RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	RCM1	P53972	490 aa		4.31	□□□□□ -1.72
PKR1	YMR123W	RKM2	Q03942	479 aa		4.31	□□□□□ -1.72
PKR1	YMR123W	NSI1	Q12457	570 aa		4.31	□□□□□ -1.72
PKR1	YMR123W	GLT1	Q12680	2145 aa	Known RBP	4.3	□□□□□ -1.72
PKR1	YMR123W	CYC8	P14922	966 aa		4.3	□□□□□ -1.72
PKR1	YMR123W	PRE9	P23638	258 aa	Known RBP	4.3	□□□□□ -1.72
PKR1	YMR123W	LIP5	P32875	414 aa		4.3	□□□□□ -1.72
PKR1	YMR123W	HSE1	P38753	452 aa		4.3	□□□□□ -1.72
PKR1	YMR123W	OYE3	P41816	400 aa	Predicted RBP	4.3	□□□□□ -1.72
PKR1	YMR123W	MRPS18	P42847	217 aa		4.3	□□□□□ -1.72
PKR1	YMR123W	EAR1	Q03212	550 aa		4.3	□□□□□ -1.72
PKR1	YMR123W	LAP2	Q10740	671 aa		4.3	□□□□□ -1.72
PKR1	YMR123W	RAD2	P07276	1031 aa		4.29	□□□□□ -1.72
PKR1	YMR123W	GCD1	P09032	578 aa	Predicted RBP	4.29	□□□□□ -1.72
PKR1	YMR123W	HEM13	P11353	328 aa	Known RBP	4.29	□□□□□ -1.72
PKR1	YMR123W	ADD66	P36040	267 aa		4.29	□□□□□ -1.72
PKR1	YMR123W	ATG14	P38270	344 aa		4.28	□□□□□ -1.72
PKR1	YMR123W	RPS26A	P39938	119 aa	Known RBP	4.28	□□□□□ -1.72
PKR1	YMR123W	RPS26B	P39939	119 aa	Known RBP	4.28	□□□□□ -1.72
PKR1	YMR123W	RSA3	Q05942	220 aa	Known RBP	4.28	□□□□□ -1.72
PKR1	YMR123W	YLR257W	Q06146	321 aa	Known RBP	4.28	□□□□□ -1.72
PKR1	YMR123W	PUS7	Q08647	676 aa	Known RBP	4.28	□□□□□ -1.72
PKR1	YMR123W	YVC1	Q12324	675 aa		4.28	□□□□□ -1.72
PKR1	YMR123W	RET1	P22276	1149 aa	Known RBP	4.27	□□□□□ -1.73
PKR1	YMR123W	MCM2	P29469	868 aa		4.27	□□□□□ -1.73
PKR1	YMR123W	SEA4	P38164	1038 aa		4.27	□□□□□ -1.73
PKR1	YMR123W	FYV10	P40492	516 aa		4.27	□□□□□ -1.73
PKR1	YMR123W	ENT3	P47160	408 aa		4.27	□□□□□ -1.73
PKR1	YMR123W	SDH1	Q00711	640 aa		4.27	□□□□□ -1.73
PKR1	YMR123W	TPP1	Q03796	238 aa		4.27	□□□□□ -1.73
PKR1	YMR123W	EST2	Q06163	884 aa		4.27	□□□□□ -1.73
PKR1	YMR123W	HRK1	Q08732	759 aa	Known RBP	4.27	□□□□□ -1.73
PKR1	YMR123W	TRE1	Q08919	783 aa		4.27	□□□□□ -1.73
PKR1	YMR123W	PEX7	P39108	375 aa		4.26	□□□□□ -1.73
PKR1	YMR123W	IRC24	P40580	263 aa		4.26	□□□□□ -1.73
PKR1	YMR123W	VPS53	P47061	822 aa		4.26	□□□□□ -1.73
PKR1	YMR123W	RMD1	Q03441	430 aa		4.26	□□□□□ -1.73
PKR1	YMR123W	SPR28	Q04921	423 aa		4.26	□□□□□ -1.73
PKR1	YMR123W	ESF1	Q06344	628 aa	Known RBP	4.26	□□□□□ -1.73
PKR1	YMR123W	HDA2	Q06629	674 aa		4.26	□□□□□ -1.73
PKR1	YMR123W	AFG2	P32794	780 aa		4.25	□□□□□ -1.73
PKR1	YMR123W	SEC8	P32855	1065 aa		4.25	□□□□□ -1.73
PKR1	YMR123W	QNS1	P38795	714 aa	Known RBP	4.25	□□□□□ -1.73
PKR1	YMR123W	GNP1	P48813	663 aa		4.25	□□□□□ -1.73
PKR1	YMR123W	YNR063W	P53749	607 aa		4.25	□□□□□ -1.73
PKR1	YMR123W	SIW14	P53965	281 aa		4.25	□□□□□ -1.73
PKR1	YMR123W	ADP1	P25371	1049 aa		4.24	□□□□□ -1.73
PKR1	YMR123W	ORC3	P54790	616 aa		4.24	□□□□□ -1.73
PKR1	YMR123W	SAM35	P14693	329 aa		4.23	□□□□□ -1.73
PKR1	YMR123W	PRO1	P32264	428 aa		4.23	□□□□□ -1.73
PKR1	YMR123W	HXT13	P39924	564 aa		4.23	□□□□□ -1.73
PKR1	YMR123W	YJL045W	P47052	634 aa		4.23	□□□□□ -1.73
PKR1	YMR123W	HXT17	P53631	564 aa		4.23	□□□□□ -1.73
PKR1	YMR123W	HXT15	P54854	567 aa		4.23	□□□□□ -1.73
PKR1	YMR123W	OYE2	Q03558	400 aa	Known RBP	4.23	□□□□□ -1.73
PKR1	YMR123W	SSY1	Q03770	852 aa		4.23	□□□□□ -1.73
PKR1	YMR123W	SRO9	P25567	434 aa	Known RBP	4.22	□□□□□ -1.73
PKR1	YMR123W	MDL2	P33311	773 aa		4.22	□□□□□ -1.73
PKR1	YMR123W	HSP78	P33416	811 aa		4.22	□□□□□ -1.73
PKR1	YMR123W	ALG3	P38179	458 aa		4.22	□□□□□ -1.73
PKR1	YMR123W	YHL012W	P38709	493 aa		4.22	□□□□□ -1.73
PKR1	YMR123W	ROD1	Q02805	837 aa		4.22	□□□□□ -1.73
PKR1	YMR123W	LPX1	Q12405	387 aa	Known RBP	4.22	□□□□□ -1.73
PKR1	YMR123W	PTC5	Q12511	572 aa		4.22	□□□□□ -1.73
PKR1	YMR123W	DED1	P06634	604 aa	Known RBP	4.21	□□□□□ -1.74
PKR1	YMR123W	GCR1	P07261	785 aa		4.21	□□□□□ -1.74
PKR1	YMR123W	MKK2	P32491	506 aa		4.21	□□□□□ -1.74
PKR1	YMR123W	PEP7	P32609	515 aa		4.21	□□□□□ -1.74
PKR1	YMR123W	ELM1	P32801	640 aa		4.21	□□□□□ -1.74
PKR1	YMR123W	POL12	P38121	705 aa	Predicted RBP	4.21	□□□□□ -1.74
PKR1	YMR123W	PTC7	P38797	343 aa		4.21	□□□□□ -1.74
PKR1	YMR123W	NMD3	P38861	518 aa	Known RBP	4.21	□□□□□ -1.74
PKR1	YMR123W	ECL1	P48235	211 aa		4.21	□□□□□ -1.74
PKR1	YMR123W	AOS1	Q06624	347 aa		4.21	□□□□□ -1.74
PKR1	YMR123W	MRL1	Q06815	381 aa		4.21	□□□□□ -1.74
PKR1	YMR123W	DFG16	Q99234	619 aa		4.21	□□□□□ -1.74
PKR1	YMR123W	KIP1	P28742	1111 aa		4.2	□□□□□ -1.74
PKR1	YMR123W	YSC84	P32793	468 aa		4.2	□□□□□ -1.74
PKR1	YMR123W	LRG1	P35688	1017 aa		4.2	□□□□□ -1.74
PKR1	YMR123W	AVT1	P47082	602 aa		4.2	□□□□□ -1.74
PKR1	YMR123W	RAT1	Q02792	1006 aa	Known RBP	4.2	□□□□□ -1.74
PKR1	YMR123W	RTT10	Q08924	1013 aa		4.2	□□□□□ -1.74
PKR1	YMR123W	YPL260W	Q08977	551 aa		4.2	□□□□□ -1.74
PKR1	YMR123W	SYP1	P25623	870 aa	Known RBP	4.19	□□□□□ -1.74
PKR1	YMR123W	RPN3	P40016	523 aa	Known RBP	4.19	□□□□□ -1.74
PKR1	YMR123W	GTS1	P40956	396 aa		4.19	□□□□□ -1.74
PKR1	YMR123W	TMA46	Q12000	345 aa	Known RBP	4.19	□□□□□ -1.74
PKR1	YMR123W	COQ4	O13525	335 aa		4.18	□□□□□ -1.74
PKR1	YMR123W	DBP5	P20449	482 aa	Known RBP	4.18	□□□□□ -1.74
PKR1	YMR123W	RAD27	P26793	382 aa		4.18	□□□□□ -1.74
PKR1	YMR123W	SEG2	P34250	1132 aa		4.18	□□□□□ -1.74
PKR1	YMR123W	BAP2	P38084	609 aa		4.18	□□□□□ -1.74
PKR1	YMR123W	RGD1	P38339	666 aa		4.18	□□□□□ -1.74
PKR1	YMR123W	NIT1	P40447	199 aa		4.18	□□□□□ -1.74
PKR1	YMR123W	CNN1	P43618	361 aa		4.18	□□□□□ -1.74
PKR1	YMR123W	TNA1	P53322	534 aa		4.18	□□□□□ -1.74
PKR1	YMR123W	HOS3	Q02959	697 aa	Known RBP	4.18	□□□□□ -1.74
PKR1	YMR123W	RSC58	Q07979	502 aa		4.18	□□□□□ -1.74
PKR1	YMR123W	SPO21	Q12411	609 aa		4.18	□□□□□ -1.74
PKR1	YMR123W	DUT1	P33317	147 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms