RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W LSO1Q3E827 93 aa4.32□□□□□ -1.72
ECM16YMR128W SSK22P25390 1331 aaPredicted RBP4.32□□□□□ -1.72
ECM16YMR128W EPL1P43572 832 aa4.32□□□□□ -1.72
ECM16YMR128W ARP5P53946 755 aa4.32□□□□□ -1.72
ECM16YMR128W SML1Q04964 104 aa4.32□□□□□ -1.72
ECM16YMR128W COG4Q06096 861 aa4.32□□□□□ -1.72
ECM16YMR128W SLM3Q12093 417 aa4.32□□□□□ -1.72
ECM16YMR128W CDC15P27636 974 aa4.31□□□□□ -1.72
ECM16YMR128W NAB2P32505 525 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
ECM16YMR128W RTT107P38850 1070 aa4.31□□□□□ -1.72
ECM16YMR128W ENV11P53246 860 aa4.31□□□□□ -1.72
ECM16YMR128W RRB1Q04225 511 aaKnown RBP4.31□□□□□ -1.72
ECM16YMR128W PNP1Q05788 311 aa4.31□□□□□ -1.72
ECM16YMR128W TSC13Q99190 310 aa4.31□□□□□ -1.72
ECM16YMR128W CST6P40535 587 aa4.31□□□□□ -1.72
ECM16YMR128W ATG1P53104 897 aa4.31□□□□□ -1.72
ECM16YMR128W PHO4P07270 312 aaKnown RBP4.31□□□□□ -1.72
ECM16YMR128W CLB1P24868 471 aa4.31□□□□□ -1.72
ECM16YMR128W MSH1P25846 959 aa4.31□□□□□ -1.72
ECM16YMR128W DEP1P31385 405 aa4.31□□□□□ -1.72
ECM16YMR128W PSH1Q12161 406 aa4.31□□□□□ -1.72
ECM16YMR128W SOH1P38633 127 aa4.3□□□□□ -1.72
ECM16YMR128W RRM3P38766 723 aa4.3□□□□□ -1.72
ECM16YMR128W YNL165WP53891 406 aa4.3□□□□□ -1.72
ECM16YMR128W RPN7Q06103 429 aaKnown RBP4.3□□□□□ -1.72
ECM16YMR128W HDA3Q06623 655 aa4.3□□□□□ -1.72
ECM16YMR128W NCB2Q92317 146 aa4.3□□□□□ -1.72
ECM16YMR128W STM1P39015 273 aaKnown RBP4.3□□□□□ -1.72
ECM16YMR128W XKS1P42826 600 aa4.3□□□□□ -1.72
ECM16YMR128W YPT11P48559 417 aa4.3□□□□□ -1.72
ECM16YMR128W MLC1P53141 149 aa4.3□□□□□ -1.72
ECM16YMR128W FAS2P19097 1887 aaKnown RBP4.3□□□□□ -1.72
ECM16YMR128W TAF13P11747 167 aa4.3□□□□□ -1.72
ECM16YMR128W PET123P17558 318 aa4.3□□□□□ -1.72
ECM16YMR128W PRP5P21372 849 aaPredicted RBP4.3□□□□□ -1.72
ECM16YMR128W PRP45P28004 379 aaPredicted RBP4.3□□□□□ -1.72
ECM16YMR128W NGR1P32831 672 aaKnown RBP4.3□□□□□ -1.72
ECM16YMR128W CTF4Q01454 927 aa4.3□□□□□ -1.72
ECM16YMR128W UBP16Q02863 499 aa4.3□□□□□ -1.72
ECM16YMR128W YLR407WQ06070 228 aa4.3□□□□□ -1.72
ECM16YMR128W FBP26P32604 452 aa4.29□□□□□ -1.72
ECM16YMR128W YBR197CP38306 217 aa4.29□□□□□ -1.72
ECM16YMR128W YMR147WP40218 223 aaKnown RBP4.29□□□□□ -1.72
ECM16YMR128W ADE16P54113 591 aaKnown RBP4.29□□□□□ -1.72
ECM16YMR128W NCR1Q12200 1170 aa4.29□□□□□ -1.72
ECM16YMR128W YRF1-3P0CX14 1859 aa4.29□□□□□ -1.72
ECM16YMR128W YRF1-7P0CX15 1859 aa4.29□□□□□ -1.72
ECM16YMR128W YRF1-6P53819 1859 aa4.29□□□□□ -1.72
ECM16YMR128W COBP00163 385 aa4.29□□□□□ -1.72
ECM16YMR128W TEC1P18412 486 aa4.29□□□□□ -1.72
ECM16YMR128W SEC9P40357 651 aa4.29□□□□□ -1.72
ECM16YMR128W LAM4P38800 1345 aa4.29□□□□□ -1.72
ECM16YMR128W MATALPHA2P0CY08 210 aa4.29□□□□□ -1.72
ECM16YMR128W HMLALPHA2P0CY09 210 aa4.29□□□□□ -1.72
ECM16YMR128W IMP2'P32351 346 aa4.29□□□□□ -1.72
ECM16YMR128W SEC8P32855 1065 aa4.29□□□□□ -1.72
ECM16YMR128W VPS41P38959 992 aa4.29□□□□□ -1.72
ECM16YMR128W SPO22P40511 975 aa4.29□□□□□ -1.72
ECM16YMR128W YJR008WP47085 338 aa4.29□□□□□ -1.72
ECM16YMR128W RPS31P05759 152 aaKnown RBP4.28□□□□□ -1.72
ECM16YMR128W SHM1P37292 490 aaPredicted RBP4.28□□□□□ -1.72
ECM16YMR128W EMW1P42842 904 aaKnown RBP4.28□□□□□ -1.72
ECM16YMR128W DAK2P43550 591 aa4.28□□□□□ -1.72
ECM16YMR128W YNL193WP53870 558 aa4.28□□□□□ -1.72
ECM16YMR128W DUR3P33413 735 aa4.28□□□□□ -1.72
ECM16YMR128W RGD1P38339 666 aa4.28□□□□□ -1.72
ECM16YMR128W NUG1P40010 520 aaKnown RBP4.28□□□□□ -1.72
ECM16YMR128W QDR1P40475 563 aa4.28□□□□□ -1.72
ECM16YMR128W MRS2Q01926 470 aa4.28□□□□□ -1.72
ECM16YMR128W YOL087CQ99247 1116 aa4.28□□□□□ -1.72
ECM16YMR128W VPS1P21576 704 aaKnown RBP4.27□□□□□ -1.73
ECM16YMR128W MRC1P25588 1096 aa4.27□□□□□ -1.73
ECM16YMR128W THI12P42883 340 aa4.27□□□□□ -1.73
ECM16YMR128W THI5P43534 340 aa4.27□□□□□ -1.73
ECM16YMR128W THI11P47183 340 aa4.27□□□□□ -1.73
ECM16YMR128W SFH1Q06168 426 aa4.27□□□□□ -1.73
ECM16YMR128W THI13Q07748 340 aa4.27□□□□□ -1.73
ECM16YMR128W AFT2Q08957 416 aa4.27□□□□□ -1.73
ECM16YMR128W HSP82P02829 709 aaKnown RBP4.27□□□□□ -1.73
ECM16YMR128W RGP1P16664 663 aa4.27□□□□□ -1.73
ECM16YMR128W SEC18P18759 758 aaKnown RBP4.27□□□□□ -1.73
ECM16YMR128W OSM1P21375 501 aaKnown RBP4.27□□□□□ -1.73
ECM16YMR128W YHL017WP38745 532 aa4.27□□□□□ -1.73
ECM16YMR128W RPL34BP40525 121 aaKnown RBP4.27□□□□□ -1.73
ECM16YMR128W RRN7P40992 514 aa4.27□□□□□ -1.73
ECM16YMR128W BUD6P41697 788 aa4.27□□□□□ -1.73
ECM16YMR128W HDA1P53973 706 aa4.27□□□□□ -1.73
ECM16YMR128W PRT1P06103 763 aaKnown RBP4.27□□□□□ -1.73
ECM16YMR128W HCA4P20448 770 aaKnown RBP4.27□□□□□ -1.73
ECM16YMR128W UBC1P21734 215 aaKnown RBP4.27□□□□□ -1.73
ECM16YMR128W RPB10P22139 70 aa4.27□□□□□ -1.73
ECM16YMR128W BUD31P25337 157 aaPredicted RBP4.27□□□□□ -1.73
ECM16YMR128W STO1P34160 861 aaKnown RBP4.27□□□□□ -1.73
ECM16YMR128W CAF130P53280 1122 aaPredicted RBP4.27□□□□□ -1.73
ECM16YMR128W RPL34AP87262 121 aaPredicted RBP4.27□□□□□ -1.73
ECM16YMR128W ETT1Q08421 412 aaKnown RBP4.27□□□□□ -1.73
ECM16YMR128W PXL1P36166 706 aa4.26□□□□□ -1.73
ECM16YMR128W REI1P38344 393 aaPredicted RBP4.26□□□□□ -1.73
ECM16YMR128W DSN1P40568 576 aa4.26□□□□□ -1.73
ECM16YMR128W IOC3P43596 787 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms