RNA–Protein interactions for RNA: YLR261C

VPS63, Transcript of Putative protein of unknown function, yeast

Gene VPS63, Length 327 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS63	YLR261C	DOT1	Q04089	582 aa	Known RBP	4.57	□□□□□ -1.68
VPS63	YLR261C	AVO1	Q08236	1176 aa		4.57	□□□□□ -1.68
VPS63	YLR261C	AI3	P03877	415 aa		4.56	□□□□□ -1.68
VPS63	YLR261C	RAD27	P26793	382 aa		4.56	□□□□□ -1.68
VPS63	YLR261C	NAM7	P30771	971 aa	Known RBP	4.56	□□□□□ -1.68
VPS63	YLR261C	AFG2	P32794	780 aa		4.56	□□□□□ -1.68
VPS63	YLR261C	GPT2	P36148	743 aa		4.56	□□□□□ -1.68
VPS63	YLR261C	NMD3	P38861	518 aa	Known RBP	4.56	□□□□□ -1.68
VPS63	YLR261C	SIW14	P53965	281 aa		4.56	□□□□□ -1.68
VPS63	YLR261C	MCA1	Q08601	432 aa		4.56	□□□□□ -1.68
VPS63	YLR261C	YOR223W	Q12015	292 aa		4.56	□□□□□ -1.68
VPS63	YLR261C	NAP1	P25293	417 aa	Known RBP	4.55	□□□□□ -1.68
VPS63	YLR261C	MKK2	P32491	506 aa		4.55	□□□□□ -1.68
VPS63	YLR261C	SFA1	P32771	386 aa		4.55	□□□□□ -1.68
VPS63	YLR261C	ARL1	P38116	183 aa	Known RBP	4.55	□□□□□ -1.68
VPS63	YLR261C	YAR028W	P39548	234 aa		4.55	□□□□□ -1.68
VPS63	YLR261C	YGR053C	P53234	283 aa		4.55	□□□□□ -1.68
VPS63	YLR261C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
VPS63	YLR261C	ESC2	Q06340	456 aa		4.55	□□□□□ -1.68
VPS63	YLR261C	YLL054C	Q12244	843 aa		4.55	□□□□□ -1.68
VPS63	YLR261C	BAS1	P22035	811 aa		4.54	□□□□□ -1.68
VPS63	YLR261C	RSC6	P25632	483 aa		4.54	□□□□□ -1.68
VPS63	YLR261C	MOT2	P34909	587 aa	Known RBP	4.54	□□□□□ -1.68
VPS63	YLR261C	YKL069W	P36088	180 aa		4.54	□□□□□ -1.68
VPS63	YLR261C	TAT1	P38085	619 aa		4.54	□□□□□ -1.68
VPS63	YLR261C	TRP2	P00899	507 aa	Known RBP	4.53	□□□□□ -1.68
VPS63	YLR261C	TAF13	P11747	167 aa		4.53	□□□□□ -1.68
VPS63	YLR261C	ATG14	P38270	344 aa		4.53	□□□□□ -1.68
VPS63	YLR261C	AKR1	P39010	764 aa		4.53	□□□□□ -1.68
VPS63	YLR261C	MSH4	P40965	878 aa	Predicted RBP	4.53	□□□□□ -1.68
VPS63	YLR261C	YLR225C	Q05948	407 aa	Known RBP	4.53	□□□□□ -1.68
VPS63	YLR261C	OPI10	Q08202	246 aa		4.53	□□□□□ -1.68
VPS63	YLR261C	TMA46	Q12000	345 aa	Known RBP	4.53	□□□□□ -1.68
VPS63	YLR261C	SBP1	P10080	294 aa	Known RBP	4.52	□□□□□ -1.69
VPS63	YLR261C	SYP1	P25623	870 aa	Known RBP	4.52	□□□□□ -1.69
VPS63	YLR261C	ALG3	P38179	458 aa		4.52	□□□□□ -1.69
VPS63	YLR261C	ARI1	P53111	347 aa	Known RBP	4.52	□□□□□ -1.69
VPS63	YLR261C	TYW3	P53177	273 aa		4.52	□□□□□ -1.69
VPS63	YLR261C	EAR1	Q03212	550 aa		4.52	□□□□□ -1.69
VPS63	YLR261C	TIF35	Q04067	274 aa	Known RBP	4.52	□□□□□ -1.69
VPS63	YLR261C	FAL1	Q12099	399 aa	Known RBP	4.52	□□□□□ -1.69
VPS63	YLR261C	RET1	P22276	1149 aa	Known RBP	4.51	□□□□□ -1.69
VPS63	YLR261C	NFS1	P25374	497 aa		4.51	□□□□□ -1.69
VPS63	YLR261C	LYP1	P32487	611 aa		4.51	□□□□□ -1.69
VPS63	YLR261C	ABD1	P32783	436 aa	Predicted RBP	4.51	□□□□□ -1.69
VPS63	YLR261C	RKM2	Q03942	479 aa		4.51	□□□□□ -1.69
VPS63	YLR261C	RSA3	Q05942	220 aa	Known RBP	4.51	□□□□□ -1.69
VPS63	YLR261C	YLR257W	Q06146	321 aa	Known RBP	4.51	□□□□□ -1.69
VPS63	YLR261C	AOS1	Q06624	347 aa		4.51	□□□□□ -1.69
VPS63	YLR261C	GIC2	Q06648	383 aa		4.51	□□□□□ -1.69
VPS63	YLR261C	LAP2	Q10740	671 aa		4.51	□□□□□ -1.69
VPS63	YLR261C	WRS1	Q12109	432 aa	Known RBP	4.51	□□□□□ -1.69
VPS63	YLR261C	SSF2	Q12153	453 aa	Predicted RBP	4.51	□□□□□ -1.69
VPS63	YLR261C	PTC5	Q12511	572 aa		4.51	□□□□□ -1.69
VPS63	YLR261C	RPS4A	P0CX35	261 aa	Known RBP	4.5	□□□□□ -1.69
VPS63	YLR261C	RPS4B	P0CX36	261 aa	Known RBP	4.5	□□□□□ -1.69
VPS63	YLR261C	INO1	P11986	533 aa		4.5	□□□□□ -1.69
VPS63	YLR261C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
VPS63	YLR261C	MLS1	P30952	554 aa		4.5	□□□□□ -1.69
VPS63	YLR261C	QNS1	P38795	714 aa	Known RBP	4.5	□□□□□ -1.69
VPS63	YLR261C	GPB2	P39717	880 aa		4.5	□□□□□ -1.69
VPS63	YLR261C	YPL034W	Q03083	165 aa		4.5	□□□□□ -1.69
VPS63	YLR261C	DBP5	P20449	482 aa	Known RBP	4.49	□□□□□ -1.69
VPS63	YLR261C	GRX1	P25373	110 aa	Known RBP	4.49	□□□□□ -1.69
VPS63	YLR261C	KIP1	P28742	1111 aa		4.49	□□□□□ -1.69
VPS63	YLR261C	SMY2	P32909	740 aa	Known RBP	4.49	□□□□□ -1.69
VPS63	YLR261C	WHI3	P34761	661 aa	Known RBP	4.49	□□□□□ -1.69
VPS63	YLR261C	MCM7	P38132	845 aa		4.49	□□□□□ -1.69
VPS63	YLR261C	SEA4	P38164	1038 aa		4.49	□□□□□ -1.69
VPS63	YLR261C	CNN1	P43618	361 aa		4.49	□□□□□ -1.69
VPS63	YLR261C	ENT3	P47160	408 aa		4.49	□□□□□ -1.69
VPS63	YLR261C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
VPS63	YLR261C	YPL066W	Q12194	479 aa		4.49	□□□□□ -1.69
VPS63	YLR261C	NNK1	P36003	928 aa		4.48	□□□□□ -1.69
VPS63	YLR261C	OCA5	P38738	679 aa		4.48	□□□□□ -1.69
VPS63	YLR261C	HSE1	P38753	452 aa		4.48	□□□□□ -1.69
VPS63	YLR261C	SPF1	P39986	1215 aa	Known RBP	4.48	□□□□□ -1.69
VPS63	YLR261C	NNF1	P47149	201 aa		4.48	□□□□□ -1.69
VPS63	YLR261C	TDA5	Q06417	326 aa	Known RBP	4.48	□□□□□ -1.69
VPS63	YLR261C	TAT2	P38967	592 aa		4.47	□□□□□ -1.69
VPS63	YLR261C	MPH1	P40562	993 aa		4.47	□□□□□ -1.69
VPS63	YLR261C	YGL176C	P46945	554 aa		4.47	□□□□□ -1.69
VPS63	YLR261C	YJL045W	P47052	634 aa		4.47	□□□□□ -1.69
VPS63	YLR261C	VPS53	P47061	822 aa		4.47	□□□□□ -1.69
VPS63	YLR261C	ALT1	P52893	592 aa		4.47	□□□□□ -1.69
VPS63	YLR261C	TPP1	Q03796	238 aa		4.47	□□□□□ -1.69
VPS63	YLR261C	SPO20	Q04359	397 aa		4.47	□□□□□ -1.69
VPS63	YLR261C	PUS7	Q08647	676 aa	Known RBP	4.47	□□□□□ -1.69
VPS63	YLR261C	GLT1	Q12680	2145 aa	Known RBP	4.46	□□□□□ -1.69
VPS63	YLR261C	YER152C	P10356	443 aa		4.46	□□□□□ -1.7
VPS63	YLR261C	COQ2	P32378	372 aa		4.46	□□□□□ -1.7
VPS63	YLR261C	STE5	P32917	917 aa		4.46	□□□□□ -1.7
VPS63	YLR261C	PGM1	P33401	570 aa	Known RBP	4.46	□□□□□ -1.7
VPS63	YLR261C	VBA5	P36172	582 aa		4.46	□□□□□ -1.7
VPS63	YLR261C	SAF1	P38352	637 aa		4.46	□□□□□ -1.7
VPS63	YLR261C	YFL054C	P43549	646 aa		4.46	□□□□□ -1.7
VPS63	YLR261C	YLR122C	Q12312	125 aa		4.46	□□□□□ -1.7
VPS63	YLR261C	SPO21	Q12411	609 aa		4.46	□□□□□ -1.7
VPS63	YLR261C	RGD1	P38339	666 aa		4.45	□□□□□ -1.7
VPS63	YLR261C	MBP1	P39678	833 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms