMR258C	YJL045W	P47052	634 aa		4.07	□□□□□ -1.76
ROY1	YMR258C	ECL1	P48235	211 aa		4.07	□□□□□ -1.76
ROY1	YMR258C	EST2	Q06163	884 aa		4.07	□□□□□ -1.76
ROY1	YMR258C	RRP15	Q06511	250 aa	Predicted RBP	4.07	□□□□□ -1.76
ROY1	YMR258C	MCD1	Q12158	566 aa		4.07	□□□□□ -1.76
ROY1	YMR258C	MRPS18	P42847	217 aa		4.06	□□□□□ -1.76
ROY1	YMR258C	HDA2	Q06629	674 aa		4.06	□□□□□ -1.76
ROY1	YMR258C	HRK1	Q08732	759 aa	Known RBP	4.06	□□□□□ -1.76
ROY1	YMR258C	DED1	P06634	604 aa	Known RBP	4.06	□□□□□ -1.76
ROY1	YMR258C	MGE1	P38523	228 aa		4.06	□□□□□ -1.76
ROY1	YMR258C	YHL012W	P38709	493 aa		4.06	□□□□□ -1.76
ROY1	YMR258C	GTS1	P40956	396 aa		4.06	□□□□□ -1.76
ROY1	YMR258C	VPS53	P47061	822 aa		4.06	□□□□□ -1.76
ROY1	YMR258C	YJR107W	P47145	328 aa		4.06	□□□□□ -1.76
ROY1	YMR258C	SPR28	Q04921	423 aa		4.06	□□□□□ -1.76
ROY1	YMR258C	HEM3	P28789	327 aa		4.05	□□□□□ -1.76
ROY1	YMR258C	MCM2	P29469	868 aa		4.05	□□□□□ -1.76
ROY1	YMR258C	TSA1	P34760	196 aa	Known RBP	4.05	□□□□□ -1.76
ROY1	YMR258C	TAF13	P11747	167 aa		4.04	□□□□□ -1.76
ROY1	YMR258C	GAS1	P22146	559 aa	Known RBP	4.04	□□□□□ -1.76
ROY1	YMR258C	NIT1	P40447	199 aa		4.04	□□□□□ -1.76
ROY1	YMR258C	FYV10	P40492	516 aa		4.04	□□□□□ -1.76
ROY1	YMR258C	MDL2	P33311	773 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	ALG3	P38179	458 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	HXT13	P39924	564 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	GNP1	P48813	663 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	HXT17	P53631	564 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	HXT15	P54854	567 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	ROD1	Q02805	837 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	PTC5	Q12511	572 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	KIP1	P28742	1111 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	YSC84	P32793	468 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	GPB2	P39717	880 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	PRP43	P53131	767 aa	Known RBP	4.03	□□□□□ -1.76
ROY1	YMR258C	SIW14	P53965	281 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	RAT1	Q02792	1006 aa	Known RBP	4.03	□□□□□ -1.76
ROY1	YMR258C	CDA2	Q06703	312 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	RCL1	Q08096	367 aa	Predicted RBP	4.03	□□□□□ -1.76
ROY1	YMR258C	YDL177C	Q12257	170 aa		4.03	□□□□□ -1.76
ROY1	YMR258C	GCR1	P07261	785 aa		4.02	□□□□□ -1.77
ROY1	YMR258C	SRO9	P25567	434 aa	Known RBP	4.02	□□□□□ -1.77
ROY1	YMR258C	MKK2	P32491	506 aa		4.02	□□□□□ -1.77
ROY1	YMR258C	SEC8	P32855	1065 aa		4.01	□□□□□ -1.77
ROY1	YMR258C	AIM26	P32858	118 aa		4.01	□□□□□ -1.77
ROY1	YMR258C	ETP1	P38748	585 aa	Known RBP	4.01	□□□□□ -1.77
ROY1	YMR258C	UBP5	P39944	805 aa		4.01	□□□□□ -1.77
ROY1	YMR258C	MRL1	Q06815	381 aa		4.01	□□□□□ -1.77
ROY1	YMR258C	BAP2	P38084	609 aa		4	□□□□□ -1.77
ROY1	YMR258C	ENT3	P47160	408 aa		4	□□□□□ -1.77
ROY1	YMR258C	HOS3	Q02959	697 aa	Known RBP	4	□□□□□ -1.77
ROY1	YMR258C	RSC58	Q07979	502 aa		4	□□□□□ -1.77
ROY1	YMR258C	MRPL22	P53881	309 aa		3.99	□□□□□ -1.77
ROY1	YMR258C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
ROY1	YMR258C	ESF1	Q06344	628 aa	Known RBP	3.99	□□□□□ -1.77
ROY1	YMR258C	YPL260W	Q08977	551 aa		3.99	□□□□□ -1.77
ROY1	YMR258C	SPO21	Q12411	609 aa		3.99	□□□□□ -1.77
ROY1	YMR258C	COQ4	O13525	335 aa		3.98	□□□□□ -1.77
ROY1	YMR258C	SNF5	P18480	905 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms