RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W THI13Q07748 340 aa6.59□□□□□ -1.35
CSM3YMR048W WHI5Q12416 295 aa6.59□□□□□ -1.35
CSM3YMR048W UGA4P32837 571 aa6.58□□□□□ -1.36
CSM3YMR048W PEX28P38848 579 aa6.58□□□□□ -1.36
CSM3YMR048W TPP1Q03796 238 aa6.58□□□□□ -1.36
CSM3YMR048W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
CSM3YMR048W PRO1P32264 428 aa6.57□□□□□ -1.36
CSM3YMR048W XKS1P42826 600 aa6.57□□□□□ -1.36
CSM3YMR048W YPL109CQ02981 657 aa6.57□□□□□ -1.36
CSM3YMR048W ADI1Q03677 179 aa6.57□□□□□ -1.36
CSM3YMR048W RKM2Q03942 479 aa6.57□□□□□ -1.36
CSM3YMR048W YLR257WQ06146 321 aaKnown RBP6.57□□□□□ -1.36
CSM3YMR048W RNQ1P25367 405 aa6.56□□□□□ -1.36
CSM3YMR048W RDH54P38086 958 aa6.56□□□□□ -1.36
CSM3YMR048W UBP5P39944 805 aa6.56□□□□□ -1.36
CSM3YMR048W RSA3Q05942 220 aaKnown RBP6.56□□□□□ -1.36
CSM3YMR048W HRK1Q08732 759 aaKnown RBP6.56□□□□□ -1.36
CSM3YMR048W SLD2P34252 453 aa6.55□□□□□ -1.36
CSM3YMR048W PTC7P38797 343 aa6.55□□□□□ -1.36
CSM3YMR048W YGL140CP53120 1219 aa6.55□□□□□ -1.36
CSM3YMR048W PRP43P53131 767 aaKnown RBP6.55□□□□□ -1.36
CSM3YMR048W LPX1Q12405 387 aaKnown RBP6.55□□□□□ -1.36
CSM3YMR048W ADD66P36040 267 aa6.54□□□□□ -1.36
CSM3YMR048W TOS4Q06266 489 aa6.54□□□□□ -1.36
CSM3YMR048W HXK1P04806 485 aaKnown RBP6.53□□□□□ -1.36
CSM3YMR048W RPT1P33299 467 aaKnown RBP6.53□□□□□ -1.36
CSM3YMR048W IPL1P38991 367 aa6.53□□□□□ -1.36
CSM3YMR048W VPS53P47061 822 aa6.53□□□□□ -1.36
CSM3YMR048W SEN54Q02825 467 aaPredicted RBP6.53□□□□□ -1.36
CSM3YMR048W SEC23P15303 768 aaKnown RBP6.52□□□□□ -1.37
CSM3YMR048W GAS1P22146 559 aaKnown RBP6.52□□□□□ -1.37
CSM3YMR048W MDL2P33311 773 aa6.52□□□□□ -1.37
CSM3YMR048W YHL012WP38709 493 aa6.52□□□□□ -1.37
CSM3YMR048W QNS1P38795 714 aaKnown RBP6.52□□□□□ -1.37
CSM3YMR048W GTS1P40956 396 aa6.52□□□□□ -1.37
CSM3YMR048W TAF13P11747 167 aa6.51□□□□□ -1.37
CSM3YMR048W SAM35P14693 329 aa6.51□□□□□ -1.37
CSM3YMR048W SRO9P25567 434 aaKnown RBP6.51□□□□□ -1.37
CSM3YMR048W FAA3P39002 694 aa6.51□□□□□ -1.37
CSM3YMR048W YNR063WP53749 607 aa6.51□□□□□ -1.37
CSM3YMR048W TSA1P34760 196 aaKnown RBP6.5□□□□□ -1.37
CSM3YMR048W HEM13P11353 328 aaKnown RBP6.49□□□□□ -1.37
CSM3YMR048W NMD3P38861 518 aaKnown RBP6.49□□□□□ -1.37
CSM3YMR048W YGR122WP53272 402 aa6.49□□□□□ -1.37
CSM3YMR048W EST2Q06163 884 aa6.49□□□□□ -1.37
CSM3YMR048W CDA2Q06703 312 aa6.49□□□□□ -1.37
CSM3YMR048W MCD1Q12158 566 aa6.49□□□□□ -1.37
CSM3YMR048W PIC2P40035 300 aa6.48□□□□□ -1.37
CSM3YMR048W MRPS18P42847 217 aa6.47□□□□□ -1.37
CSM3YMR048W YJL045WP47052 634 aa6.47□□□□□ -1.37
CSM3YMR048W FOL2P51601 243 aaKnown RBP6.47□□□□□ -1.37
CSM3YMR048W PRE9P23638 258 aaKnown RBP6.46□□□□□ -1.38
CSM3YMR048W YSC84P32793 468 aa6.46□□□□□ -1.38
CSM3YMR048W NBA1Q08229 501 aaKnown RBP6.45□□□□□ -1.38
CSM3YMR048W AFG2P32794 780 aa6.44□□□□□ -1.38
CSM3YMR048W MGE1P38523 228 aa6.44□□□□□ -1.38
CSM3YMR048W ENT3P47160 408 aa6.44□□□□□ -1.38
CSM3YMR048W ENV11P53246 860 aa6.44□□□□□ -1.38
CSM3YMR048W PRP6P19735 899 aaPredicted RBP6.43□□□□□ -1.38
CSM3YMR048W MRPL22P53881 309 aa6.43□□□□□ -1.38
CSM3YMR048W RSC58Q07979 502 aa6.43□□□□□ -1.38
CSM3YMR048W PTC5Q12511 572 aa6.43□□□□□ -1.38
CSM3YMR048W COQ4O13525 335 aa6.42□□□□□ -1.38
CSM3YMR048W RAD2P07276 1031 aa6.42□□□□□ -1.38
CSM3YMR048W KIP1P28742 1111 aa6.42□□□□□ -1.38
CSM3YMR048W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
CSM3YMR048W YDL177CQ12257 170 aa6.42□□□□□ -1.38
CSM3YMR048W CYC8P14922 966 aa6.41□□□□□ -1.38
CSM3YMR048W AIM26P32858 118 aa6.41□□□□□ -1.38
CSM3YMR048W ALG3P38179 458 aa6.41□□□□□ -1.38
CSM3YMR048W HDA2Q06629 674 aa6.41□□□□□ -1.38
CSM3YMR048W THI80P35202 319 aa6.4□□□□□ -1.38
CSM3YMR048W BAP2P38084 609 aa6.4□□□□□ -1.38
CSM3YMR048W CCZ1P38273 704 aa6.4□□□□□ -1.38
CSM3YMR048W ETP1P38748 585 aaKnown RBP6.4□□□□□ -1.38
CSM3YMR048W RPN3P40016 523 aaKnown RBP6.4□□□□□ -1.38
CSM3YMR048W POL32P47110 350 aa6.4□□□□□ -1.38
CSM3YMR048W TNA1P53322 534 aa6.4□□□□□ -1.38
CSM3YMR048W SNO2P53823 222 aa6.4□□□□□ -1.38
CSM3YMR048W SIW14P53965 281 aa6.4□□□□□ -1.38
CSM3YMR048W HOS3Q02959 697 aaKnown RBP6.4□□□□□ -1.38
CSM3YMR048W YPL260WQ08977 551 aa6.4□□□□□ -1.38
CSM3YMR048W DED1P06634 604 aaKnown RBP6.39□□□□□ -1.39
CSM3YMR048W SPS1P08458 490 aa6.39□□□□□ -1.39
CSM3YMR048W RPS26AP39938 119 aaKnown RBP6.39□□□□□ -1.39
CSM3YMR048W RPS26BP39939 119 aaKnown RBP6.39□□□□□ -1.39
CSM3YMR048W RIM8P53179 542 aa6.39□□□□□ -1.39
CSM3YMR048W YJR107WP47145 328 aa6.38□□□□□ -1.39
CSM3YMR048W ESC8Q08119 714 aa6.38□□□□□ -1.39
CSM3YMR048W YCR015CP25616 317 aa6.37□□□□□ -1.39
CSM3YMR048W HEM3P28789 327 aa6.37□□□□□ -1.39
CSM3YMR048W MKK2P32491 506 aa6.37□□□□□ -1.39
CSM3YMR048W SEC8P32855 1065 aa6.37□□□□□ -1.39
CSM3YMR048W AIM3P38266 947 aaKnown RBP6.37□□□□□ -1.39
CSM3YMR048W ROD1Q02805 837 aa6.37□□□□□ -1.39
CSM3YMR048W YML020WQ03722 664 aa6.37□□□□□ -1.39
CSM3YMR048W SOD2P00447 233 aa6.36□□□□□ -1.39
CSM3YMR048W PIK1P39104 1066 aa6.36□□□□□ -1.39
CSM3YMR048W RCL1Q08096 367 aaPredicted RBP6.36□□□□□ -1.39
CSM3YMR048W NOP8Q08287 484 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms