RNA–Protein interactions for RNA: YLR223C

IFH1, Transcript of Coactivator, regulates transcription of ribosomal protein (RP) genes, yeastyeast

Gene IFH1, Length 3,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IFH1YLR223C PUS7Q08647 676 aaKnown RBP2.37□□□□□ -2.03
IFH1YLR223C TY1A-GR1Q12085 440 aa2.37□□□□□ -2.03
IFH1YLR223C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.37□□□□□ -2.03
IFH1YLR223C TY1A-OLQ92392 440 aaKnown RBP2.37□□□□□ -2.03
IFH1YLR223C YKL222CP35995 705 aa2.37□□□□□ -2.03
IFH1YLR223C ARL1P38116 183 aaKnown RBP2.37□□□□□ -2.03
IFH1YLR223C EST2Q06163 884 aa2.37□□□□□ -2.03
IFH1YLR223C MNL2Q12205 849 aa2.37□□□□□ -2.03
IFH1YLR223C RAD27P26793 382 aa2.36□□□□□ -2.03
IFH1YLR223C SEG2P34250 1132 aa2.36□□□□□ -2.03
IFH1YLR223C EAR1Q03212 550 aa2.36□□□□□ -2.03
IFH1YLR223C GPI13Q07830 1017 aa2.36□□□□□ -2.03
IFH1YLR223C YVC1Q12324 675 aa2.36□□□□□ -2.03
IFH1YLR223C HVG1P0CE11 249 aa2.36□□□□□ -2.03
IFH1YLR223C RNQ1P25367 405 aa2.36□□□□□ -2.03
IFH1YLR223C NEM1P38757 446 aa2.36□□□□□ -2.03
IFH1YLR223C UGA4P32837 571 aa2.36□□□□□ -2.03
IFH1YLR223C PPX1P38698 397 aa2.36□□□□□ -2.03
IFH1YLR223C POL32P47110 350 aa2.36□□□□□ -2.03
IFH1YLR223C MRL1Q06815 381 aa2.36□□□□□ -2.03
IFH1YLR223C PTC5Q12511 572 aa2.36□□□□□ -2.03
IFH1YLR223C ETP1P38748 585 aaKnown RBP2.35□□□□□ -2.03
IFH1YLR223C UTP5Q04177 643 aaKnown RBP2.35□□□□□ -2.03
IFH1YLR223C EXO5P38289 585 aa2.35□□□□□ -2.03
IFH1YLR223C GPB2P39717 880 aa2.35□□□□□ -2.03
IFH1YLR223C DAK2P43550 591 aa2.35□□□□□ -2.03
IFH1YLR223C ALT1P52893 592 aa2.35□□□□□ -2.03
IFH1YLR223C PHO4P07270 312 aaKnown RBP2.34□□□□□ -2.03
IFH1YLR223C PRP5P21372 849 aaPredicted RBP2.34□□□□□ -2.03
IFH1YLR223C LRG1P35688 1017 aa2.34□□□□□ -2.03
IFH1YLR223C ADD66P36040 267 aa2.34□□□□□ -2.03
IFH1YLR223C CCZ1P38273 704 aa2.34□□□□□ -2.03
IFH1YLR223C RPS26AP39938 119 aaKnown RBP2.34□□□□□ -2.03
IFH1YLR223C RPS26BP39939 119 aaKnown RBP2.34□□□□□ -2.03
IFH1YLR223C OYE3P41816 400 aaPredicted RBP2.34□□□□□ -2.03
IFH1YLR223C VPS53P47061 822 aa2.34□□□□□ -2.03
IFH1YLR223C ADI1Q03677 179 aa2.34□□□□□ -2.03
IFH1YLR223C RSA3Q05942 220 aaKnown RBP2.34□□□□□ -2.03
IFH1YLR223C AOS1Q06624 347 aa2.34□□□□□ -2.03
IFH1YLR223C WHI5Q12416 295 aa2.34□□□□□ -2.03
IFH1YLR223C PUF4P25339 888 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
IFH1YLR223C UBP5P39944 805 aa2.34□□□□□ -2.03
IFH1YLR223C YJL045WP47052 634 aa2.34□□□□□ -2.03
IFH1YLR223C SEN54Q02825 467 aaPredicted RBP2.34□□□□□ -2.03
IFH1YLR223C GLT1Q12680 2145 aaKnown RBP2.34□□□□□ -2.04
IFH1YLR223C SPS1P08458 490 aa2.34□□□□□ -2.04
IFH1YLR223C MDL2P33311 773 aa2.34□□□□□ -2.04
IFH1YLR223C MCM7P38132 845 aa2.34□□□□□ -2.04
IFH1YLR223C NOP8Q08287 484 aaPredicted RBP2.34□□□□□ -2.04
IFH1YLR223C VMA4P22203 233 aaKnown RBP2.33□□□□□ -2.04
IFH1YLR223C HEM3P28789 327 aa2.33□□□□□ -2.04
IFH1YLR223C MCM2P29469 868 aa2.33□□□□□ -2.04
IFH1YLR223C QNS1P38795 714 aaKnown RBP2.33□□□□□ -2.04
IFH1YLR223C SAP155P43612 1002 aa2.33□□□□□ -2.04
IFH1YLR223C MCD1Q12158 566 aa2.33□□□□□ -2.04
IFH1YLR223C MET4P32389 672 aa2.33□□□□□ -2.04
IFH1YLR223C FAA3P39002 694 aa2.33□□□□□ -2.04
IFH1YLR223C TNA1P53322 534 aa2.33□□□□□ -2.04
IFH1YLR223C SPO21Q12411 609 aa2.33□□□□□ -2.04
IFH1YLR223C CWC24P53769 259 aa2.32□□□□□ -2.04
IFH1YLR223C OYE2Q03558 400 aaKnown RBP2.32□□□□□ -2.04
IFH1YLR223C KIP1P28742 1111 aa2.31□□□□□ -2.04
IFH1YLR223C AIM3P38266 947 aaKnown RBP2.31□□□□□ -2.04
IFH1YLR223C SPT20P50875 604 aa2.31□□□□□ -2.04
IFH1YLR223C YGL140CP53120 1219 aa2.31□□□□□ -2.04
IFH1YLR223C RSM24Q03976 319 aa2.31□□□□□ -2.04
IFH1YLR223C ATE1P16639 503 aa2.31□□□□□ -2.04
IFH1YLR223C ALG3P38179 458 aa2.31□□□□□ -2.04
IFH1YLR223C SNO2P53823 222 aa2.31□□□□□ -2.04
IFH1YLR223C ROD1Q02805 837 aa2.31□□□□□ -2.04
IFH1YLR223C YPL109CQ02981 657 aa2.31□□□□□ -2.04
IFH1YLR223C SEC8P32855 1065 aa2.3□□□□□ -2.04
IFH1YLR223C PEX7P39108 375 aa2.3□□□□□ -2.04
IFH1YLR223C NIT1P40447 199 aa2.3□□□□□ -2.04
IFH1YLR223C MRPL22P53881 309 aa2.3□□□□□ -2.04
IFH1YLR223C YSC84P32793 468 aa2.3□□□□□ -2.04
IFH1YLR223C SEA4P38164 1038 aa2.3□□□□□ -2.04
IFH1YLR223C NOG1Q02892 647 aaKnown RBP2.3□□□□□ -2.04
IFH1YLR223C SRO9P25567 434 aaKnown RBP2.3□□□□□ -2.04
IFH1YLR223C APL1P27351 700 aa2.3□□□□□ -2.04
IFH1YLR223C HOS3Q02959 697 aaKnown RBP2.3□□□□□ -2.04
IFH1YLR223C RKM2Q03942 479 aa2.3□□□□□ -2.04
IFH1YLR223C SPR28Q04921 423 aa2.3□□□□□ -2.04
IFH1YLR223C ESF1Q06344 628 aaKnown RBP2.3□□□□□ -2.04
IFH1YLR223C SPP382Q06411 708 aaPredicted RBP2.3□□□□□ -2.04
IFH1YLR223C RAD2P07276 1031 aa2.29□□□□□ -2.04
IFH1YLR223C KIN2P13186 1147 aaKnown RBP2.29□□□□□ -2.04
IFH1YLR223C ASF1P32447 279 aa2.29□□□□□ -2.04
IFH1YLR223C ELM1P32801 640 aa2.29□□□□□ -2.04
IFH1YLR223C TOD6P34219 525 aa2.29□□□□□ -2.04
IFH1YLR223C YGR122WP53272 402 aa2.29□□□□□ -2.04
IFH1YLR223C ROT1Q03691 256 aa2.29□□□□□ -2.04
IFH1YLR223C RSC58Q07979 502 aa2.29□□□□□ -2.04
IFH1YLR223C CMP2P14747 604 aa2.29□□□□□ -2.04
IFH1YLR223C MLS1P30952 554 aa2.29□□□□□ -2.04
IFH1YLR223C FYV10P40492 516 aa2.29□□□□□ -2.04
IFH1YLR223C YPL260WQ08977 551 aa2.29□□□□□ -2.04
IFH1YLR223C RAT1Q02792 1006 aaKnown RBP2.28□□□□□ -2.04
IFH1YLR223C JIP5Q06214 492 aaPredicted RBP2.28□□□□□ -2.04
IFH1YLR223C TOS4Q06266 489 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms