RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C YGL242CP53066 181 aa6.45□□□□□ -1.38
SSK1YLR006C ALO1P54783 526 aaKnown RBP6.45□□□□□ -1.38
SSK1YLR006C TIM50Q02776 476 aa6.45□□□□□ -1.38
SSK1YLR006C FRT1Q99332 602 aa6.45□□□□□ -1.38
SSK1YLR006C KRR1P25586 316 aaPredicted RBP6.44□□□□□ -1.38
SSK1YLR006C AAD3P25612 363 aa6.44□□□□□ -1.38
SSK1YLR006C GTT3P39996 337 aa6.44□□□□□ -1.38
SSK1YLR006C AIM20P40451 204 aa6.44□□□□□ -1.38
SSK1YLR006C ADE16P54113 591 aaKnown RBP6.44□□□□□ -1.38
SSK1YLR006C TGL2P54857 326 aa6.44□□□□□ -1.38
SSK1YLR006C SGD1Q06132 899 aa6.44□□□□□ -1.38
SSK1YLR006C CDC53Q12018 815 aaKnown RBP6.44□□□□□ -1.38
SSK1YLR006C PIN2Q12057 282 aa6.44□□□□□ -1.38
SSK1YLR006C RSF2P46974 1380 aa6.44□□□□□ -1.38
SSK1YLR006C RIM15P43565 1770 aa6.44□□□□□ -1.38
SSK1YLR006C CPA2P03965 1118 aaKnown RBP6.44□□□□□ -1.38
SSK1YLR006C SUP45P12385 437 aaKnown RBP6.44□□□□□ -1.38
SSK1YLR006C APL2P36000 726 aaPredicted RBP6.44□□□□□ -1.38
SSK1YLR006C TGL4P36165 910 aa6.44□□□□□ -1.38
SSK1YLR006C KTR3P38130 404 aaPredicted RBP6.44□□□□□ -1.38
SSK1YLR006C HXT10P43581 546 aa6.44□□□□□ -1.38
SSK1YLR006C YNL108CP53929 270 aa6.44□□□□□ -1.38
SSK1YLR006C VMS1Q04311 632 aaKnown RBP6.44□□□□□ -1.38
SSK1YLR006C MRX10Q05648 414 aa6.44□□□□□ -1.38
SSK1YLR006C PGA3Q12746 312 aaKnown RBP6.44□□□□□ -1.38
SSK1YLR006C NAT1P12945 854 aaKnown RBP6.43□□□□□ -1.38
SSK1YLR006C MBR1P23493 339 aa6.43□□□□□ -1.38
SSK1YLR006C SAS3P34218 831 aa6.43□□□□□ -1.38
SSK1YLR006C MTC2P34246 357 aa6.43□□□□□ -1.38
SSK1YLR006C MNR2P35724 969 aa6.43□□□□□ -1.38
SSK1YLR006C NPR3P38742 1146 aa6.43□□□□□ -1.38
SSK1YLR006C DOT6P40059 670 aaKnown RBP6.43□□□□□ -1.38
SSK1YLR006C YJL049WP47048 450 aa6.43□□□□□ -1.38
SSK1YLR006C PIB2P53191 635 aa6.43□□□□□ -1.38
SSK1YLR006C FRK1Q03002 865 aaPredicted RBP6.43□□□□□ -1.38
SSK1YLR006C RMT2Q03305 412 aa6.43□□□□□ -1.38
SSK1YLR006C SSK22P25390 1331 aaPredicted RBP6.43□□□□□ -1.38
SSK1YLR006C OSM1P21375 501 aaKnown RBP6.43□□□□□ -1.38
SSK1YLR006C PBY1P38254 753 aa6.43□□□□□ -1.38
SSK1YLR006C CIC1P38779 376 aaKnown RBP6.43□□□□□ -1.38
SSK1YLR006C NDE1P40215 560 aa6.43□□□□□ -1.38
SSK1YLR006C YBP2P53169 641 aa6.43□□□□□ -1.38
SSK1YLR006C HOS3Q02959 697 aaKnown RBP6.43□□□□□ -1.38
SSK1YLR006C UTP13Q05946 817 aaKnown RBP6.43□□□□□ -1.38
SSK1YLR006C ATG13Q06628 738 aa6.43□□□□□ -1.38
SSK1YLR006C ETT1Q08421 412 aaKnown RBP6.43□□□□□ -1.38
SSK1YLR006C ENO1P00924 437 aaKnown RBP6.42□□□□□ -1.38
SSK1YLR006C MAK11P20484 414 aaKnown RBP6.42□□□□□ -1.38
SSK1YLR006C MET4P32389 672 aa6.42□□□□□ -1.38
SSK1YLR006C CRP1P38845 465 aaKnown RBP6.42□□□□□ -1.38
SSK1YLR006C NOP14Q99207 810 aaKnown RBP6.42□□□□□ -1.38
SSK1YLR006C RDS1P25611 832 aa6.41□□□□□ -1.38
SSK1YLR006C VPS41P38959 992 aa6.41□□□□□ -1.38
SSK1YLR006C RRP8P38961 392 aaKnown RBP6.41□□□□□ -1.38
SSK1YLR006C NUP82P40368 713 aa6.41□□□□□ -1.38
SSK1YLR006C SPO22P40511 975 aa6.41□□□□□ -1.38
SSK1YLR006C YJR120WP47157 116 aa6.41□□□□□ -1.38
SSK1YLR006C YDR286CQ05530 114 aa6.41□□□□□ -1.38
SSK1YLR006C YOL087CQ99247 1116 aa6.41□□□□□ -1.38
SSK1YLR006C SUP35P05453 685 aaKnown RBP6.41□□□□□ -1.38
SSK1YLR006C PET123P17558 318 aa6.41□□□□□ -1.38
SSK1YLR006C MSM1P22438 575 aa6.41□□□□□ -1.38
SSK1YLR006C VPH1P32563 840 aaKnown RBP6.41□□□□□ -1.38
SSK1YLR006C RRF1P38771 230 aa6.41□□□□□ -1.38
SSK1YLR006C STU2P46675 888 aa6.41□□□□□ -1.38
SSK1YLR006C FCP1Q03254 732 aa6.41□□□□□ -1.38
SSK1YLR006C UTP14Q04500 899 aaKnown RBP6.41□□□□□ -1.38
SSK1YLR006C ELG1Q12050 791 aa6.41□□□□□ -1.38
SSK1YLR006C ELM1P32801 640 aa6.4□□□□□ -1.38
SSK1YLR006C TIM23P32897 222 aa6.4□□□□□ -1.38
SSK1YLR006C RRN3P36070 627 aa6.4□□□□□ -1.38
SSK1YLR006C MXR1P40029 184 aa6.4□□□□□ -1.38
SSK1YLR006C SMD2Q06217 110 aaKnown RBP6.4□□□□□ -1.38
SSK1YLR006C MSB4Q12317 492 aa6.4□□□□□ -1.38
SSK1YLR006C CDC31P06704 161 aaKnown RBP6.4□□□□□ -1.39
SSK1YLR006C HIR1P32479 840 aa6.4□□□□□ -1.39
SSK1YLR006C YER130CP39959 443 aa6.4□□□□□ -1.39
SSK1YLR006C GCD10P41814 478 aa6.4□□□□□ -1.39
SSK1YLR006C SND1Q04007 877 aa6.4□□□□□ -1.39
SSK1YLR006C SFI1Q12369 946 aa6.4□□□□□ -1.39
SSK1YLR006C CIT1P00890 479 aa6.39□□□□□ -1.39
SSK1YLR006C ATP4P05626 244 aa6.39□□□□□ -1.39
SSK1YLR006C CAJ1P39101 391 aa6.39□□□□□ -1.39
SSK1YLR006C YKE2P52553 114 aa6.39□□□□□ -1.39
SSK1YLR006C HUL5P53119 910 aa6.39□□□□□ -1.39
SSK1YLR006C RNH1Q04740 348 aa6.39□□□□□ -1.39
SSK1YLR006C YLR352WQ06479 807 aa6.39□□□□□ -1.39
SSK1YLR006C FAS2P19097 1887 aaKnown RBP6.39□□□□□ -1.39
SSK1YLR006C INH1P01097 85 aa6.38□□□□□ -1.39
SSK1YLR006C AI2P03876 854 aa6.38□□□□□ -1.39
SSK1YLR006C MSH2P25847 964 aa6.38□□□□□ -1.39
SSK1YLR006C IMP2'P32351 346 aa6.38□□□□□ -1.39
SSK1YLR006C YBL036CP38197 257 aa6.38□□□□□ -1.39
SSK1YLR006C RFC5P38251 354 aa6.38□□□□□ -1.39
SSK1YLR006C EXO84P38261 753 aa6.38□□□□□ -1.39
SSK1YLR006C EPS1P40557 701 aa6.38□□□□□ -1.39
SSK1YLR006C PEX21P50091 288 aa6.38□□□□□ -1.39
SSK1YLR006C SSP2Q08646 371 aa6.38□□□□□ -1.39
SSK1YLR006C DPH6Q12429 685 aa6.38□□□□□ -1.39
SSK1YLR006C GPA1P08539 472 aa6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms