RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W MAM1P40065 302 aa2.15□□□□□ -2.06
RTP1YMR185W MTR4P47047 1073 aaKnown RBP2.15□□□□□ -2.06
RTP1YMR185W AVT1P47082 602 aa2.15□□□□□ -2.06
RTP1YMR185W PPT1P53043 513 aa2.15□□□□□ -2.06
RTP1YMR185W ROM1P53046 1155 aa2.15□□□□□ -2.06
RTP1YMR185W YNL050CP53952 270 aa2.15□□□□□ -2.06
RTP1YMR185W RTT109Q07794 436 aa2.15□□□□□ -2.06
RTP1YMR185W ADE6P38972 1358 aaKnown RBP2.15□□□□□ -2.07
RTP1YMR185W LEU2P04173 364 aaPredicted RBP2.15□□□□□ -2.07
RTP1YMR185W NGR1P32831 672 aaKnown RBP2.15□□□□□ -2.07
RTP1YMR185W BSD2P38356 321 aa2.15□□□□□ -2.07
RTP1YMR185W ARI1P53111 347 aaKnown RBP2.15□□□□□ -2.07
RTP1YMR185W CAB1Q04430 367 aa2.15□□□□□ -2.07
RTP1YMR185W COG8Q04632 607 aa2.15□□□□□ -2.07
RTP1YMR185W NOP58Q12499 511 aaKnown RBP2.15□□□□□ -2.07
RTP1YMR185W MRP10O75012 95 aa2.14□□□□□ -2.07
RTP1YMR185W CDC16P09798 840 aa2.14□□□□□ -2.07
RTP1YMR185W SRS2P12954 1174 aa2.14□□□□□ -2.07
RTP1YMR185W MPE1P35728 441 aaKnown RBP2.14□□□□□ -2.07
RTP1YMR185W TGL4P36165 910 aa2.14□□□□□ -2.07
RTP1YMR185W HXT5P38695 592 aa2.14□□□□□ -2.07
RTP1YMR185W DJP1P40564 432 aa2.14□□□□□ -2.07
RTP1YMR185W SKP1P52286 194 aa2.14□□□□□ -2.07
RTP1YMR185W YGR130CP53278 816 aa2.14□□□□□ -2.07
RTP1YMR185W HST1P53685 503 aa2.14□□□□□ -2.07
RTP1YMR185W CTR9P89105 1077 aa2.14□□□□□ -2.07
RTP1YMR185W LCD1Q04377 747 aa2.14□□□□□ -2.07
RTP1YMR185W HIM1Q06674 414 aa2.14□□□□□ -2.07
RTP1YMR185W RLF2Q12495 606 aa2.14□□□□□ -2.07
RTP1YMR185W RPS19AP07280 144 aaKnown RBP2.14□□□□□ -2.07
RTP1YMR185W RPS19BP07281 144 aaPredicted RBP2.14□□□□□ -2.07
RTP1YMR185W ISC10P32645 267 aa2.14□□□□□ -2.07
RTP1YMR185W FIR1P40020 876 aa2.14□□□□□ -2.07
RTP1YMR185W GIP2P40036 548 aa2.14□□□□□ -2.07
RTP1YMR185W KRI1P42846 591 aaKnown RBP2.14□□□□□ -2.07
RTP1YMR185W GYP7P48365 746 aa2.14□□□□□ -2.07
RTP1YMR185W PUF6Q04373 656 aaKnown RBP2.14□□□□□ -2.07
RTP1YMR185W PUN1Q06991 263 aa2.14□□□□□ -2.07
RTP1YMR185W TAF13P11747 167 aa2.14□□□□□ -2.07
RTP1YMR185W CHS2P14180 963 aa2.14□□□□□ -2.07
RTP1YMR185W CPS1P27614 576 aa2.14□□□□□ -2.07
RTP1YMR185W MRPL33P20084 86 aa2.13□□□□□ -2.07
RTP1YMR185W VMA3P25515 160 aa2.13□□□□□ -2.07
RTP1YMR185W PPH3P32345 308 aa2.13□□□□□ -2.07
RTP1YMR185W GCD7P32502 381 aaPredicted RBP2.13□□□□□ -2.07
RTP1YMR185W SFA1P32771 386 aa2.13□□□□□ -2.07
RTP1YMR185W GIP1P38229 639 aa2.13□□□□□ -2.07
RTP1YMR185W YBR287WP38355 427 aa2.13□□□□□ -2.07
RTP1YMR185W CIR1P42940 261 aa2.13□□□□□ -2.07
RTP1YMR185W YOR296WQ08748 1289 aa2.13□□□□□ -2.07
RTP1YMR185W YLR122CQ12312 125 aa2.13□□□□□ -2.07
RTP1YMR185W TRP3P00937 484 aa2.13□□□□□ -2.07
RTP1YMR185W NAM7P30771 971 aaKnown RBP2.13□□□□□ -2.07
RTP1YMR185W ELM1P32801 640 aa2.13□□□□□ -2.07
RTP1YMR185W YKR073CP36153 106 aa2.13□□□□□ -2.07
RTP1YMR185W RKM3P38222 552 aa2.13□□□□□ -2.07
RTP1YMR185W DSD1P53095 428 aa2.13□□□□□ -2.07
RTP1YMR185W CTF4Q01454 927 aa2.13□□□□□ -2.07
RTP1YMR185W NKP2Q06162 153 aa2.13□□□□□ -2.07
RTP1YMR185W SLP1Q12232 587 aa2.13□□□□□ -2.07
RTP1YMR185W RNR2P09938 399 aaKnown RBP2.12□□□□□ -2.07
RTP1YMR185W RPN12P32496 274 aa2.12□□□□□ -2.07
RTP1YMR185W ISW1P38144 1129 aa2.12□□□□□ -2.07
RTP1YMR185W RSM25P40496 264 aa2.12□□□□□ -2.07
RTP1YMR185W NEO1P40527 1151 aa2.12□□□□□ -2.07
RTP1YMR185W HRQ1Q05549 1077 aa2.12□□□□□ -2.07
RTP1YMR185W CYC7P00045 113 aa2.12□□□□□ -2.07
RTP1YMR185W AKL1P38080 1108 aaKnown RBP2.12□□□□□ -2.07
RTP1YMR185W SAF1P38352 637 aa2.12□□□□□ -2.07
RTP1YMR185W TCD1P38756 429 aa2.12□□□□□ -2.07
RTP1YMR185W STU2P46675 888 aa2.12□□□□□ -2.07
RTP1YMR185W ZDS1P50111 915 aaKnown RBP2.12□□□□□ -2.07
RTP1YMR185W INP52P50942 1183 aa2.12□□□□□ -2.07
RTP1YMR185W SUT1P53032 299 aaKnown RBP2.12□□□□□ -2.07
RTP1YMR185W RSC1P53236 928 aa2.12□□□□□ -2.07
RTP1YMR185W PAP2P53632 584 aaKnown RBP2.12□□□□□ -2.07
RTP1YMR185W RCM1P53972 490 aa2.12□□□□□ -2.07
RTP1YMR185W SRT1Q03175 343 aa2.12□□□□□ -2.07
RTP1YMR185W YMR074CQ04773 145 aa2.12□□□□□ -2.07
RTP1YMR185W TTI1P36097 1038 aa2.11□□□□□ -2.07
RTP1YMR185W NSI1Q12457 570 aa2.11□□□□□ -2.07
RTP1YMR185W TRL1P09880 827 aaKnown RBP2.11□□□□□ -2.07
RTP1YMR185W BRN1P38170 754 aa2.11□□□□□ -2.07
RTP1YMR185W PBY1P38254 753 aa2.11□□□□□ -2.07
RTP1YMR185W YNG2P38806 282 aaKnown RBP2.11□□□□□ -2.07
RTP1YMR185W YER156CP40093 338 aaKnown RBP2.11□□□□□ -2.07
RTP1YMR185W NPA3P47122 385 aa2.11□□□□□ -2.07
RTP1YMR185W DSE4P53753 1117 aa2.11□□□□□ -2.07
RTP1YMR185W ESC2Q06340 456 aa2.11□□□□□ -2.07
RTP1YMR185W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
RTP1YMR185W ETT1Q08421 412 aaKnown RBP2.11□□□□□ -2.07
RTP1YMR185W PAN5P38787 379 aa2.11□□□□□ -2.07
RTP1YMR185W CIN4P39110 191 aa2.11□□□□□ -2.07
RTP1YMR185W RVS167P39743 482 aaKnown RBP2.11□□□□□ -2.07
RTP1YMR185W CEP3P40969 608 aa2.11□□□□□ -2.07
RTP1YMR185W CSI1Q04368 295 aa2.11□□□□□ -2.07
RTP1YMR185W UTP10P42945 1769 aaKnown RBP2.1□□□□□ -2.07
RTP1YMR185W BIK1P11709 440 aa2.1□□□□□ -2.07
RTP1YMR185W YBR197CP38306 217 aa2.1□□□□□ -2.07
RTP1YMR185W LEO1P38439 464 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms